RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 PRIM2P49643 509 aa15.96■□□□□ 0.15
CLN6-202ENST00000538696 KHKP50053 298 aa15.96■□□□□ 0.15
CLN6-202ENST00000538696 SLC37A1P57057 533 aa15.96■□□□□ 0.15
CLN6-202ENST00000538696 RBBP4Q09028 425 aa15.96■□□□□ 0.15
CLN6-202ENST00000538696 TMEM102Q8N9M5 508 aaPredicted RBP15.96■□□□□ 0.15
CLN6-202ENST00000538696 OR7G1Q8NGA0 311 aa15.96■□□□□ 0.15
CLN6-202ENST00000538696 RAB8BQ92930 207 aa15.96■□□□□ 0.15
CLN6-202ENST00000538696 OTUB1Q96FW1 271 aaPredicted RBP15.96■□□□□ 0.15
CLN6-202ENST00000538696 C16orf58Q96GQ5 468 aa15.96■□□□□ 0.15
CLN6-202ENST00000538696 SEPHS2Q99611 448 aa15.96■□□□□ 0.15
CLN6-202ENST00000538696 YIPF4Q9BSR8 244 aa15.96■□□□□ 0.15
CLN6-202ENST00000538696 OR10A5Q9H207 317 aa15.96■□□□□ 0.15
CLN6-202ENST00000538696 C3orf14Q9HBI5 128 aa15.96■□□□□ 0.15
CLN6-202ENST00000538696 A4GALTQ9NPC4 353 aa15.96■□□□□ 0.15
CLN6-202ENST00000538696 OLAHQ9NV23 265 aa15.96■□□□□ 0.15
CLN6-202ENST00000538696 DDX18Q9NVP1 670 aaKnown RBP15.96■□□□□ 0.15
CLN6-202ENST00000538696 ARMC1Q9NVT9 282 aa15.96■□□□□ 0.15
CLN6-202ENST00000538696 C6orf203Q9P0P8 240 aaPredicted RBP15.96■□□□□ 0.15
CLN6-202ENST00000538696 COPS7AQ9UBW8 275 aa15.96■□□□□ 0.15
CLN6-202ENST00000538696 ZMIZ1Q9ULJ6 1067 aa15.96■□□□□ 0.15
CLN6-202ENST00000538696 C19orf53Q9UNZ5 99 aaPredicted RBP15.96■□□□□ 0.15
CLN6-202ENST00000538696 EXPH5Q8NEV8 1989 aa15.96■□□□□ 0.15
CLN6-202ENST00000538696 ZFHX4Q86UP3 3567 aa15.95■□□□□ 0.14
CLN6-202ENST00000538696 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.95■□□□□ 0.14
CLN6-202ENST00000538696 HMGN4O00479 90 aa15.95■□□□□ 0.14
CLN6-202ENST00000538696 PRKNO60260 465 aaPredicted RBP15.95■□□□□ 0.14
CLN6-202ENST00000538696 TPST1O60507 370 aa15.95■□□□□ 0.14
CLN6-202ENST00000538696 PRAMEF2O60811 474 aa15.95■□□□□ 0.14
CLN6-202ENST00000538696 NME6O75414 186 aaPredicted RBP15.95■□□□□ 0.14
CLN6-202ENST00000538696 GCM2O75603 506 aaPredicted RBP15.95■□□□□ 0.14
CLN6-202ENST00000538696 PRKD3O94806 890 aa15.95■□□□□ 0.14
CLN6-202ENST00000538696 SERPINA7P05543 415 aa15.95■□□□□ 0.14
CLN6-202ENST00000538696 OR12D1P0DN82 309 aa15.95■□□□□ 0.14
CLN6-202ENST00000538696 ITGAMP11215 1152 aa15.95■□□□□ 0.14
CLN6-202ENST00000538696 MATN1P21941 496 aa15.95■□□□□ 0.14
CLN6-202ENST00000538696 AQP1P29972 269 aa15.95■□□□□ 0.14
CLN6-202ENST00000538696 KDELR2P33947 212 aa15.95■□□□□ 0.14
CLN6-202ENST00000538696 GCKP35557 465 aa15.95■□□□□ 0.14
CLN6-202ENST00000538696 CLCN2P51788 898 aa15.95■□□□□ 0.14
CLN6-202ENST00000538696 RRADP55042 308 aa15.95■□□□□ 0.14
CLN6-202ENST00000538696 PRR5P85299 388 aa15.95■□□□□ 0.14
CLN6-202ENST00000538696 CDK6Q00534 326 aa15.95■□□□□ 0.14
CLN6-202ENST00000538696 AIMP2Q13155 320 aaKnown RBP15.95■□□□□ 0.14
CLN6-202ENST00000538696 LASP1Q14847 261 aaKnown RBP15.95■□□□□ 0.14
CLN6-202ENST00000538696 ZNF630Q2M218 657 aaPredicted RBP15.95■□□□□ 0.14
CLN6-202ENST00000538696 HMBOX1Q6NT76 420 aa15.95■□□□□ 0.14
CLN6-202ENST00000538696 C9orf40Q8IXQ3 194 aa15.95■□□□□ 0.14
CLN6-202ENST00000538696 KBTBD2Q8IY47 623 aa15.95■□□□□ 0.14
CLN6-202ENST00000538696 PAPD5Q8NDF8 572 aaKnown RBP15.95■□□□□ 0.14
CLN6-202ENST00000538696 OR5D16Q8NGK9 328 aa15.95■□□□□ 0.14
CLN6-202ENST00000538696 LRTOMTQ8WZ04 291 aa15.95■□□□□ 0.14
CLN6-202ENST00000538696 GIMAP5Q96F15 307 aa15.95■□□□□ 0.14
CLN6-202ENST00000538696 ATP13A2Q9NQ11 1180 aa15.95■□□□□ 0.14
CLN6-202ENST00000538696 EQTNQ9NQ60 294 aa15.95■□□□□ 0.14
CLN6-202ENST00000538696 NTMQ9P121 344 aa15.95■□□□□ 0.14
CLN6-202ENST00000538696 DTX4Q9Y2E6 619 aa15.95■□□□□ 0.14
CLN6-202ENST00000538696 COQ9O75208 318 aa15.94■□□□□ 0.14
CLN6-202ENST00000538696 HMGN2P05204 90 aaKnown RBP15.94■□□□□ 0.14
CLN6-202ENST00000538696 EMDP50402 254 aa15.94■□□□□ 0.14
CLN6-202ENST00000538696 CRYBA2P53672 197 aa15.94■□□□□ 0.14
CLN6-202ENST00000538696 EBPQ15125 230 aaKnown RBP15.94■□□□□ 0.14
CLN6-202ENST00000538696 MAPK11Q15759 364 aa15.94■□□□□ 0.14
CLN6-202ENST00000538696 BHLHB9Q6PI77 547 aa15.94■□□□□ 0.14
CLN6-202ENST00000538696 OR10Q1Q8NGQ4 319 aa15.94■□□□□ 0.14
CLN6-202ENST00000538696 C16orf52Q8NHV5 167 aa15.94■□□□□ 0.14
CLN6-202ENST00000538696 MS4A4EQ96PG1 132 aa15.94■□□□□ 0.14
CLN6-202ENST00000538696 TACO1Q9BSH4 297 aaKnown RBP15.94■□□□□ 0.14
CLN6-202ENST00000538696 ING2Q9H160 280 aa15.94■□□□□ 0.14
CLN6-202ENST00000538696 ANGPT4Q9Y264 503 aa15.94■□□□□ 0.14
CLN6-202ENST00000538696 KCNMB2Q9Y691 235 aa15.94■□□□□ 0.14
CLN6-202ENST00000538696 ANKRD11Q6UB99 2663 aaPredicted RBP15.94■□□□□ 0.14
CLN6-202ENST00000538696 PRAMEF27A3QJZ7 478 aa15.94■□□□□ 0.14
CLN6-202ENST00000538696 OR6C76A6NM76 312 aa15.94■□□□□ 0.14
CLN6-202ENST00000538696 CASQ2O14958 399 aaPredicted RBP15.94■□□□□ 0.14
CLN6-202ENST00000538696 ZNF682O95780 498 aa15.94■□□□□ 0.14
CLN6-202ENST00000538696 MT-ND1P03886 318 aa15.94■□□□□ 0.14
CLN6-202ENST00000538696 BCHEP06276 602 aa15.94■□□□□ 0.14
CLN6-202ENST00000538696 ICAM2P13598 275 aa15.94■□□□□ 0.14
CLN6-202ENST00000538696 PEX2P28328 305 aa15.94■□□□□ 0.14
CLN6-202ENST00000538696 MAGEA8P43361 318 aa15.94■□□□□ 0.14
CLN6-202ENST00000538696 CXADRP78310 365 aa15.94■□□□□ 0.14
CLN6-202ENST00000538696 RNF4P78317 190 aa15.94■□□□□ 0.14
CLN6-202ENST00000538696 TRIP10Q15642 601 aa15.94■□□□□ 0.14
CLN6-202ENST00000538696 RPS26P11Q5JNZ5 115 aaPredicted RBP15.94■□□□□ 0.14
CLN6-202ENST00000538696 LPCAT4Q643R3 524 aa15.94■□□□□ 0.14
CLN6-202ENST00000538696 HSDL2Q6YN16 418 aa15.94■□□□□ 0.14
CLN6-202ENST00000538696 CCDC80Q76M96 950 aa15.94■□□□□ 0.14
CLN6-202ENST00000538696 WDR53Q7Z5U6 358 aaPredicted RBP15.94■□□□□ 0.14
CLN6-202ENST00000538696 SLC44A2Q8IWA5 706 aaPredicted RBP15.94■□□□□ 0.14
CLN6-202ENST00000538696 EID3Q8N140 333 aa15.94■□□□□ 0.14
CLN6-202ENST00000538696 CLEC1AQ8NC01 280 aa15.94■□□□□ 0.14
CLN6-202ENST00000538696 MIPOL1Q8TD10 442 aa15.94■□□□□ 0.14
CLN6-202ENST00000538696 BRIX1Q8TDN6 353 aaKnown RBP15.94■□□□□ 0.14
CLN6-202ENST00000538696 SNRNP27Q8WVK2 155 aaKnown RBP15.94■□□□□ 0.14
CLN6-202ENST00000538696 SLC47A1Q96FL8 570 aa15.94■□□□□ 0.14
CLN6-202ENST00000538696 TMEM19Q96HH6 336 aa15.94■□□□□ 0.14
CLN6-202ENST00000538696 THOC3Q96J01 351 aaKnown RBP15.94■□□□□ 0.14
CLN6-202ENST00000538696 RNF145Q96MT1 663 aa15.94■□□□□ 0.14
CLN6-202ENST00000538696 ITPAQ9BY32 194 aa15.94■□□□□ 0.14
CLN6-202ENST00000538696 UGT2B28Q9BY64 529 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms