RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 TMEM45AQ9NWC5 275 aa6.42□□□□□ -1.38
LPCAT3-209ENST00000540060 CCDC167Q9P0B6 97 aa6.42□□□□□ -1.38
LPCAT3-209ENST00000540060 KLF13Q9Y2Y9 288 aaPredicted RBP6.42□□□□□ -1.38
LPCAT3-209ENST00000540060 UBR5O95071 2799 aaPredicted RBP6.42□□□□□ -1.38
LPCAT3-209ENST00000540060 RELNP78509 3460 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 ZNF462Q96JM2 2506 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 OR6C70A6NIJ9 312 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 TTLL8A6PVC2 850 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 CAPN14A8MX76 684 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 NR5A2O00482 541 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 TSPAN2O60636 221 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 UGT2B11O75310 529 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 RASAL1O95294 804 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 CPSF4O95639 269 aaKnown RBP6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 C1QCP02747 245 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 CD1EP15812 388 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 HOXB9P17482 250 aaPredicted RBP6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 DRD4P21917 467 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 UQCRC2P22695 453 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 PTPN6P29350 595 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 PIGAP37287 484 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 MAN2A2P49641 1150 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 PRIM2P49643 509 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 PRKAG1P54619 331 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 MLLT10P55197 1068 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 KCNK10P57789 538 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 GPR85P60893 370 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 PMP22Q01453 160 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 TLE1Q04724 770 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 C19orf57Q0VDD7 668 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 SF3A3Q12874 501 aaKnown RBP eCLIP6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 LASP1Q14847 261 aaKnown RBP6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 INPP5JQ15735 1006 aaPredicted RBP6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 DUSP5Q16690 384 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 SPDYE7PQ495Y7 208 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 CYP27C1Q4G0S4 372 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 SAXO2Q658L1 398 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 DESI1Q6ICB0 168 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 CDC73Q6P1J9 531 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 TMEM81Q6P7N7 255 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 ZCCHC12Q6PEW1 402 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 BHLHB9Q6PI77 547 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 FAM180AQ6UWF9 173 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 DNAJC14Q6Y2X3 702 aaPredicted RBP6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 GK5Q6ZS86 529 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 PRICKLE2Q7Z3G6 844 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 SPATA21Q7Z572 469 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 SULF2Q8IWU5 870 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 CLEC4FQ8N1N0 589 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 CPSF7Q8N684 471 aaKnown RBP6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 BCORP1Q8N888 145 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 SLC16A11Q8NCK7 471 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 OR5M3Q8NGP4 307 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 CPT1CQ8TCG5 803 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 SPPL2AQ8TCT8 520 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 RNF138Q8WVD3 245 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 PIK3R3Q92569 461 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 SLC9A6Q92581 669 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 JADE3Q92613 823 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 HGDQ93099 445 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 EFHD2Q96C19 240 aaPredicted RBP6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 NTNG2Q96CW9 530 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 SNRNP40Q96DI7 357 aaKnown RBP6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 SPDL1Q96EA4 605 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 NEURL3Q96EH8 262 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 OTUB1Q96FW1 271 aaPredicted RBP6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 C16orf58Q96GQ5 468 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 SLC35G5Q96KT7 338 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 SECISBP2Q96T21 854 aaKnown RBP6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 STACQ99469 402 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 BARD1Q99728 777 aaKnown RBP6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 SLC35A5Q9BS91 424 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 INPP5KQ9BT40 448 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 ACTRT3Q9BYD9 372 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 NSRP1Q9H0G5 558 aaKnown RBP6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 RABEP2Q9H5N1 569 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 RMND5AQ9H871 391 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 Q9N2J8 555 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 DUSP22Q9NRW4 184 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 SLC6A13Q9NSD5 602 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 SACM1LQ9NTJ5 587 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 GIN1Q9NXP7 522 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 CNOT11Q9UKZ1 510 aaKnown RBP6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 CBLCQ9ULV8 474 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 VPS4AQ9UN37 437 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 PCDHGB4Q9UN71 923 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 OR10H1Q9Y4A9 318 aa6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 FASNP49327 2511 aaKnown RBP6.41□□□□□ -1.38
LPCAT3-209ENST00000540060 TENM4Q6N022 2769 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 GXYLT2A0PJZ3 443 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 PINLYPA6NC86 204 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 GMNCA6NCL1 334 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 ANKRD33BA6NCL7 494 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 CCDC154A6NI56 674 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 C3orf80F5H4A9 247 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 G3V3Y1 287 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 KLRC4-KLRK1H3BQV0 150 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 RFXANKO14593 260 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 TP53I11O14683 189 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 SLC28A2O43868 658 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms