RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 ATP1A4Q13733 1029 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 COL9A2Q14055 689 aaPredicted RBP9.5□□□□□ -0.89
CLPB-210ENST00000539148 LASP1Q14847 261 aaKnown RBP9.5□□□□□ -0.89
CLPB-210ENST00000539148 ADRM1Q16186 407 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 DECR1Q16698 335 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 CYP51A1Q16850 503 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 ZNF630Q2M218 657 aaPredicted RBP9.5□□□□□ -0.89
CLPB-210ENST00000539148 FAM98BQ52LJ0 330 aaKnown RBP9.5□□□□□ -0.89
CLPB-210ENST00000539148 RUNDC3AQ59EK9 446 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 FHL5Q5TD97 284 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 ABHD17BQ5VST6 288 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 MFSD12Q6NUT3 480 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 OPN5Q6U736 354 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 DLEU7Q6UYE1 221 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 C16orf62Q7Z3J2 963 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 SERPINA11Q86U17 422 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 KRT73Q86Y46 540 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 SPACA3Q8IXA5 215 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 EID3Q8N140 333 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 HORMAD2Q8N7B1 307 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 ZNF615Q8N8J6 731 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 COX18Q8N8Q8 333 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 HIPK4Q8NE63 616 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 NFAM1Q8NET5 270 aaPredicted RBP9.5□□□□□ -0.89
CLPB-210ENST00000539148 OR5AK3PQ8NH89 298 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 C16orf52Q8NHV5 167 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 GPR151Q8TDV0 419 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 ELP5Q8TE02 316 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 APOBEC4Q8WW27 367 aaKnown RBP9.5□□□□□ -0.89
CLPB-210ENST00000539148 OIT3Q8WWZ8 545 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 ZCCHC14Q8WYQ9 949 aaKnown RBP9.5□□□□□ -0.89
CLPB-210ENST00000539148 TM9SF4Q92544 642 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 SLC9A6Q92581 669 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 DTNBP1Q96EV8 351 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 CENPNQ96H22 339 aaPredicted RBP9.5□□□□□ -0.89
CLPB-210ENST00000539148 LCORQ96JN0 433 aaPredicted RBP9.5□□□□□ -0.89
CLPB-210ENST00000539148 NSMCE2Q96MF7 247 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 GAL3ST4Q96RP7 486 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 WDR77Q9BQA1 342 aaPredicted RBP9.5□□□□□ -0.89
CLPB-210ENST00000539148 LMF2Q9BU23 707 aaKnown RBP9.5□□□□□ -0.89
CLPB-210ENST00000539148 BDH2Q9BUT1 245 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 SPATA5L1Q9BVQ7 753 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 OSBPL11Q9BXB4 747 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 PIGUQ9H490 435 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 ARMC7Q9H6L4 198 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 FOLH1BQ9HBA9 442 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 EQTNQ9NQ60 294 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 POLE3Q9NRF9 147 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 SIRT3Q9NTG7 399 aaPredicted RBP9.5□□□□□ -0.89
CLPB-210ENST00000539148 NDUFA13Q9P0J0 144 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 P2RX2Q9UBL9 471 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 RIMS3Q9UJD0 308 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 ANAPC2Q9UJX6 822 aa9.5□□□□□ -0.89
CLPB-210ENST00000539148 YARS2Q9Y2Z4 477 aaKnown RBP9.5□□□□□ -0.89
CLPB-210ENST00000539148 ANKRD11Q6UB99 2663 aaPredicted RBP9.49□□□□□ -0.89
CLPB-210ENST00000539148 DOCK10Q96BY6 2186 aa9.49□□□□□ -0.89
CLPB-210ENST00000539148 A0A087WV48 116 aa9.49□□□□□ -0.89
CLPB-210ENST00000539148 IGHV3-20A0A0C4DH32 117 aa9.49□□□□□ -0.89
CLPB-210ENST00000539148 MYOCOSA0A1B0GUC4 107 aa9.49□□□□□ -0.89
CLPB-210ENST00000539148 ASPDHA6ND91 283 aa9.49□□□□□ -0.89
CLPB-210ENST00000539148 FRG2CA6NGY1 282 aa9.49□□□□□ -0.89
CLPB-210ENST00000539148 GSTA4O15217 222 aa9.49□□□□□ -0.89
CLPB-210ENST00000539148 DEAF1O75398 565 aaPredicted RBP9.49□□□□□ -0.89
CLPB-210ENST00000539148 CBX7O95931 251 aa9.49□□□□□ -0.89
CLPB-210ENST00000539148 IFNA14P01570 189 aa9.49□□□□□ -0.89
CLPB-210ENST00000539148 PRKAR1AP10644 381 aa9.49□□□□□ -0.89
CLPB-210ENST00000539148 TCN1P20061 433 aaPredicted RBP9.49□□□□□ -0.89
CLPB-210ENST00000539148 ENDOUP21128 410 aaKnown RBP9.49□□□□□ -0.89
CLPB-210ENST00000539148 S1PR1P21453 382 aa9.49□□□□□ -0.89
CLPB-210ENST00000539148 SSTR4P31391 388 aa9.49□□□□□ -0.89
CLPB-210ENST00000539148 CDKN2CP42773 168 aa9.49□□□□□ -0.89
CLPB-210ENST00000539148 CLK3P49761 638 aaKnown RBP9.49□□□□□ -0.89
CLPB-210ENST00000539148 EMDP50402 254 aa9.49□□□□□ -0.89
CLPB-210ENST00000539148 GPR143P51810 404 aa9.49□□□□□ -0.89
CLPB-210ENST00000539148 CRISP3P54108 245 aa9.49□□□□□ -0.89
CLPB-210ENST00000539148 POLE2P56282 527 aa9.49□□□□□ -0.89
CLPB-210ENST00000539148 DSTNP60981 165 aa9.49□□□□□ -0.89
CLPB-210ENST00000539148 POU6F2P78424 691 aaPredicted RBP9.49□□□□□ -0.89
CLPB-210ENST00000539148 DUSP2Q05923 314 aa9.49□□□□□ -0.89
CLPB-210ENST00000539148 EPS8Q12929 822 aa9.49□□□□□ -0.89
CLPB-210ENST00000539148 CHAF1BQ13112 559 aa9.49□□□□□ -0.89
CLPB-210ENST00000539148 EXOSC7Q15024 291 aaKnown RBP9.49□□□□□ -0.89
CLPB-210ENST00000539148 EBPQ15125 230 aaKnown RBP9.49□□□□□ -0.89
CLPB-210ENST00000539148 RGNQ15493 299 aa9.49□□□□□ -0.89
CLPB-210ENST00000539148 MEP1AQ16819 746 aa9.49□□□□□ -0.89
CLPB-210ENST00000539148 PRSS53Q2L4Q9 553 aa9.49□□□□□ -0.89
CLPB-210ENST00000539148 CRB2Q5IJ48 1285 aa9.49□□□□□ -0.89
CLPB-210ENST00000539148 TBCELQ5QJ74 424 aa9.49□□□□□ -0.89
CLPB-210ENST00000539148 AGAP7PQ5VUJ5 663 aa9.49□□□□□ -0.89
CLPB-210ENST00000539148 PRAMEF8Q5VWM4 474 aa9.49□□□□□ -0.89
CLPB-210ENST00000539148 PRAMEF7Q5VXH5 474 aa9.49□□□□□ -0.89
CLPB-210ENST00000539148 RPS19BP1Q86WX3 136 aaKnown RBP9.49□□□□□ -0.89
CLPB-210ENST00000539148 RNF130Q86XS8 419 aa9.49□□□□□ -0.89
CLPB-210ENST00000539148 GPALPP1Q8IXQ4 340 aa9.49□□□□□ -0.89
CLPB-210ENST00000539148 MARVELD2Q8N4S9 558 aa9.49□□□□□ -0.89
CLPB-210ENST00000539148 APCDD1LQ8NCL9 501 aa9.49□□□□□ -0.89
CLPB-210ENST00000539148 C11orf65Q8NCR3 313 aa9.49□□□□□ -0.89
CLPB-210ENST00000539148 THOC3Q96J01 351 aaKnown RBP9.49□□□□□ -0.89
CLPB-210ENST00000539148 RDH12Q96NR8 316 aa9.49□□□□□ -0.89
CLPB-210ENST00000539148 AGAP4Q96P64 663 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms