RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 KIAA1549Q9HCM3 1950 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 SCN3AQ9NY46 2000 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 IGHV4-30-2A0A087WSY4 118 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 A0A0G2JN53 185 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 IQANK1A0A1B0GTG1 560 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 FAM234BA2RU67 622 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 LRIT2A6NDA9 550 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 PABPN1LA6NDY0 278 aaKnown RBP4.13□□□□□ -1.75
SNHG1-214ENST00000540865 GOLGA8KD6RF30 607 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 GOLGA8TH3BQL2 631 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 PLOD2O00469 737 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 EMC8O43402 210 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 TCF21O43680 179 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 LDB3O75112 727 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 TGM6O95932 706 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 PTMAP06454 111 aaKnown RBP4.13□□□□□ -1.75
SNHG1-214ENST00000540865 FESP07332 822 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 APRTP07741 180 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 SOD3P08294 240 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 RHOXF2BP0C7M4 288 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 SLC25A16P16260 332 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 HNF1AP20823 631 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 HNRNPH1P31943 449 aaKnown RBP4.13□□□□□ -1.75
SNHG1-214ENST00000540865 CASP3P42574 277 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 MAGEA1P43355 309 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 TMED10P49755 219 aaKnown RBP4.13□□□□□ -1.75
SNHG1-214ENST00000540865 RGS4P49798 205 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 LHX2P50458 406 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 PLA2G16P53816 162 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 AP1S2P56377 157 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 CRADDP78560 199 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 IGLV3-21P80748 117 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-214ENST00000540865 SRYQ05066 204 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 GPS1Q13098 491 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 KLF1Q13351 362 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-214ENST00000540865 EBPQ15125 230 aaKnown RBP4.13□□□□□ -1.75
SNHG1-214ENST00000540865 BCL2A1Q16548 175 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 NRF1Q16656 503 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 ADPRMQ3LIE5 342 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 FAM174BQ3ZCQ3 159 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 CT83Q5H943 113 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 FAM120AOSQ5T036 256 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 ARMC3Q5W041 872 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 TMEM200BQ69YZ2 307 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 UGT3A1Q6NUS8 523 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 AADACL2Q6P093 401 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 ZNF549Q6P9A3 640 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 TRIM40Q6P9F5 258 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 AAGABQ6PD74 315 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 CLEC2AQ6UVW9 174 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 SBSNQ6UWP8 590 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 CES3Q6UWW8 571 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 FRMD7Q6ZUT3 714 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 SLC29A4Q7RTT9 530 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 MYO1HQ8N1T3 1032 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 KLHL36Q8N4N3 616 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 ARIH2OSQ8N7S6 290 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 OR2L5Q8NG80 312 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 OR5AN1Q8NGI8 311 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 OR1J4Q8NGS1 313 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 SMAP2Q8WU79 429 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-214ENST00000540865 ANKRD7Q92527 254 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 FBXL8Q96CD0 374 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 C11orf24Q96F05 449 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-214ENST00000540865 FBXL20Q96IG2 436 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 ZNF845Q96IR2 970 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-214ENST00000540865 DGAT2Q96PD7 388 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 GAL3ST4Q96RP7 486 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 CHP1Q99653 195 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 KLHL4Q9C0H6 718 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 OR2B2Q9GZK3 357 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 ROGDIQ9GZN7 287 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 WWTR1Q9GZV5 400 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 OR10A4Q9H209 315 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 FANCFQ9NPI8 374 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 EIF2B3Q9NR50 452 aaKnown RBP4.13□□□□□ -1.75
SNHG1-214ENST00000540865 SNX15Q9NRS6 342 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 TEX10Q9NXF1 929 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-214ENST00000540865 ARL15Q9NXU5 204 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 MCM8Q9UJA3 840 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 ADAM29Q9UKF5 820 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 KCNS2Q9ULS6 477 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 LIPT1Q9Y234 373 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 MAGED1Q9Y5V3 778 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-214ENST00000540865 KCNE2Q9Y6J6 123 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 BIRC6Q9NR09 4857 aa4.13□□□□□ -1.75
SNHG1-214ENST00000540865 CTAGE9A4FU28 777 aa4.12□□□□□ -1.75
SNHG1-214ENST00000540865 C9orf118A6NHY6 69 aa4.12□□□□□ -1.75
SNHG1-214ENST00000540865 SLC22A20A6NK97 555 aa4.12□□□□□ -1.75
SNHG1-214ENST00000540865 CDC7O00311 574 aa4.12□□□□□ -1.75
SNHG1-214ENST00000540865 SSX4O60224 188 aa4.12□□□□□ -1.75
SNHG1-214ENST00000540865 NDUFS7O75251 213 aa4.12□□□□□ -1.75
SNHG1-214ENST00000540865 H2AFYO75367 372 aaKnown RBP4.12□□□□□ -1.75
SNHG1-214ENST00000540865 ULK1O75385 1050 aa4.12□□□□□ -1.75
SNHG1-214ENST00000540865 CBR3O75828 277 aa4.12□□□□□ -1.75
SNHG1-214ENST00000540865 FTCDO95954 541 aa4.12□□□□□ -1.75
SNHG1-214ENST00000540865 IFNB1P01574 187 aa4.12□□□□□ -1.75
SNHG1-214ENST00000540865 LPLP06858 475 aa4.12□□□□□ -1.75
SNHG1-214ENST00000540865 IGHV4-31P0DP07 118 aa4.12□□□□□ -1.75
SNHG1-214ENST00000540865 CPEP16870 476 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms