RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 CA7P43166 264 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 KIR3DL1P43629 444 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 RFX3P48380 749 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 CCT3P49368 545 aaKnown RBP8.45□□□□□ -1.06
SNHG1-215ENST00000540904 HBA1P69905 142 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 EFR3AQ14156 821 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 SLC10A1Q14973 349 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 TOMM20Q15388 145 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 C3AR1Q16581 482 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 DECR1Q16698 335 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 HYAL4Q2M3T9 481 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 VPS26BQ4G0F5 336 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 CYP27C1Q4G0S4 372 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 SLC9B1Q4ZJI4 515 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 OR4F3Q6IEY1 312 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 MFSD12Q6NUT3 480 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 ARHGAP11AQ6P4F7 1023 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 PAOXQ6QHF9 649 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 C3P1Q6ZMU1 363 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 MAVSQ7Z434 540 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 CAMKMTQ7Z624 323 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 CHERPQ8IWX8 916 aaKnown RBP8.45□□□□□ -1.06
SNHG1-215ENST00000540904 CLECL1Q8IZS7 167 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 CDRT4Q8N9R6 151 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 GPR151Q8TDV0 419 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 PIK3R3Q92569 461 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 FAM120BQ96EK7 910 aaKnown RBP8.45□□□□□ -1.06
SNHG1-215ENST00000540904 OTUB1Q96FW1 271 aaPredicted RBP8.45□□□□□ -1.06
SNHG1-215ENST00000540904 CHMP6Q96FZ7 201 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 RMND5BQ96G75 393 aaPredicted RBP8.45□□□□□ -1.06
SNHG1-215ENST00000540904 SLC35A4Q96G79 324 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 C16orf58Q96GQ5 468 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 MARK4Q96L34 752 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 TEX37Q96LM6 180 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 C7orf26Q96N11 449 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 GNRHR2Q96P88 292 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 LMF2Q9BU23 707 aaKnown RBP8.45□□□□□ -1.06
SNHG1-215ENST00000540904 OSBPL11Q9BXB4 747 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 LDAHQ9H6V9 325 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 EXO5Q9H790 373 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 CXorf36Q9H7Y0 433 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 NEUROD4Q9HD90 331 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 AIG1Q9NVV5 245 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 NTMQ9P121 344 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 B4GALT7Q9UBV7 327 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 MRTO4Q9UKD2 239 aaKnown RBP8.45□□□□□ -1.06
SNHG1-215ENST00000540904 ZNF835Q9Y2P0 537 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 LIPGQ9Y5X9 500 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 USH1CQ9Y6N9 552 aa8.45□□□□□ -1.06
SNHG1-215ENST00000540904 PRRC2CQ9Y520 2896 aaKnown RBP8.45□□□□□ -1.06
SNHG1-215ENST00000540904 ESPL1Q14674 2120 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 UQCRHLA0A096LP55 91 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 TRGV5A0A0B4J1U4 118 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 TTC36A6NLP5 189 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 C9JVG2 144 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 E9PBE3 544 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 NPIPA2E9PIF3 369 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 NPIPA3F8WFD2 350 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 RNASET2O00584 256 aaKnown RBP8.44□□□□□ -1.06
SNHG1-215ENST00000540904 ZNF195O14628 629 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 PRRG2O14669 202 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 GNB5O14775 395 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 TRAPPC6AO75865 159 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 KCNH1O95259 989 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 LDLRP01130 860 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 HMGN2P05204 90 aaKnown RBP8.44□□□□□ -1.06
SNHG1-215ENST00000540904 TPOP07202 933 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 CYP4B1P13584 511 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 S100A3P33764 101 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 SOAT1P35610 550 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 PTGDSP41222 190 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 TRPC1P48995 793 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 PRIM2P49643 509 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 CLNS1AP54105 237 aaKnown RBP8.44□□□□□ -1.06
SNHG1-215ENST00000540904 PNLIPRP2P54317 469 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 PER3P56645 1201 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 WNT3P56703 355 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 UFM1P61960 85 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 MRPS22P82650 360 aaKnown RBP8.44□□□□□ -1.06
SNHG1-215ENST00000540904 SNTA1Q13424 505 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 TP53BP2Q13625 1128 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 LASP1Q14847 261 aaKnown RBP8.44□□□□□ -1.06
SNHG1-215ENST00000540904 DUSP5Q16690 384 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 FAM174BQ3ZCQ3 159 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 SPANXN4Q5MJ08 99 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 FNDC7Q5VTL7 733 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 SLC30A6Q6NXT4 461 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 ANGPTL8Q6UXH0 198 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 Q6ZPB1 254 aaPredicted RBP8.44□□□□□ -1.06
SNHG1-215ENST00000540904 TRILQ7L0X0 811 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 GALNT10Q86SR1 603 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 CD163Q86VB7 1156 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 ANKRD46Q86W74 232 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 SLC16A11Q8NCK7 471 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 VPS37AQ8NEZ2 397 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 OR8J2Q8NGG1 315 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 OR4A15Q8NGL6 344 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 OR1J4Q8NGS1 313 aa8.44□□□□□ -1.06
SNHG1-215ENST00000540904 OR5AK3PQ8NH89 298 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms