RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 C19orf67A6NJJ6 358 aa13.16□□□□□ -0.3
ACTN1-205ENST00000538545 HNRNPCL2B2RXH8 293 aa13.16□□□□□ -0.3
ACTN1-205ENST00000538545 HNRNPCL3B7ZW38 293 aa13.16□□□□□ -0.3
ACTN1-205ENST00000538545 DPM1O60762 260 aa13.16□□□□□ -0.3
ACTN1-205ENST00000538545 THY1P04216 161 aa13.16□□□□□ -0.3
ACTN1-205ENST00000538545 HNRNPCL4P0DMR1 293 aa13.16□□□□□ -0.3
ACTN1-205ENST00000538545 ANXA8P13928 327 aa13.16□□□□□ -0.3
ACTN1-205ENST00000538545 TNNI3P19429 210 aa13.16□□□□□ -0.3
ACTN1-205ENST00000538545 C21orf33P30042 268 aaPredicted RBP13.16□□□□□ -0.3
ACTN1-205ENST00000538545 EFNA3P52797 238 aa13.16□□□□□ -0.3
ACTN1-205ENST00000538545 RELAQ04206 551 aa13.16□□□□□ -0.3
ACTN1-205ENST00000538545 MAP4K2Q12851 820 aa13.16□□□□□ -0.3
ACTN1-205ENST00000538545 KEAP1Q14145 624 aa13.16□□□□□ -0.3
ACTN1-205ENST00000538545 PUS10Q3MIT2 529 aaKnown RBP13.16□□□□□ -0.3
ACTN1-205ENST00000538545 SHISA6Q6ZSJ9 500 aa13.16□□□□□ -0.3
ACTN1-205ENST00000538545 NKAIN4Q8IVV8 208 aa13.16□□□□□ -0.3
ACTN1-205ENST00000538545 COX18Q8N8Q8 333 aa13.16□□□□□ -0.3
ACTN1-205ENST00000538545 OR51Q1Q8NH59 317 aa13.16□□□□□ -0.3
ACTN1-205ENST00000538545 RNF217Q8TC41 542 aa13.16□□□□□ -0.3
ACTN1-205ENST00000538545 ELF4Q99607 663 aaPredicted RBP13.16□□□□□ -0.3
ACTN1-205ENST00000538545 GABARAPL3Q9BY60 117 aa13.16□□□□□ -0.3
ACTN1-205ENST00000538545 ZNF556Q9HAH1 456 aa13.16□□□□□ -0.3
ACTN1-205ENST00000538545 ZNF226Q9NYT6 803 aa13.16□□□□□ -0.3
ACTN1-205ENST00000538545 IL20RAQ9UHF4 553 aa13.16□□□□□ -0.3
ACTN1-205ENST00000538545 H3BN98 237 aa13.15□□□□□ -0.3
ACTN1-205ENST00000538545 HRO43593 1189 aa13.15□□□□□ -0.3
ACTN1-205ENST00000538545 FAM20BO75063 409 aa13.15□□□□□ -0.3
ACTN1-205ENST00000538545 FADS2O95864 444 aaKnown RBP13.15□□□□□ -0.3
ACTN1-205ENST00000538545 CNR2P34972 360 aa13.15□□□□□ -0.3
ACTN1-205ENST00000538545 ZNF155Q12901 538 aaPredicted RBP13.15□□□□□ -0.3
ACTN1-205ENST00000538545 WDR45BQ5MNZ6 344 aa13.15□□□□□ -0.3
ACTN1-205ENST00000538545 RBM48Q5RL73 367 aaKnown RBP13.15□□□□□ -0.3
ACTN1-205ENST00000538545 DCST2Q5T1A1 773 aa13.15□□□□□ -0.3
ACTN1-205ENST00000538545 BROXQ5VW32 411 aa13.15□□□□□ -0.3
ACTN1-205ENST00000538545 LYSMD4Q5XG99 296 aa13.15□□□□□ -0.3
ACTN1-205ENST00000538545 PGBD2Q6P3X8 592 aa13.15□□□□□ -0.3
ACTN1-205ENST00000538545 ZNF836Q6ZNA1 936 aa13.15□□□□□ -0.3
ACTN1-205ENST00000538545 ARHGAP22Q7Z5H3 698 aa13.15□□□□□ -0.3
ACTN1-205ENST00000538545 ZER1Q7Z7L7 766 aa13.15□□□□□ -0.3
ACTN1-205ENST00000538545 VWA5B2Q8N398 1253 aa13.15□□□□□ -0.3
ACTN1-205ENST00000538545 SDR16C5Q8N3Y7 309 aa13.15□□□□□ -0.3
ACTN1-205ENST00000538545 ADAMTS16Q8TE57 1224 aa13.15□□□□□ -0.3
ACTN1-205ENST00000538545 MOAP1Q96BY2 351 aa13.15□□□□□ -0.3
ACTN1-205ENST00000538545 TRNT1Q96Q11 434 aaKnown RBP13.15□□□□□ -0.3
ACTN1-205ENST00000538545 APOL4Q9BPW4 351 aa13.15□□□□□ -0.3
ACTN1-205ENST00000538545 NECTIN3Q9NQS3 549 aa13.15□□□□□ -0.3
ACTN1-205ENST00000538545 CNIH4Q9P003 139 aa13.15□□□□□ -0.3
ACTN1-205ENST00000538545 TMCC3Q9ULS5 477 aa13.15□□□□□ -0.3
ACTN1-205ENST00000538545 SLC9A8Q9Y2E8 581 aa13.15□□□□□ -0.3
ACTN1-205ENST00000538545 ABCB7O75027 752 aa13.15□□□□□ -0.3
ACTN1-205ENST00000538545 OR2B3O76000 313 aa13.15□□□□□ -0.3
ACTN1-205ENST00000538545 IFNA16P05015 189 aa13.15□□□□□ -0.3
ACTN1-205ENST00000538545 MMP11P24347 488 aa13.15□□□□□ -0.3
ACTN1-205ENST00000538545 CD1CP29017 333 aa13.15□□□□□ -0.3
ACTN1-205ENST00000538545 CTSKP43235 329 aa13.15□□□□□ -0.3
ACTN1-205ENST00000538545 TAS2R41P59536 307 aa13.15□□□□□ -0.3
ACTN1-205ENST00000538545 EMX1Q04741 257 aaPredicted RBP13.15□□□□□ -0.3
ACTN1-205ENST00000538545 DGCR6Q14129 220 aa13.15□□□□□ -0.3
ACTN1-205ENST00000538545 HEPHL1Q6MZM0 1159 aa13.15□□□□□ -0.3
ACTN1-205ENST00000538545 OR4K5Q8NGD3 323 aa13.15□□□□□ -0.3
ACTN1-205ENST00000538545 FBLIM1Q8WUP2 373 aa13.15□□□□□ -0.3
ACTN1-205ENST00000538545 ISOC1Q96CN7 298 aa13.15□□□□□ -0.3
ACTN1-205ENST00000538545 NODALQ96S42 347 aa13.15□□□□□ -0.3
ACTN1-205ENST00000538545 EPB41L1Q9H4G0 881 aa13.15□□□□□ -0.3
ACTN1-205ENST00000538545 ARMC7Q9H6L4 198 aa13.15□□□□□ -0.3
ACTN1-205ENST00000538545 TAS2R16Q9NYV7 291 aa13.15□□□□□ -0.3
ACTN1-205ENST00000538545 RSL24D1Q9UHA3 163 aaKnown RBP13.15□□□□□ -0.3
ACTN1-205ENST00000538545 PLCL2Q9UPR0 1127 aa13.15□□□□□ -0.3
ACTN1-205ENST00000538545 POFUT2Q9Y2G5 429 aa13.15□□□□□ -0.3
ACTN1-205ENST00000538545 DSPPQ9NZW4 1301 aa13.15□□□□□ -0.3
ACTN1-205ENST00000538545 ALPK2Q86TB3 2170 aa13.14□□□□□ -0.31
ACTN1-205ENST00000538545 GDF9O60383 454 aa13.14□□□□□ -0.31
ACTN1-205ENST00000538545 SRPX2O60687 465 aaPredicted RBP13.14□□□□□ -0.31
ACTN1-205ENST00000538545 MT-ND2P03891 347 aa13.14□□□□□ -0.31
ACTN1-205ENST00000538545 CFIP05156 583 aa13.14□□□□□ -0.31
ACTN1-205ENST00000538545 ADRA2AP08913 450 aa13.14□□□□□ -0.31
ACTN1-205ENST00000538545 S1PR1P21453 382 aa13.14□□□□□ -0.31
ACTN1-205ENST00000538545 MASP1P48740 699 aa13.14□□□□□ -0.31
ACTN1-205ENST00000538545 PSG6Q00889 435 aa13.14□□□□□ -0.31
ACTN1-205ENST00000538545 CSTF1Q05048 431 aaKnown RBP13.14□□□□□ -0.31
ACTN1-205ENST00000538545 MANEAQ5SRI9 462 aa13.14□□□□□ -0.31
ACTN1-205ENST00000538545 GUSBP11Q6P575 273 aa13.14□□□□□ -0.31
ACTN1-205ENST00000538545 UBALD2Q8IYN6 164 aa13.14□□□□□ -0.31
ACTN1-205ENST00000538545 OR1L3Q8NH93 324 aa13.14□□□□□ -0.31
ACTN1-205ENST00000538545 TANKQ92844 425 aa13.14□□□□□ -0.31
ACTN1-205ENST00000538545 RIT1Q92963 219 aa13.14□□□□□ -0.31
ACTN1-205ENST00000538545 TSLPQ969D9 159 aa13.14□□□□□ -0.31
ACTN1-205ENST00000538545 CCDC74AQ96AQ1 378 aa13.14□□□□□ -0.31
ACTN1-205ENST00000538545 C12orf43Q96C57 262 aaKnown RBP13.14□□□□□ -0.31
ACTN1-205ENST00000538545 RBM18Q96H35 190 aaKnown RBP13.14□□□□□ -0.31
ACTN1-205ENST00000538545 PITX2Q99697 317 aa13.14□□□□□ -0.31
ACTN1-205ENST00000538545 DSN1Q9H410 356 aa13.14□□□□□ -0.31
ACTN1-205ENST00000538545 PRTFDC1Q9NRG1 225 aa13.14□□□□□ -0.31
ACTN1-205ENST00000538545 PTGFRNQ9P2B2 879 aa13.14□□□□□ -0.31
ACTN1-205ENST00000538545 ERVK-19Q9WJR5 959 aa13.14□□□□□ -0.31
ACTN1-205ENST00000538545 A0A087WUU8 490 aa13.14□□□□□ -0.31
ACTN1-205ENST00000538545 SH3PXD2BA1X283 911 aa13.14□□□□□ -0.31
ACTN1-205ENST00000538545 PIP5K1CO60331 668 aa13.14□□□□□ -0.31
ACTN1-205ENST00000538545 ATE1O95260 518 aa13.14□□□□□ -0.31
ACTN1-205ENST00000538545 IGKV1D-16P01601 117 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms