RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 OR52B2Q96RD2 323 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 YIPF4Q9BSR8 244 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 DUSP26Q9BV47 211 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 UBQLN3Q9H347 655 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 ZNF703Q9H7S9 590 aaPredicted RBP8.9□□□□□ -0.98
YBX3-212ENST00000542002 ARGLU1Q9NWB6 273 aaPredicted RBP8.9□□□□□ -0.98
YBX3-212ENST00000542002 FBXO34Q9NWN3 711 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 SPRR3Q9UBC9 169 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 GPR45Q9Y5Y3 372 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 KCNE3Q9Y6H6 103 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 POLEQ07864 2286 aa8.9□□□□□ -0.98
YBX3-212ENST00000542002 ESPL1Q14674 2120 aa8.9□□□□□ -0.99
YBX3-212ENST00000542002 A1L4Q6 167 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 HMGB1P1B2RPK0 211 aaPredicted RBP8.89□□□□□ -0.99
YBX3-212ENST00000542002 CCL21O00585 134 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 GNB5O14775 395 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 EMC8O43402 210 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 FADS1O60427 444 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 COQ9O75208 318 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 NKX2-2O95096 273 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 SNX4O95219 450 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 ACP2P11117 423 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 CYP4B1P13584 511 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 PTPN6P29350 595 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 GPC1P35052 558 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 PTGS2P35354 604 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 ZFP36L2P47974 494 aaKnown RBP8.89□□□□□ -0.99
YBX3-212ENST00000542002 TRPC1P48995 793 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 TMED10P49755 219 aaKnown RBP8.89□□□□□ -0.99
YBX3-212ENST00000542002 PNLIPRP2P54317 469 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 ADORA2A-AS1P86434 159 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 MAD2L1Q13257 205 aaPredicted RBP8.89□□□□□ -0.99
YBX3-212ENST00000542002 DUSP5Q16690 384 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 CYP27C1Q4G0S4 372 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 GXYLT1Q4G148 440 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 TIGD3Q6B0B8 471 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 OR5M10Q6IEU7 315 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 OGFOD2Q6N063 350 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 MFSD12Q6NUT3 480 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 TMEM81Q6P7N7 255 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 APOOLQ6UXV4 268 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 ZAR1Q86SH2 424 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 PACS2Q86VP3 889 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 TRIM42Q8IWZ5 723 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 LRRC34Q8IZ02 419 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 RPRMLQ8N4K4 120 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 MARVELD2Q8N4S9 558 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 FBXO30Q8TB52 745 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 FAM57AQ8TBR7 257 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 PIWIL2Q8TC59 973 aaKnown RBP8.89□□□□□ -0.99
YBX3-212ENST00000542002 FAM110BQ8TC76 370 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 CCDC120Q96HB5 630 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 TMEM41AQ96HV5 264 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 MARK4Q96L34 752 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 BHLHE41Q9C0J9 482 aaPredicted RBP8.89□□□□□ -0.99
YBX3-212ENST00000542002 SLC6A15Q9H2J7 730 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 ACKR4Q9NPB9 350 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 RYDENQ9NUL5 291 aaKnown RBP8.89□□□□□ -0.99
YBX3-212ENST00000542002 GPATCH2Q9NW75 528 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 CBLCQ9ULV8 474 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 OR10H1Q9Y4A9 318 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 SNX8Q9Y5X2 465 aa8.89□□□□□ -0.99
YBX3-212ENST00000542002 ASH1LQ9NR48 2969 aaKnown RBP8.89□□□□□ -0.99
YBX3-212ENST00000542002 A0A1B0GUH1 482 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 PRAMEF25A6NGN4 478 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 NPIPA2E9PIF3 369 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 NPIPA3F8WFD2 350 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 ACOT7O00154 380 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 SUSD5O60279 629 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 IL33O95760 270 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 HMGN2P05204 90 aaKnown RBP8.88□□□□□ -0.99
YBX3-212ENST00000542002 CD1EP15812 388 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 ABOP16442 354 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 COL8A1P27658 744 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 RPL3P39023 403 aaKnown RBP8.88□□□□□ -0.99
YBX3-212ENST00000542002 CCT3P49368 545 aaKnown RBP8.88□□□□□ -0.99
YBX3-212ENST00000542002 MAN2A2P49641 1150 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 DGKQP52824 942 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 PPP2R2AP63151 447 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 MRPS22P82650 360 aaKnown RBP8.88□□□□□ -0.99
YBX3-212ENST00000542002 RBPJQ06330 500 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 SNTA1Q13424 505 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.88□□□□□ -0.992e-9■■□□□ 14.4
YBX3-212ENST00000542002 LSM12Q3MHD2 195 aaKnown RBP8.88□□□□□ -0.99
YBX3-212ENST00000542002 EIPR1Q53HC9 387 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 SPANXN4Q5MJ08 99 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 TBCELQ5QJ74 424 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 SLC30A6Q6NXT4 461 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 ARHGAP11AQ6P4F7 1023 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 EPGNQ6UW88 154 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 ANGPTL8Q6UXH0 198 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 SPATA19Q7Z5L4 167 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 ANKRD46Q86W74 232 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 OR8J2Q8NGG1 315 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 OR5M9Q8NGP3 310 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 OR4C3Q8NH37 302 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 OR5AK3PQ8NH89 298 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 CEP70Q8NHQ1 597 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 ZFP28Q8NHY6 868 aa8.88□□□□□ -0.99
YBX3-212ENST00000542002 GPR151Q8TDV0 419 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms