RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 SSX1Q16384 188 aa9.8□□□□□ -0.84
CHFR-219ENST00000541341 TATDN3Q17R31 274 aa9.8□□□□□ -0.84
CHFR-219ENST00000541341 PTCHD3Q3KNS1 767 aa9.8□□□□□ -0.84
CHFR-219ENST00000541341 XKR6Q5GH73 641 aa9.8□□□□□ -0.84
CHFR-219ENST00000541341 SNAP47Q5SQN1 464 aa9.8□□□□□ -0.84
CHFR-219ENST00000541341 C9orf64Q5T6V5 341 aa9.8□□□□□ -0.84
CHFR-219ENST00000541341 SAXO2Q658L1 398 aa9.8□□□□□ -0.84
CHFR-219ENST00000541341 MED27Q6P2C8 311 aa9.8□□□□□ -0.84
CHFR-219ENST00000541341 FAM151BQ6UXP7 276 aa9.8□□□□□ -0.84
CHFR-219ENST00000541341 NLGN4XQ8N0W4 816 aa9.8□□□□□ -0.84
CHFR-219ENST00000541341 Q8N402 240 aa9.8□□□□□ -0.84
CHFR-219ENST00000541341 YIPF7Q8N8F6 280 aa9.8□□□□□ -0.84
CHFR-219ENST00000541341 AQP11Q8NBQ7 271 aa9.8□□□□□ -0.84
CHFR-219ENST00000541341 FBXO15Q8NCQ5 510 aaPredicted RBP9.8□□□□□ -0.84
CHFR-219ENST00000541341 OR2A12Q8NGT7 310 aa9.8□□□□□ -0.84
CHFR-219ENST00000541341 WDR20Q8TBZ3 569 aa9.8□□□□□ -0.84
CHFR-219ENST00000541341 SNAPC3Q92966 411 aa9.8□□□□□ -0.84
CHFR-219ENST00000541341 PPCDCQ96CD2 204 aa9.8□□□□□ -0.84
CHFR-219ENST00000541341 APIPQ96GX9 242 aa9.8□□□□□ -0.84
CHFR-219ENST00000541341 UBL7Q96S82 380 aaPredicted RBP9.8□□□□□ -0.84
CHFR-219ENST00000541341 TTYH2Q9BSA4 534 aa9.8□□□□□ -0.84
CHFR-219ENST00000541341 CPEB1Q9BZB8 566 aaKnown RBP9.8□□□□□ -0.84
CHFR-219ENST00000541341 ROGDIQ9GZN7 287 aa9.8□□□□□ -0.84
CHFR-219ENST00000541341 BTBD1Q9H0C5 482 aa9.8□□□□□ -0.84
CHFR-219ENST00000541341 POLR2J3Q9H1A7 115 aaKnown RBP9.8□□□□□ -0.84
CHFR-219ENST00000541341 RANGRFQ9HD47 186 aaPredicted RBP9.8□□□□□ -0.84
CHFR-219ENST00000541341 NEUROD4Q9HD90 331 aa9.8□□□□□ -0.84
CHFR-219ENST00000541341 BPIFA1Q9NP55 256 aa9.8□□□□□ -0.84
CHFR-219ENST00000541341 MYNNQ9NPC7 610 aa9.8□□□□□ -0.84
CHFR-219ENST00000541341 KRCC1Q9NPI7 259 aaPredicted RBP9.8□□□□□ -0.84
CHFR-219ENST00000541341 SLC6A13Q9NSD5 602 aa9.8□□□□□ -0.84
CHFR-219ENST00000541341 TXNL4BQ9NX01 149 aaKnown RBP9.8□□□□□ -0.84
CHFR-219ENST00000541341 NUFIP1Q9UHK0 495 aaKnown RBP9.8□□□□□ -0.84
CHFR-219ENST00000541341 PPIL1Q9Y3C6 166 aa9.8□□□□□ -0.84
CHFR-219ENST00000541341 CFAP20Q9Y6A4 193 aaKnown RBP9.8□□□□□ -0.84
CHFR-219ENST00000541341 GNG14A0A1W2PPG7 69 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 A8MU76 341 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 INMT-MINDY4F8WBC2 141 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 MID1O15344 667 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 LZTS3O60299 673 aaPredicted RBP9.79□□□□□ -0.84
CHFR-219ENST00000541341 CPNE3O75131 537 aaKnown RBP9.79□□□□□ -0.84
CHFR-219ENST00000541341 CSO75390 466 aaKnown RBP9.79□□□□□ -0.84
CHFR-219ENST00000541341 DIRAS1O95057 198 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 IGLV3-19P01714 112 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 WNT1P04628 370 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 IGHV4-34P06331 123 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 H1F0P07305 194 aaKnown RBP9.79□□□□□ -0.84
CHFR-219ENST00000541341 CCNYL3P0C7X3 344 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 ZNF883P0CG24 379 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 PRSS56P0CW18 603 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 HK1P19367 917 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 IDSP22304 550 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 STOMP27105 288 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 ITPKBP27987 946 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 EPHA2P29317 976 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 PPP2R1BP30154 601 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 GDF5P43026 501 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 RGRP47804 291 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 EPHA4P54764 986 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 PCBP3P57721 371 aaKnown RBP9.79□□□□□ -0.84
CHFR-219ENST00000541341 DSTNP60981 165 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 CYP4F2P78329 520 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 SEMG2Q02383 582 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 HSF2Q03933 536 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 DSG2Q14126 1118 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 ZNF79Q15937 498 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 ZBTB37Q5TC79 503 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 NXNL2Q5VZ03 156 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 CD276Q5ZPR3 534 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 CD200R1LQ6Q8B3 271 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 KLHL17Q6TDP4 642 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 Q6ZVU0 165 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 SPATC1Q76KD6 591 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 TPRA1Q86W33 373 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 LRRC56Q8IYG6 542 aaPredicted RBP9.79□□□□□ -0.84
CHFR-219ENST00000541341 GALNT11Q8NCW6 608 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 C15orf40Q8WUR7 153 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 MTFMTQ96DP5 389 aaKnown RBP9.79□□□□□ -0.84
CHFR-219ENST00000541341 C11orf24Q96F05 449 aaPredicted RBP9.79□□□□□ -0.84
CHFR-219ENST00000541341 OR2M2Q96R28 347 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 DCLRE1CQ96SD1 692 aaKnown RBP9.79□□□□□ -0.84
CHFR-219ENST00000541341 CDC6Q99741 560 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 SLC35A5Q9BS91 424 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 TMEM43Q9BTV4 400 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 PITHD1Q9GZP4 211 aaPredicted RBP9.79□□□□□ -0.84
CHFR-219ENST00000541341 C11orf54Q9H0W9 315 aaPredicted RBP9.79□□□□□ -0.84
CHFR-219ENST00000541341 MED28Q9H204 178 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 ANKRD19PQ9H560 264 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 ABCB9Q9NP78 766 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 A4GALTQ9NPC4 353 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 IL26Q9NPH9 171 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 TIGARQ9NQ88 270 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 C1GALT1Q9NS00 363 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 SLC9A8Q9Y2E8 581 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 AUP1Q9Y679 476 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 FKBP7Q9Y680 259 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 ACACAQ13085 2346 aa9.79□□□□□ -0.84
CHFR-219ENST00000541341 TRBC2A0A5B9 178 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 ANKRD61A6NGH8 418 aa9.78□□□□□ -0.84
CHFR-219ENST00000541341 GABRR3A8MPY1 467 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms