RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 OR6C76A6NM76 312 aa13.65□□□□□ -0.22
USB1-203ENST00000539737 CAPN14A8MX76 684 aa13.65□□□□□ -0.22
USB1-203ENST00000539737 ITM2AO43736 263 aa13.65□□□□□ -0.22
USB1-203ENST00000539737 SUSD5O60279 629 aa13.65□□□□□ -0.22
USB1-203ENST00000539737 ERAL1O75616 437 aaKnown RBP13.65□□□□□ -0.22
USB1-203ENST00000539737 LY6G6DO95868 133 aa13.65□□□□□ -0.22
USB1-203ENST00000539737 INHBBP09529 407 aa13.65□□□□□ -0.22
USB1-203ENST00000539737 PORP16435 677 aaPredicted RBP13.65□□□□□ -0.22
USB1-203ENST00000539737 CSNK2A2P19784 350 aaPredicted RBP13.65□□□□□ -0.22
USB1-203ENST00000539737 DDCP20711 480 aa13.65□□□□□ -0.22
USB1-203ENST00000539737 HOXC12P31275 282 aa13.65□□□□□ -0.22
USB1-203ENST00000539737 ASCL1P50553 236 aa13.65□□□□□ -0.22
USB1-203ENST00000539737 RPL14P50914 215 aaKnown RBP13.65□□□□□ -0.22
USB1-203ENST00000539737 XKP51811 444 aa13.65□□□□□ -0.22
USB1-203ENST00000539737 KIAA0040Q15053 153 aa13.65□□□□□ -0.22
USB1-203ENST00000539737 HYAL4Q2M3T9 481 aa13.65□□□□□ -0.22
USB1-203ENST00000539737 ATP6AP1LQ52LC2 224 aa13.65□□□□□ -0.22
USB1-203ENST00000539737 SLC22A10Q63ZE4 541 aa13.65□□□□□ -0.22
USB1-203ENST00000539737 Q6ZSR9 355 aa13.65□□□□□ -0.22
USB1-203ENST00000539737 GALNT12Q8IXK2 581 aa13.65□□□□□ -0.22
USB1-203ENST00000539737 TAGAPQ8N103 731 aa13.65□□□□□ -0.22
USB1-203ENST00000539737 ZNF781Q8N8C0 355 aa13.65□□□□□ -0.22
USB1-203ENST00000539737 ARSGQ96EG1 525 aa13.65□□□□□ -0.22
USB1-203ENST00000539737 C18orf12Q96KH6 178 aa13.65□□□□□ -0.22
USB1-203ENST00000539737 FCRL1Q96LA6 429 aa13.65□□□□□ -0.22
USB1-203ENST00000539737 DOCK7Q96N67 2140 aa13.65□□□□□ -0.22
USB1-203ENST00000539737 SORT1Q99523 831 aa13.65□□□□□ -0.22
USB1-203ENST00000539737 MIEF1Q9NQG6 463 aa13.65□□□□□ -0.22
USB1-203ENST00000539737 BOKQ9UMX3 212 aaPredicted RBP13.65□□□□□ -0.22
USB1-203ENST00000539737 ARID1AO14497 2285 aa13.64□□□□□ -0.23
USB1-203ENST00000539737 UQCRHLA0A096LP55 91 aa13.64□□□□□ -0.23
USB1-203ENST00000539737 EEF1E1-BLOC1S5C9J1V9 151 aa13.64□□□□□ -0.23
USB1-203ENST00000539737 SMAD7O15105 426 aaKnown RBP13.64□□□□□ -0.23
USB1-203ENST00000539737 EEF1E1O43324 174 aaKnown RBP13.64□□□□□ -0.23
USB1-203ENST00000539737 ATP1B1P05026 303 aa13.64□□□□□ -0.23
USB1-203ENST00000539737 FOSL1P15407 271 aa13.64□□□□□ -0.23
USB1-203ENST00000539737 GDF1P27539 372 aa13.64□□□□□ -0.23
USB1-203ENST00000539737 ERVK-8P63133 956 aa13.64□□□□□ -0.23
USB1-203ENST00000539737 DUSP8Q13202 625 aa13.64□□□□□ -0.23
USB1-203ENST00000539737 PDCD2Q16342 344 aaPredicted RBP13.64□□□□□ -0.23
USB1-203ENST00000539737 GALNTL6Q49A17 601 aa13.64□□□□□ -0.23
USB1-203ENST00000539737 DESI1Q6ICB0 168 aa13.64□□□□□ -0.23
USB1-203ENST00000539737 FAM71E1Q6IPT2 247 aa13.64□□□□□ -0.23
USB1-203ENST00000539737 BIVMQ86UB2 503 aa13.64□□□□□ -0.23
USB1-203ENST00000539737 LRRC25Q8N386 305 aaPredicted RBP13.64□□□□□ -0.23
USB1-203ENST00000539737 NEIL3Q8TAT5 605 aa13.64□□□□□ -0.23
USB1-203ENST00000539737 FAM222BQ8WU58 562 aa13.64□□□□□ -0.23
USB1-203ENST00000539737 MBD6Q96DN6 1003 aa13.64□□□□□ -0.23
USB1-203ENST00000539737 ZFP64Q9NPA5 681 aa13.64□□□□□ -0.23
USB1-203ENST00000539737 THAP1Q9NVV9 213 aa13.64□□□□□ -0.23
USB1-203ENST00000539737 HEY2Q9UBP5 337 aa13.64□□□□□ -0.23
USB1-203ENST00000539737 B4GALT7Q9UBV7 327 aa13.64□□□□□ -0.23
USB1-203ENST00000539737 CNOT11Q9UKZ1 510 aaKnown RBP13.64□□□□□ -0.23
USB1-203ENST00000539737 ERVK-19Q9WJR5 959 aa13.64□□□□□ -0.23
USB1-203ENST00000539737 COL6A5A8TX70 2615 aa13.64□□□□□ -0.23
USB1-203ENST00000539737 TUBAL3A6NHL2 446 aa13.63□□□□□ -0.23
USB1-203ENST00000539737 DVL2O14641 736 aa13.63□□□□□ -0.23
USB1-203ENST00000539737 KLF11O14901 512 aa13.63□□□□□ -0.23
USB1-203ENST00000539737 HCN1O60741 890 aa13.63□□□□□ -0.23
USB1-203ENST00000539737 SNNO75324 88 aaPredicted RBP13.63□□□□□ -0.23
USB1-203ENST00000539737 TRAPPC6AO75865 159 aa13.63□□□□□ -0.23
USB1-203ENST00000539737 SASH3O75995 380 aa13.63□□□□□ -0.23
USB1-203ENST00000539737 IGKV3-11P04433 115 aa13.63□□□□□ -0.23
USB1-203ENST00000539737 DDX5P17844 614 aaKnown RBP13.63□□□□□ -0.23
USB1-203ENST00000539737 SDC1P18827 310 aa13.63□□□□□ -0.23
USB1-203ENST00000539737 CD53P19397 219 aa13.63□□□□□ -0.23
USB1-203ENST00000539737 NT5EP21589 574 aa13.63□□□□□ -0.23
USB1-203ENST00000539737 ASMTP46597 345 aa13.63□□□□□ -0.23
USB1-203ENST00000539737 TMED10P49755 219 aaKnown RBP13.63□□□□□ -0.23
USB1-203ENST00000539737 NRG3P56975 720 aa13.63□□□□□ -0.23
USB1-203ENST00000539737 DCAF7P61962 342 aa13.63□□□□□ -0.23
USB1-203ENST00000539737 RPP38P78345 283 aaKnown RBP13.63□□□□□ -0.23
USB1-203ENST00000539737 CRYZQ08257 329 aaKnown RBP13.63□□□□□ -0.23
USB1-203ENST00000539737 C2orf80Q0P641 193 aa13.63□□□□□ -0.23
USB1-203ENST00000539737 FOXF2Q12947 444 aa13.63□□□□□ -0.23
USB1-203ENST00000539737 MAD2L1Q13257 205 aaPredicted RBP13.63□□□□□ -0.23
USB1-203ENST00000539737 EIPR1Q53HC9 387 aa13.63□□□□□ -0.23
USB1-203ENST00000539737 LIX1Q8N485 282 aa13.63□□□□□ -0.23
USB1-203ENST00000539737 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.63□□□□□ -0.237e-6■■■■□ 22
USB1-203ENST00000539737 PAQR8Q8TEZ7 354 aa13.63□□□□□ -0.23
USB1-203ENST00000539737 EXOSC8Q96B26 276 aaKnown RBP13.63□□□□□ -0.23
USB1-203ENST00000539737 TUBGCP3Q96CW5 907 aa13.63□□□□□ -0.23
USB1-203ENST00000539737 SPACA9Q96E40 222 aaPredicted RBP13.63□□□□□ -0.23
USB1-203ENST00000539737 CNRIP1Q96F85 164 aaPredicted RBP13.63□□□□□ -0.23
USB1-203ENST00000539737 ZNF764Q96H86 408 aaPredicted RBP13.63□□□□□ -0.23
USB1-203ENST00000539737 TRIB1Q96RU8 372 aa13.63□□□□□ -0.23
USB1-203ENST00000539737 C20orf27Q9GZN8 174 aa13.63□□□□□ -0.23
USB1-203ENST00000539737 MANSC1Q9H8J5 431 aa13.63□□□□□ -0.23
USB1-203ENST00000539737 ZNF395Q9H8N7 513 aaPredicted RBP13.63□□□□□ -0.23
USB1-203ENST00000539737 CXorf21Q9HAI6 301 aa13.63□□□□□ -0.23
USB1-203ENST00000539737 SLC24A3Q9HC58 644 aa13.63□□□□□ -0.23
USB1-203ENST00000539737 CNIH4Q9P003 139 aa13.63□□□□□ -0.23
USB1-203ENST00000539737 CAMK2AQ9UQM7 478 aa13.63□□□□□ -0.23
USB1-203ENST00000539737 CHCHD2Q9Y6H1 151 aaPredicted RBP13.63□□□□□ -0.23
USB1-203ENST00000539737 FBN1P35555 2871 aaKnown RBP13.63□□□□□ -0.23
USB1-203ENST00000539737 C2orf92A0A1B0GVN3 265 aa13.62□□□□□ -0.23
USB1-203ENST00000539737 CLCA1A8K7I4 914 aa13.62□□□□□ -0.23
USB1-203ENST00000539737 HSPB2A8KAH6 182 aa13.62□□□□□ -0.23
USB1-203ENST00000539737 H7C1Q1 480 aa13.62□□□□□ -0.23
USB1-203ENST00000539737 TP53I11O14683 189 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms