RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 SEC14L4Q9UDX3 406 aa13.18□□□□□ -0.3
UBE3B-210ENST00000539599 ENTPD4Q9Y227 616 aa13.18□□□□□ -0.3
UBE3B-210ENST00000539599 SOCS6O14544 535 aa13.18□□□□□ -0.3
UBE3B-210ENST00000539599 CDC42EP2O14613 210 aa13.18□□□□□ -0.3
UBE3B-210ENST00000539599 DYRK3O43781 588 aa13.18□□□□□ -0.3
UBE3B-210ENST00000539599 GKN3PP0CG01 181 aa13.18□□□□□ -0.3
UBE3B-210ENST00000539599 LIMS3P0CW19 117 aa13.18□□□□□ -0.3
UBE3B-210ENST00000539599 LIMS4P0CW20 117 aa13.18□□□□□ -0.3
UBE3B-210ENST00000539599 PRG2P13727 222 aa13.18□□□□□ -0.3
UBE3B-210ENST00000539599 PPP2CBP62714 309 aa13.18□□□□□ -0.3
UBE3B-210ENST00000539599 PPP2CAP67775 309 aa13.18□□□□□ -0.3
UBE3B-210ENST00000539599 MLLT11Q13015 90 aaPredicted RBP13.18□□□□□ -0.3
UBE3B-210ENST00000539599 RUNX3Q13761 415 aa13.18□□□□□ -0.3
UBE3B-210ENST00000539599 ARMC4Q5T2S8 1044 aa13.18□□□□□ -0.3
UBE3B-210ENST00000539599 SMARCD3Q6STE5 483 aa13.18□□□□□ -0.3
UBE3B-210ENST00000539599 FAM26EQ8N5C1 309 aa13.18□□□□□ -0.3
UBE3B-210ENST00000539599 ZNF513Q8N8E2 541 aaPredicted RBP13.18□□□□□ -0.3
UBE3B-210ENST00000539599 ANKK1Q8NFD2 765 aa13.18□□□□□ -0.3
UBE3B-210ENST00000539599 OR7G2Q8NG99 324 aa13.18□□□□□ -0.3
UBE3B-210ENST00000539599 DIRAS2Q96HU8 199 aa13.18□□□□□ -0.3
UBE3B-210ENST00000539599 SRRQ9GZT4 340 aa13.18□□□□□ -0.3
UBE3B-210ENST00000539599 TBC1D29Q9UFV1 150 aa13.18□□□□□ -0.3
UBE3B-210ENST00000539599 CES1P1Q9UKY3 287 aa13.18□□□□□ -0.3
UBE3B-210ENST00000539599 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.18□□□□□ -0.3
UBE3B-210ENST00000539599 ARHGEF17Q96PE2 2063 aaPredicted RBP13.18□□□□□ -0.3
UBE3B-210ENST00000539599 CD8B2A6NJW9 211 aa13.17□□□□□ -0.3
UBE3B-210ENST00000539599 TBX19O60806 448 aa13.17□□□□□ -0.3
UBE3B-210ENST00000539599 ZNF888P0CJ79 500 aaPredicted RBP13.17□□□□□ -0.3
UBE3B-210ENST00000539599 CD8BP10966 210 aa13.17□□□□□ -0.3
UBE3B-210ENST00000539599 F3P13726 295 aa13.17□□□□□ -0.3
UBE3B-210ENST00000539599 RACK1P63244 317 aaKnown RBP13.17□□□□□ -0.3
UBE3B-210ENST00000539599 C1DQ13901 141 aaKnown RBP13.17□□□□□ -0.3
UBE3B-210ENST00000539599 AGERQ15109 404 aa13.17□□□□□ -0.3
UBE3B-210ENST00000539599 ZIC1Q15915 447 aa13.17□□□□□ -0.3
UBE3B-210ENST00000539599 OCLNQ16625 522 aa13.17□□□□□ -0.3
UBE3B-210ENST00000539599 FAM214AQ32MH5 1076 aa13.17□□□□□ -0.3
UBE3B-210ENST00000539599 ENTPD8Q5MY95 495 aa13.17□□□□□ -0.3
UBE3B-210ENST00000539599 SLC35F1Q5T1Q4 408 aa13.17□□□□□ -0.3
UBE3B-210ENST00000539599 MEDAGQ5VYS4 303 aa13.17□□□□□ -0.3
UBE3B-210ENST00000539599 HSDL2Q6YN16 418 aa13.17□□□□□ -0.3
UBE3B-210ENST00000539599 FAM92BQ6ZTR7 304 aa13.17□□□□□ -0.3
UBE3B-210ENST00000539599 PRSS41Q7RTY9 318 aa13.17□□□□□ -0.3
UBE3B-210ENST00000539599 TEX47Q8TBZ9 253 aa13.17□□□□□ -0.3
UBE3B-210ENST00000539599 ELP4Q96EB1 424 aa13.17□□□□□ -0.3
UBE3B-210ENST00000539599 SLC35A4Q96G79 324 aa13.17□□□□□ -0.3
UBE3B-210ENST00000539599 PRRG3Q9BZD7 231 aa13.17□□□□□ -0.3
UBE3B-210ENST00000539599 BTBD1Q9H0C5 482 aa13.17□□□□□ -0.3
UBE3B-210ENST00000539599 NEK6Q9HC98 313 aa13.17□□□□□ -0.3
UBE3B-210ENST00000539599 ZSCAN32Q9NX65 697 aa13.17□□□□□ -0.3
UBE3B-210ENST00000539599 DIMT1Q9UNQ2 313 aaKnown RBP13.17□□□□□ -0.3
UBE3B-210ENST00000539599 CMAHPQ9Y471 501 aa13.17□□□□□ -0.3
UBE3B-210ENST00000539599 A0A1B0GVC2 190 aa13.17□□□□□ -0.3
UBE3B-210ENST00000539599 A6NIN4 97 aa13.17□□□□□ -0.3
UBE3B-210ENST00000539599 UBXN7O94888 489 aa13.17□□□□□ -0.3
UBE3B-210ENST00000539599 APEX1P27695 318 aaKnown RBP13.17□□□□□ -0.3
UBE3B-210ENST00000539599 ETV6P41212 452 aa13.17□□□□□ -0.3
UBE3B-210ENST00000539599 RFX3P48380 749 aa13.17□□□□□ -0.3
UBE3B-210ENST00000539599 EFNB1P98172 346 aa13.17□□□□□ -0.3
UBE3B-210ENST00000539599 RPE65Q16518 533 aa13.17□□□□□ -0.3
UBE3B-210ENST00000539599 TJAP1Q5JTD0 557 aa13.17□□□□□ -0.3
UBE3B-210ENST00000539599 ATAD3CQ5T2N8 411 aa13.17□□□□□ -0.3
UBE3B-210ENST00000539599 SLC48A1Q6P1K1 146 aa13.17□□□□□ -0.3
UBE3B-210ENST00000539599 C16orf62Q7Z3J2 963 aa13.17□□□□□ -0.3
UBE3B-210ENST00000539599 TRIM48Q8IWZ4 208 aa13.17□□□□□ -0.3
UBE3B-210ENST00000539599 KATNB1Q9BVA0 655 aa13.17□□□□□ -0.3
UBE3B-210ENST00000539599 FAIM2Q9BWQ8 316 aa13.17□□□□□ -0.3
UBE3B-210ENST00000539599 TTTY10Q9BZA0 68 aa13.17□□□□□ -0.3
UBE3B-210ENST00000539599 DDX28Q9NUL7 540 aaKnown RBP13.17□□□□□ -0.3
UBE3B-210ENST00000539599 CRNNQ9UBG3 495 aaPredicted RBP13.17□□□□□ -0.3
UBE3B-210ENST00000539599 DOCK8Q8NF50 2099 aa13.16□□□□□ -0.3
UBE3B-210ENST00000539599 APOA1P02647 267 aa13.16□□□□□ -0.3
UBE3B-210ENST00000539599 MYL12AP19105 171 aa13.16□□□□□ -0.3
UBE3B-210ENST00000539599 HTR3AP46098 478 aa13.16□□□□□ -0.3
UBE3B-210ENST00000539599 MTNR1AP48039 350 aa13.16□□□□□ -0.3
UBE3B-210ENST00000539599 SMSP52788 366 aa13.16□□□□□ -0.3
UBE3B-210ENST00000539599 WNT4P56705 351 aa13.16□□□□□ -0.3
UBE3B-210ENST00000539599 DEFA1P59665 94 aa13.16□□□□□ -0.3
UBE3B-210ENST00000539599 DEFA3P59666 94 aa13.16□□□□□ -0.3
UBE3B-210ENST00000539599 RUNX1T1Q06455 604 aa13.16□□□□□ -0.3
UBE3B-210ENST00000539599 P2RY14Q15391 338 aa13.16□□□□□ -0.3
UBE3B-210ENST00000539599 DEFB134Q4QY38 66 aa13.16□□□□□ -0.3
UBE3B-210ENST00000539599 AGAP6Q5VW22 663 aa13.16□□□□□ -0.3
UBE3B-210ENST00000539599 SLC27A4Q6P1M0 643 aa13.16□□□□□ -0.3
UBE3B-210ENST00000539599 VN1R4Q7Z5H5 301 aa13.16□□□□□ -0.3
UBE3B-210ENST00000539599 LAPTM4BQ86VI4 370 aa13.16□□□□□ -0.3
UBE3B-210ENST00000539599 ATP6V1C2Q8NEY4 427 aa13.16□□□□□ -0.3
UBE3B-210ENST00000539599 BBS10Q8TAM1 723 aa13.16□□□□□ -0.3
UBE3B-210ENST00000539599 TMEM163Q8TC26 289 aa13.16□□□□□ -0.3
UBE3B-210ENST00000539599 TSACCQ96A04 125 aaPredicted RBP13.16□□□□□ -0.3
UBE3B-210ENST00000539599 SLC25A46Q96AG3 418 aa13.16□□□□□ -0.3
UBE3B-210ENST00000539599 AGAP4Q96P64 663 aa13.16□□□□□ -0.3
UBE3B-210ENST00000539599 TTYH2Q9BSA4 534 aa13.16□□□□□ -0.3
UBE3B-210ENST00000539599 C11orf54Q9H0W9 315 aaPredicted RBP13.16□□□□□ -0.3
UBE3B-210ENST00000539599 PLSCR3Q9NRY6 295 aa13.16□□□□□ -0.3
UBE3B-210ENST00000539599 GIMAP4Q9NUV9 329 aa13.16□□□□□ -0.3
UBE3B-210ENST00000539599 TAS2R7Q9NYW3 318 aa13.16□□□□□ -0.3
UBE3B-210ENST00000539599 WBP11Q9Y2W2 641 aaKnown RBP13.16□□□□□ -0.3
UBE3B-210ENST00000539599 A0A075B6Q4 140 aa13.16□□□□□ -0.3
UBE3B-210ENST00000539599 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.16□□□□□ -0.3
UBE3B-210ENST00000539599 P2RX6O15547 441 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms