RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 SYNCQ9H7C4 482 aa4.83□□□□□ -1.64
CLIP1-207ENST00000536634 ZNF624Q9P2J8 865 aaPredicted RBP4.83□□□□□ -1.64
CLIP1-207ENST00000536634 FBXL17Q9UF56 701 aa4.83□□□□□ -1.64
CLIP1-207ENST00000536634 KCNK6Q9Y257 313 aa4.83□□□□□ -1.64
CLIP1-207ENST00000536634 JRKLQ9Y4A0 524 aa4.83□□□□□ -1.64
CLIP1-207ENST00000536634 LYVE1Q9Y5Y7 322 aa4.83□□□□□ -1.64
CLIP1-207ENST00000536634 PCM1Q15154 2024 aa4.82□□□□□ -1.64
CLIP1-207ENST00000536634 C19orf84I3L1E1 186 aa4.82□□□□□ -1.64
CLIP1-207ENST00000536634 P4HA2O15460 535 aa4.82□□□□□ -1.64
CLIP1-207ENST00000536634 CIDEAO60543 219 aa4.82□□□□□ -1.64
CLIP1-207ENST00000536634 NADKO95544 446 aaPredicted RBP4.82□□□□□ -1.64
CLIP1-207ENST00000536634 INHBAP08476 426 aa4.82□□□□□ -1.64
CLIP1-207ENST00000536634 FOLR1P15328 257 aa4.82□□□□□ -1.64
CLIP1-207ENST00000536634 CMA1P23946 247 aa4.82□□□□□ -1.64
CLIP1-207ENST00000536634 HADHAP40939 763 aa4.82□□□□□ -1.64
CLIP1-207ENST00000536634 SYKP43405 635 aa4.82□□□□□ -1.64
CLIP1-207ENST00000536634 ATP12AP54707 1039 aa4.82□□□□□ -1.64
CLIP1-207ENST00000536634 RPS15P62841 145 aaKnown RBP4.82□□□□□ -1.64
CLIP1-207ENST00000536634 ART3Q13508 389 aa4.82□□□□□ -1.64
CLIP1-207ENST00000536634 PNOCQ13519 176 aa4.82□□□□□ -1.64
CLIP1-207ENST00000536634 PEX6Q13608 980 aa4.82□□□□□ -1.64
CLIP1-207ENST00000536634 CDO1Q16878 200 aa4.82□□□□□ -1.64
CLIP1-207ENST00000536634 CCDC40Q4G0X9 1142 aa4.82□□□□□ -1.64
CLIP1-207ENST00000536634 TMEM154Q6P9G4 183 aa4.82□□□□□ -1.64
CLIP1-207ENST00000536634 FAM92BQ6ZTR7 304 aa4.82□□□□□ -1.64
CLIP1-207ENST00000536634 PRSS42Q7Z5A4 293 aa4.82□□□□□ -1.64
CLIP1-207ENST00000536634 HPS6Q86YV9 775 aa4.82□□□□□ -1.64
CLIP1-207ENST00000536634 RTL3Q8N8U3 475 aaKnown RBP4.82□□□□□ -1.64
CLIP1-207ENST00000536634 CCDC47Q96A33 483 aaKnown RBP4.82□□□□□ -1.64
CLIP1-207ENST00000536634 SMIM14Q96QK8 99 aa4.82□□□□□ -1.64
CLIP1-207ENST00000536634 TSG101Q99816 390 aa4.82□□□□□ -1.64
CLIP1-207ENST00000536634 CRACR2AQ9BSW2 395 aa4.82□□□□□ -1.64
CLIP1-207ENST00000536634 ILKAPQ9H0C8 392 aaPredicted RBP4.82□□□□□ -1.64
CLIP1-207ENST00000536634 GOLPH3LQ9H4A5 285 aa4.82□□□□□ -1.64
CLIP1-207ENST00000536634 ATP13A3Q9H7F0 1226 aa4.82□□□□□ -1.64
CLIP1-207ENST00000536634 PTTG2Q9NZH5 202 aa4.82□□□□□ -1.64
CLIP1-207ENST00000536634 CD84Q9UIB8 345 aa4.82□□□□□ -1.64
CLIP1-207ENST00000536634 FARSAQ9Y285 508 aaKnown RBP4.82□□□□□ -1.64
CLIP1-207ENST00000536634 CMAHPQ9Y471 501 aa4.82□□□□□ -1.64
CLIP1-207ENST00000536634 NCOA6Q14686 2063 aaPredicted RBP4.82□□□□□ -1.64
CLIP1-207ENST00000536634 ANKRD12Q6UB98 2062 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 IGHV5-51A0A0C4DH38 117 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 TEX13DA0A0J9YY54 714 aaPredicted RBP4.81□□□□□ -1.64
CLIP1-207ENST00000536634 SMIM1B2RUZ4 78 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 PRAMEF11O60813 436 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 TMCC2O75069 709 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 PTP4A3O75365 173 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 TSHBP01222 138 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 MT-ND3P03897 115 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 CAPN1P07384 714 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 TUBBP07437 444 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 STSP08842 583 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 F3P13726 295 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 COX6B1P14854 86 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 NELFEP18615 380 aaKnown RBP4.81□□□□□ -1.64
CLIP1-207ENST00000536634 PON1P27169 355 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 TEAD1P28347 426 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 HTR1EP28566 365 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 GPR1P46091 355 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 CAPZBP47756 277 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 CSNK1DP48730 415 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 NR0B1P51843 470 aaKnown RBP4.81□□□□□ -1.64
CLIP1-207ENST00000536634 TUBB4BP68371 445 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 PPP2R2BQ00005 443 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 LRRC63Q05C16 580 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 BCL2L1Q07817 233 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 CETN1Q12798 172 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 CRYMQ14894 314 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 KYNUQ16719 465 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 ZNF630Q2M218 657 aaPredicted RBP4.81□□□□□ -1.64
CLIP1-207ENST00000536634 CCDC14Q49A88 953 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 NDUFAF5Q5TEU4 345 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 ARHGAP11AQ6P4F7 1023 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 TRIM65Q6PJ69 517 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 FAM198BQ6UWH4 519 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 Q6ZS92 163 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 C1orf122Q6ZSJ8 110 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 TMEM26Q6ZUK4 368 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 TRPT1Q86TN4 253 aaKnown RBP4.81□□□□□ -1.64
CLIP1-207ENST00000536634 PTOV1Q86YD1 416 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 PPHLN1Q8NEY8 458 aaKnown RBP4.81□□□□□ -1.64
CLIP1-207ENST00000536634 GRHL3Q8TE85 626 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 ZNF473Q8WTR7 871 aaKnown RBP4.81□□□□□ -1.64
CLIP1-207ENST00000536634 SMPDL3BQ92485 455 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 SHC3Q92529 594 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 MR1Q95460 341 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 SENP5Q96HI0 755 aaPredicted RBP4.81□□□□□ -1.64
CLIP1-207ENST00000536634 COX14Q96I36 57 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 CELF6Q96J87 481 aaKnown RBP4.81□□□□□ -1.64
CLIP1-207ENST00000536634 DDOQ99489 341 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 LITAFQ99732 161 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 PSD2Q9BQI7 771 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 HGH1Q9BTY7 390 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 MLPHQ9BV36 600 aaPredicted RBP4.81□□□□□ -1.64
CLIP1-207ENST00000536634 ABCG8Q9H221 673 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 LRRC19Q9H756 370 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 SLC52A3Q9NQ40 469 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 C5AR2Q9P296 337 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 ACAD8Q9UKU7 415 aa4.81□□□□□ -1.64
CLIP1-207ENST00000536634 SNX7Q9UNH6 387 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms