RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 KCNK12Q9HB15 430 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 ABCB9Q9NP78 766 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 PRDM7Q9NQW5 492 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 TM7SF3Q9NS93 570 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 ZCCHC3Q9NUD5 404 aaKnown RBP4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 ZNF221Q9UK13 617 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 CES1P1Q9UKY3 287 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 ACSL5Q9ULC5 683 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 KLHL20Q9Y2M5 609 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 ASB4Q9Y574 426 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 N6AMT1Q9Y5N5 214 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 A0A0C4DFX4 3053 aa4.88□□□□□ -1.63
ATPAF1-212ENST00000542495 TRDV1A0A1B0GX56 115 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 A0A1W2PQL4 384 aaPredicted RBP4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 A0A1W2PR48 441 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 FAM172BPA6NC97 362 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 OTOL1A6NHN0 477 aaPredicted RBP4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 C4orf51C9J302 202 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 POLR1CO15160 346 aaPredicted RBP4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 PPM1DO15297 605 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 RGS5O15539 181 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 SH3BP5O60239 455 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 UBXN7O94888 489 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 ALPPP05187 535 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 KRT8P05787 483 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 CSF3P09919 207 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 CLEC2LP0C7M8 214 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 LIMS3P0CW19 117 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 LIMS4P0CW20 117 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 PTBP1P26599 531 aaKnown RBP eCLIP4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 NTSP30990 170 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 GABRA5P31644 462 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 SSR2P43308 183 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 OMPP47874 163 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 ANXA11P50995 505 aaKnown RBP4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 NCBP2P52298 156 aaKnown RBP eCLIP4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 RPS25P62851 125 aaKnown RBP4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 PRR20EP86478 221 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 PRR20CP86479 221 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 PRR20DP86480 221 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 PRR20BP86481 221 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 PRR20AP86496 221 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 DUSP2Q05923 314 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 SCN1BQ07699 218 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 ACSM1Q08AH1 577 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 TSPAN31Q12999 210 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 HNRNPA0Q13151 305 aaKnown RBP4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 ZNF234Q14588 700 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 GPR19Q15760 415 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 MLF2Q15773 248 aaPredicted RBP4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 SNAPC1Q16533 368 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 WSCD2Q2TBF2 565 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 SLC35F1Q5T1Q4 408 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 ARMC4Q5T2S8 1044 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 AADACL4Q5VUY2 407 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 RSBN1Q5VWQ0 802 aaPredicted RBP4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 C22orf42Q6IC83 251 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 BHLHB9Q6PI77 547 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 SLC36A4Q6YBV0 504 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 ZNF730Q6ZMV8 503 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 RASSF6Q6ZTQ3 369 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 OLIG3Q7RTU3 272 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 SLC7A5P1Q8MH63 180 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 ARIH2OSQ8N7S6 290 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 Q8N9G6 341 aaPredicted RBP4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 POGLUT1Q8NBL1 392 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 OR56A1Q8NGH5 318 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 OR8D4Q8NGM9 314 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 OR2L8Q8NGY9 312 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 POF1BQ8WVV4 589 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 ING5Q8WYH8 240 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 DIO2Q92813 273 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 MS4A6EQ96DS6 147 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 RNFT2Q96EX2 444 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 CNRIP1Q96F85 164 aaPredicted RBP4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 RNF170Q96K19 258 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 KCTD7Q96MP8 289 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 ZNF681Q96N22 645 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 ZNF649Q9BS31 505 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 KATNB1Q9BVA0 655 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 FAIM2Q9BWQ8 316 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 JAM3Q9BX67 310 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 LGR4Q9BXB1 951 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 SLC22A4Q9H015 551 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 SLC38A1Q9H2H9 487 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 KLHL31Q9H511 634 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 SYNDIG1Q9H7V2 258 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 PRSS16Q9NQE7 514 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 DEC1Q9P2X7 70 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 TRPC4Q9UBN4 977 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 LIPT1Q9Y234 373 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 EXOGQ9Y2C4 368 aaKnown RBP4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 CARD8Q9Y2G2 431 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 RBMX2Q9Y388 322 aaKnown RBP4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 EXOSC1Q9Y3B2 195 aaKnown RBP4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 CHST2Q9Y4C5 530 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 INSL6Q9Y581 213 aa4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 SPIN1Q9Y657 262 aaPredicted RBP4.87□□□□□ -1.63
ATPAF1-212ENST00000542495 MEIOCA2RUB1 952 aa4.86□□□□□ -1.63
ATPAF1-212ENST00000542495 IGLON5A6NGN9 336 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms