RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 SCRG1O75711 98 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 HPRP00739 348 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 ALBP02768 609 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 ALPPP05187 535 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 LYNP07948 512 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 GNAO1P09471 354 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 IFI6P09912 130 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 ZNF883P0CG24 379 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 RHCEP18577 417 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 FUT4P22083 530 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 EMDP50402 254 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 ZNF155Q12901 538 aaPredicted RBP10.25□□□□□ -0.77
SCG3-202ENST00000542355 GPR68Q15743 365 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 TM4SF20Q53R12 229 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 RHBDD2Q6NTF9 364 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 PWWP2BQ6NUJ5 590 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 FIGNL1Q6PIW4 674 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 UGT2A3Q6UWM9 527 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 B3GNT8Q7Z7M8 397 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 LAPTM4BQ86VI4 370 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 VRK2Q86Y07 508 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 LACC1Q8IV20 430 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 SLITRK4Q8IW52 837 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 CHERPQ8IWX8 916 aaKnown RBP10.25□□□□□ -0.77
SCG3-202ENST00000542355 COX18Q8N8Q8 333 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 TSLPQ969D9 159 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 CLIP3Q96DZ5 547 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 STACQ99469 402 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 EPYCQ99645 322 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 ANKRD60Q9BZ19 345 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 TOR3AQ9H497 397 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 MTHFD2LQ9H903 347 aaPredicted RBP10.25□□□□□ -0.77
SCG3-202ENST00000542355 APMAPQ9HDC9 416 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 DUSP22Q9NRW4 184 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 PNO1Q9NRX1 252 aaKnown RBP10.25□□□□□ -0.77
SCG3-202ENST00000542355 USE1Q9NZ43 259 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 ZNF69Q9UC07 566 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 SRPK3Q9UPE1 567 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 ERVK-19Q9WJR5 959 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 WDR45Q9Y484 360 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 LYVE1Q9Y5Y7 322 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 PRSS47A8MTI9 375 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 A8MUA0 341 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 C17orf105B2RV13 164 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 D6RAR5 112 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 M0R3H8 397 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 SEMA7AO75326 666 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 DNAJB5O75953 348 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 EPPINO95925 133 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 PABPC4LP0CB38 370 aaKnown RBP10.25□□□□□ -0.77
SCG3-202ENST00000542355 CSTF2P33240 577 aaKnown RBP eCLIP10.25□□□□□ -0.77
SCG3-202ENST00000542355 CAPGP40121 348 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 MAP3K8P41279 467 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 DAPP51397 102 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 CHN2P52757 468 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 IL1RL1Q01638 556 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 BIKQ13323 160 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 SF3A2Q15428 464 aaKnown RBP10.25□□□□□ -0.77
SCG3-202ENST00000542355 EXOSC6Q5RKV6 272 aaKnown RBP10.25□□□□□ -0.77
SCG3-202ENST00000542355 DCST2Q5T1A1 773 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 TYW3Q6IPR3 259 aaKnown RBP10.25□□□□□ -0.77
SCG3-202ENST00000542355 TCTN3Q6NUS6 607 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 DEF8Q6ZN54 512 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 FRRS1Q6ZNA5 592 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 MED25Q71SY5 747 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 GALNT5Q7Z7M9 940 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 CYP4Z1Q86W10 505 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 OR52P1PQ8NH57 321 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 NRBF2Q96F24 287 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 FBXL20Q96IG2 436 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 PINK1Q9BXM7 581 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 C11orf16Q9NQ32 467 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 FBXO34Q9NWN3 711 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 MMACHCQ9Y4U1 282 aa10.25□□□□□ -0.77
SCG3-202ENST00000542355 DSPPQ9NZW4 1301 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 GXYLT2A0PJZ3 443 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 FFAR1O14842 300 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 SMAD7O15105 426 aaKnown RBP10.24□□□□□ -0.77
SCG3-202ENST00000542355 FLRT2O43155 660 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 GDF9O60383 454 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 STX11O75558 287 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 GADD45GO95257 159 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 LGI1O95970 557 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 RFX3P48380 749 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 EFNA3P52797 238 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 PSG6Q00889 435 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 ZNHIT3Q15649 155 aaPredicted RBP10.24□□□□□ -0.77
SCG3-202ENST00000542355 NSDHLQ15738 373 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 CLPPQ16740 277 aaPredicted RBP10.24□□□□□ -0.77
SCG3-202ENST00000542355 C1QTNF12Q5T7M4 302 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 KRT80Q6KB66 452 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 QSOX2Q6ZRP7 698 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 SHISA6Q6ZSJ9 500 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 PPP1R3BQ86XI6 285 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 ATG16L2Q8NAA4 619 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 CHDHQ8NE62 594 aaPredicted RBP10.24□□□□□ -0.77
SCG3-202ENST00000542355 PTPMT1Q8WUK0 201 aaPredicted RBP10.24□□□□□ -0.77
SCG3-202ENST00000542355 CTRCQ99895 268 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 OR10A5Q9H207 317 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 OCEL1Q9H607 264 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms