RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 KLHL21Q9UJP4 597 aa8.37□□□□□ -1.07
YBX3-211ENST00000541351 ZNF337Q9Y3M9 751 aa8.37□□□□□ -1.07
YBX3-211ENST00000541351 PLCE1Q9P212 2302 aa8.36□□□□□ -1.07
YBX3-211ENST00000541351 CTAGE15A4D2H0 777 aa8.36□□□□□ -1.07
YBX3-211ENST00000541351 EIF1AYO14602 144 aaKnown RBP8.36□□□□□ -1.07
YBX3-211ENST00000541351 LY6HO94772 140 aa8.36□□□□□ -1.07
YBX3-211ENST00000541351 ADAP00813 363 aa8.36□□□□□ -1.07
YBX3-211ENST00000541351 IFNB1P01574 187 aa8.36□□□□□ -1.07
YBX3-211ENST00000541351 GGT1P19440 569 aa8.36□□□□□ -1.07
YBX3-211ENST00000541351 AGTR1P30556 359 aa8.36□□□□□ -1.07
YBX3-211ENST00000541351 SSTR4P31391 388 aa8.36□□□□□ -1.07
YBX3-211ENST00000541351 CTNNA1P35221 906 aaKnown RBP8.36□□□□□ -1.07
YBX3-211ENST00000541351 MARCKSL1P49006 195 aa8.36□□□□□ -1.07
YBX3-211ENST00000541351 GDF10P55107 478 aa8.36□□□□□ -1.07
YBX3-211ENST00000541351 B3GALT5-AS1P59052 145 aa8.36□□□□□ -1.07
YBX3-211ENST00000541351 IL2P60568 153 aa8.36□□□□□ -1.07
YBX3-211ENST00000541351 RASGEF1BQ0VAM2 473 aa8.36□□□□□ -1.07
YBX3-211ENST00000541351 LAPTM5Q13571 262 aa8.36□□□□□ -1.07
YBX3-211ENST00000541351 NR1I3Q14994 352 aa8.36□□□□□ -1.07
YBX3-211ENST00000541351 MORF4L2Q15014 288 aa8.36□□□□□ -1.07
YBX3-211ENST00000541351 RNPS1Q15287 305 aaKnown RBP8.36□□□□□ -1.07
YBX3-211ENST00000541351 ZSWIM7Q19AV6 140 aa8.36□□□□□ -1.07
YBX3-211ENST00000541351 C11orf63Q6NUN7 778 aa8.36□□□□□ -1.07
YBX3-211ENST00000541351 DGAT2L6Q6ZPD8 337 aa8.36□□□□□ -1.07
YBX3-211ENST00000541351 SLC46A3Q7Z3Q1 461 aa8.36□□□□□ -1.07
YBX3-211ENST00000541351 CTAGE6Q86UF2 777 aa8.36□□□□□ -1.07
YBX3-211ENST00000541351 WDR75Q8IWA0 830 aaKnown RBP8.36□□□□□ -1.07
YBX3-211ENST00000541351 CCDC89Q8N998 374 aa8.36□□□□□ -1.07
YBX3-211ENST00000541351 UBE2E3Q969T4 207 aa8.36□□□□□ -1.07
YBX3-211ENST00000541351 NXNL1Q96CM4 212 aa8.36□□□□□ -1.07
YBX3-211ENST00000541351 LINGO1Q96FE5 620 aa8.36□□□□□ -1.07
YBX3-211ENST00000541351 SOX7Q9BT81 388 aa8.36□□□□□ -1.07
YBX3-211ENST00000541351 NXF5Q9H1B4 397 aaKnown RBP8.36□□□□□ -1.07
YBX3-211ENST00000541351 HSD3B7Q9H2F3 369 aa8.36□□□□□ -1.07
YBX3-211ENST00000541351 EHD1Q9H4M9 534 aa8.36□□□□□ -1.07
YBX3-211ENST00000541351 CXorf21Q9HAI6 301 aa8.36□□□□□ -1.07
YBX3-211ENST00000541351 TIGARQ9NQ88 270 aa8.36□□□□□ -1.07
YBX3-211ENST00000541351 PAK5Q9P286 719 aa8.36□□□□□ -1.07
YBX3-211ENST00000541351 SOX13Q9UN79 622 aa8.36□□□□□ -1.07
YBX3-211ENST00000541351 MED16Q9Y2X0 877 aa8.36□□□□□ -1.07
YBX3-211ENST00000541351 PRR14LQ5THK1 2151 aa8.36□□□□□ -1.07
YBX3-211ENST00000541351 KMT2CQ8NEZ4 4911 aaKnown RBP8.35□□□□□ -1.07
YBX3-211ENST00000541351 A0A1B0GUS0 222 aa8.35□□□□□ -1.07
YBX3-211ENST00000541351 CLGNO14967 610 aa8.35□□□□□ -1.07
YBX3-211ENST00000541351 SHOX2O60902 331 aaPredicted RBP8.35□□□□□ -1.07
YBX3-211ENST00000541351 UGT2B11O75310 529 aa8.35□□□□□ -1.07
YBX3-211ENST00000541351 PRKRAO75569 313 aaKnown RBP8.35□□□□□ -1.07
YBX3-211ENST00000541351 PNPP00491 289 aa8.35□□□□□ -1.07
YBX3-211ENST00000541351 ANPEPP15144 967 aa8.35□□□□□ -1.07
YBX3-211ENST00000541351 GPX3P22352 226 aa8.35□□□□□ -1.07
YBX3-211ENST00000541351 PIK3R1P27986 724 aa8.35□□□□□ -1.07
YBX3-211ENST00000541351 IL12BP29460 328 aa8.35□□□□□ -1.07
YBX3-211ENST00000541351 SERPINB1P30740 379 aa8.35□□□□□ -1.07
YBX3-211ENST00000541351 KHKP50053 298 aa8.35□□□□□ -1.07
YBX3-211ENST00000541351 CLDN20P56880 219 aa8.35□□□□□ -1.07
YBX3-211ENST00000541351 CRADDP78560 199 aa8.35□□□□□ -1.07
YBX3-211ENST00000541351 SARNPP82979 210 aaKnown RBP8.35□□□□□ -1.07
YBX3-211ENST00000541351 KIF5AQ12840 1032 aa8.35□□□□□ -1.07
YBX3-211ENST00000541351 SLAMF1Q13291 335 aa8.35□□□□□ -1.07
YBX3-211ENST00000541351 C4orf22Q6V702 233 aa8.35□□□□□ -1.07
YBX3-211ENST00000541351 TFAP2EQ6VUC0 442 aa8.35□□□□□ -1.07
YBX3-211ENST00000541351 THSD4Q6ZMP0 1018 aa8.35□□□□□ -1.07
YBX3-211ENST00000541351 SLCO4C1Q6ZQN7 724 aa8.35□□□□□ -1.07
YBX3-211ENST00000541351 C17orf107Q6ZR85 190 aa8.35□□□□□ -1.07
YBX3-211ENST00000541351 Q6ZT83 130 aa8.35□□□□□ -1.07
YBX3-211ENST00000541351 ATG4DQ86TL0 474 aaPredicted RBP8.35□□□□□ -1.07
YBX3-211ENST00000541351 OR51F2Q8NH61 342 aa8.35□□□□□ -1.07
YBX3-211ENST00000541351 SORCS2Q96PQ0 1159 aa8.35□□□□□ -1.07
YBX3-211ENST00000541351 SNX18Q96RF0 628 aa8.35□□□□□ -1.07
YBX3-211ENST00000541351 F2RL3Q96RI0 385 aa8.35□□□□□ -1.07
YBX3-211ENST00000541351 HBEGFQ99075 208 aa8.35□□□□□ -1.07
YBX3-211ENST00000541351 EGFL8Q99944 293 aa8.35□□□□□ -1.07
YBX3-211ENST00000541351 VRK1Q99986 396 aaPredicted RBP8.35□□□□□ -1.07
YBX3-211ENST00000541351 LRRC1Q9BTT6 524 aa8.35□□□□□ -1.07
YBX3-211ENST00000541351 EFCAB11Q9BUY7 163 aa8.35□□□□□ -1.07
YBX3-211ENST00000541351 SLC52A3Q9NQ40 469 aa8.35□□□□□ -1.07
YBX3-211ENST00000541351 FBXO6Q9NRD1 293 aaPredicted RBP8.35□□□□□ -1.07
YBX3-211ENST00000541351 LYARQ9NX58 379 aaKnown RBP8.35□□□□□ -1.07
YBX3-211ENST00000541351 PRODH2Q9UF12 536 aa8.35□□□□□ -1.07
YBX3-211ENST00000541351 ING1Q9UK53 422 aaPredicted RBP8.35□□□□□ -1.07
YBX3-211ENST00000541351 ATP23Q9Y6H3 246 aa8.35□□□□□ -1.07
YBX3-211ENST00000541351 TRAV20A0A0B4J274 112 aa8.34□□□□□ -1.07
YBX3-211ENST00000541351 OR2M5A3KFT3 312 aa8.34□□□□□ -1.07
YBX3-211ENST00000541351 H0YC42 278 aa8.34□□□□□ -1.07
YBX3-211ENST00000541351 KERAO60938 352 aa8.34□□□□□ -1.07
YBX3-211ENST00000541351 REM1O75628 298 aa8.34□□□□□ -1.07
YBX3-211ENST00000541351 WDR47O94967 919 aa8.34□□□□□ -1.07
YBX3-211ENST00000541351 STAMBPO95630 424 aa8.34□□□□□ -1.07
YBX3-211ENST00000541351 CLPSP04118 112 aa8.34□□□□□ -1.07
YBX3-211ENST00000541351 MSMBP08118 114 aa8.34□□□□□ -1.07
YBX3-211ENST00000541351 NR2F6P10588 404 aa8.34□□□□□ -1.07
YBX3-211ENST00000541351 EPB42P16452 691 aa8.34□□□□□ -1.07
YBX3-211ENST00000541351 CD22P20273 847 aa8.34□□□□□ -1.07
YBX3-211ENST00000541351 ME2P23368 584 aa8.34□□□□□ -1.07
YBX3-211ENST00000541351 CD40P25942 277 aa8.34□□□□□ -1.07
YBX3-211ENST00000541351 MGAT1P26572 445 aa8.34□□□□□ -1.07
YBX3-211ENST00000541351 CLK3P49761 638 aaKnown RBP8.34□□□□□ -1.07
YBX3-211ENST00000541351 RAP1GDS1P52306 607 aa8.34□□□□□ -1.07
YBX3-211ENST00000541351 ARFIP1P53367 373 aa8.34□□□□□ -1.07
YBX3-211ENST00000541351 TPD52P55327 224 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms