RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 STACQ99469 402 aa14.27□□□□□ -0.12
DDB1-216ENST00000539739 CNTNAP3Q9BZ76 1288 aa14.27□□□□□ -0.12
DDB1-216ENST00000539739 NXF5Q9H1B4 397 aaKnown RBP14.27□□□□□ -0.12
DDB1-216ENST00000539739 DUSP22Q9NRW4 184 aa14.27□□□□□ -0.12
DDB1-216ENST00000539739 NDE1Q9NXR1 346 aa14.27□□□□□ -0.12
DDB1-216ENST00000539739 MED13Q9UHV7 2174 aa14.27□□□□□ -0.13
DDB1-216ENST00000539739 TMEM200CA6NKL6 621 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 ITGA10O75578 1167 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 NKX2-2O95096 273 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 ITGB2P05107 769 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 ALPPP05187 535 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 CT45A8P0DMV1 189 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 CT45A9P0DMV2 189 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 ACP2P11117 423 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 GABRA3P34903 492 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 CASP9P55211 416 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 POLE2P56282 527 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 RPS26P62854 115 aaKnown RBP14.26□□□□□ -0.13
DDB1-216ENST00000539739 RAPSNQ13702 412 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 INAQ16352 499 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 TBR1Q16650 682 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 CT45A2Q5DJT8 189 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 PIGGQ5H8A4 983 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 ACER2Q5QJU3 275 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.26□□□□□ -0.13
DDB1-216ENST00000539739 B3GNTL1Q67FW5 361 aaPredicted RBP14.26□□□□□ -0.13
DDB1-216ENST00000539739 NANOGP8Q6NSW7 305 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 TNFAIP8L2Q6P589 184 aaPredicted RBP14.26□□□□□ -0.13
DDB1-216ENST00000539739 ARMC10Q8N2F6 343 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 SLC15A4Q8N697 577 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 COX18Q8N8Q8 333 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 OR8J3Q8NGG0 315 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 FBXO30Q8TB52 745 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 RAB3IPQ96QF0 476 aaPredicted RBP14.26□□□□□ -0.13
DDB1-216ENST00000539739 OR7D2Q96RA2 312 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 CPPED1Q9BRF8 314 aaPredicted RBP14.26□□□□□ -0.13
DDB1-216ENST00000539739 OR51I1Q9H343 314 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 PIGUQ9H490 435 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 NANOGQ9H9S0 305 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 EXD2Q9NVH0 621 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 THUMPD1Q9NXG2 353 aaKnown RBP14.26□□□□□ -0.13
DDB1-216ENST00000539739 STMN3Q9NZ72 180 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 B2RBV5 119 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 FXYD1O00168 92 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 ASNA1O43681 348 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 CEACAM4O75871 244 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 OR2J2O76002 312 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 TPPPO94811 219 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 MAP3K8P41279 467 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 SSR4P51571 173 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 RGNQ15493 299 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 ADRM1Q16186 407 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 NNATQ16517 81 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 DUSP5Q16690 384 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 CYP27C1Q4G0S4 372 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 ATAD3BQ5T9A4 648 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 C16orf89Q6UX73 402 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 ISLR2Q6UXK2 745 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 NPSR1Q6W5P4 371 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 GPR155Q7Z3F1 870 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 FDCSPQ8NFU4 85 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 OR5D16Q8NGK9 328 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 XAGE5Q8WWM1 108 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 SLC39A3Q9BRY0 314 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 ZNF552Q9H707 407 aaPredicted RBP14.26□□□□□ -0.13
DDB1-216ENST00000539739 MRTO4Q9UKD2 239 aaKnown RBP14.26□□□□□ -0.13
DDB1-216ENST00000539739 CBLCQ9ULV8 474 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 AP3M1Q9Y2T2 418 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 LAMA5O15230 3695 aa14.26□□□□□ -0.13
DDB1-216ENST00000539739 TMEM247A6NEH6 219 aa14.25□□□□□ -0.13
DDB1-216ENST00000539739 MKRN2OSH3BPM6 223 aa14.25□□□□□ -0.13
DDB1-216ENST00000539739 CDK2AP1O14519 115 aa14.25□□□□□ -0.13
DDB1-216ENST00000539739 TO15178 435 aa14.25□□□□□ -0.13
DDB1-216ENST00000539739 ATP5HO75947 161 aa14.25□□□□□ -0.13
DDB1-216ENST00000539739 OR12D1P0DN82 309 aa14.25□□□□□ -0.13
DDB1-216ENST00000539739 T-ENOLP0DO92 83 aa14.25□□□□□ -0.13
DDB1-216ENST00000539739 GPX2P18283 190 aa14.25□□□□□ -0.13
DDB1-216ENST00000539739 TRHRP34981 398 aaPredicted RBP14.25□□□□□ -0.13
DDB1-216ENST00000539739 SOX11P35716 441 aa14.25□□□□□ -0.13
DDB1-216ENST00000539739 KRT20P35900 424 aa14.25□□□□□ -0.13
DDB1-216ENST00000539739 MAN2A2P49641 1150 aa14.25□□□□□ -0.13
DDB1-216ENST00000539739 TMED10P49755 219 aaKnown RBP14.25□□□□□ -0.13
DDB1-216ENST00000539739 PSMD4P55036 377 aaKnown RBP14.25□□□□□ -0.13
DDB1-216ENST00000539739 MTPNP58546 118 aa14.25□□□□□ -0.13
DDB1-216ENST00000539739 POU6F2P78424 691 aaPredicted RBP14.25□□□□□ -0.13
DDB1-216ENST00000539739 LSAMPQ13449 338 aa14.25□□□□□ -0.13
DDB1-216ENST00000539739 DECR1Q16698 335 aa14.25□□□□□ -0.13
DDB1-216ENST00000539739 COX20Q5RI15 118 aa14.25□□□□□ -0.13
DDB1-216ENST00000539739 EXOSC6Q5RKV6 272 aaKnown RBP14.25□□□□□ -0.13
DDB1-216ENST00000539739 TMEM154Q6P9G4 183 aa14.25□□□□□ -0.13
DDB1-216ENST00000539739 OPN5Q6U736 354 aa14.25□□□□□ -0.13
DDB1-216ENST00000539739 C16orf47Q6ZP98 133 aaPredicted RBP14.25□□□□□ -0.13
DDB1-216ENST00000539739 SLC34A3Q8N130 599 aa14.25□□□□□ -0.13
DDB1-216ENST00000539739 TMEM156Q8N614 296 aa14.25□□□□□ -0.13
DDB1-216ENST00000539739 HORMAD2Q8N7B1 307 aa14.25□□□□□ -0.13
DDB1-216ENST00000539739 ASB15Q8WXK1 588 aa14.25□□□□□ -0.13
DDB1-216ENST00000539739 EXTL1Q92935 676 aa14.25□□□□□ -0.13
DDB1-216ENST00000539739 OTUB1Q96FW1 271 aaPredicted RBP14.25□□□□□ -0.13
DDB1-216ENST00000539739 SLC35A4Q96G79 324 aa14.25□□□□□ -0.13
DDB1-216ENST00000539739 LMF1Q96S06 567 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms