RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 CCT5P48643 541 aa11.93□□□□□ -0.5
RTN3-207ENST00000536011 HTR6P50406 440 aa11.93□□□□□ -0.5
RTN3-207ENST00000536011 NCBP2P52298 156 aaKnown RBP eCLIP11.93□□□□□ -0.5
RTN3-207ENST00000536011 CORO7P57737 925 aa11.93□□□□□ -0.5
RTN3-207ENST00000536011 BTKQ06187 659 aa11.93□□□□□ -0.5
RTN3-207ENST00000536011 C2orf80Q0P641 193 aa11.93□□□□□ -0.5
RTN3-207ENST00000536011 GAB1Q13480 694 aa11.93□□□□□ -0.5
RTN3-207ENST00000536011 CCDC153Q494R4 210 aa11.93□□□□□ -0.5
RTN3-207ENST00000536011 ZYG11AQ6WRX3 759 aa11.93□□□□□ -0.5
RTN3-207ENST00000536011 IKBIPQ70UQ0 350 aa11.93□□□□□ -0.5
RTN3-207ENST00000536011 SLC44A2Q8IWA5 706 aaPredicted RBP11.93□□□□□ -0.5
RTN3-207ENST00000536011 TRIM42Q8IWZ5 723 aa11.93□□□□□ -0.5
RTN3-207ENST00000536011 HOMEZQ8IX15 550 aa11.93□□□□□ -0.5
RTN3-207ENST00000536011 WDSUB1Q8N9V3 476 aa11.93□□□□□ -0.5
RTN3-207ENST00000536011 OR4K17Q8NGC6 315 aa11.93□□□□□ -0.5
RTN3-207ENST00000536011 RDH11Q8TC12 318 aa11.93□□□□□ -0.5
RTN3-207ENST00000536011 WNT2BQ93097 391 aa11.93□□□□□ -0.5
RTN3-207ENST00000536011 C11orf24Q96F05 449 aaPredicted RBP11.93□□□□□ -0.5
RTN3-207ENST00000536011 METTL2AQ96IZ6 378 aaKnown RBP11.93□□□□□ -0.5
RTN3-207ENST00000536011 SFXN2Q96NB2 322 aa11.93□□□□□ -0.5
RTN3-207ENST00000536011 UCN2Q96RP3 112 aa11.93□□□□□ -0.5
RTN3-207ENST00000536011 TUBA1CQ9BQE3 449 aa11.93□□□□□ -0.5
RTN3-207ENST00000536011 IQCGQ9H095 443 aaKnown RBP11.93□□□□□ -0.5
RTN3-207ENST00000536011 GSTO2Q9H4Y5 243 aa11.93□□□□□ -0.5
RTN3-207ENST00000536011 RRAGDQ9NQL2 400 aaPredicted RBP11.93□□□□□ -0.5
RTN3-207ENST00000536011 SDHAF3Q9NRP4 125 aa11.93□□□□□ -0.5
RTN3-207ENST00000536011 DDX18Q9NVP1 670 aaKnown RBP11.93□□□□□ -0.5
RTN3-207ENST00000536011 TBK1Q9UHD2 729 aa11.93□□□□□ -0.5
RTN3-207ENST00000536011 ST6GALNAC2Q9UJ37 374 aa11.93□□□□□ -0.5
RTN3-207ENST00000536011 ABCG2Q9UNQ0 655 aa11.93□□□□□ -0.5
RTN3-207ENST00000536011 TIMM22Q9Y584 194 aa11.93□□□□□ -0.5
RTN3-207ENST00000536011 FAM221AA4D161 298 aa11.92□□□□□ -0.5
RTN3-207ENST00000536011 KDM4EB2RXH2 506 aaPredicted RBP11.92□□□□□ -0.5
RTN3-207ENST00000536011 RSL1D1O76021 490 aaKnown RBP11.92□□□□□ -0.5
RTN3-207ENST00000536011 RCBTB2O95199 551 aa11.92□□□□□ -0.5
RTN3-207ENST00000536011 EPXP11678 715 aa11.92□□□□□ -0.5
RTN3-207ENST00000536011 GRK2P25098 689 aa11.92□□□□□ -0.5
RTN3-207ENST00000536011 EVI2BP34910 448 aa11.92□□□□□ -0.5
RTN3-207ENST00000536011 CLK3P49761 638 aaKnown RBP11.92□□□□□ -0.5
RTN3-207ENST00000536011 IST1P53990 364 aa11.92□□□□□ -0.5
RTN3-207ENST00000536011 PSMD4P55036 377 aaKnown RBP11.92□□□□□ -0.5
RTN3-207ENST00000536011 DIO3P55073 304 aa11.92□□□□□ -0.5
RTN3-207ENST00000536011 GFRA1P56159 465 aa11.92□□□□□ -0.5
RTN3-207ENST00000536011 SRYQ05066 204 aa11.92□□□□□ -0.5
RTN3-207ENST00000536011 GANABQ14697 944 aaKnown RBP11.92□□□□□ -0.5
RTN3-207ENST00000536011 DAZAP2Q15038 168 aaPredicted RBP11.92□□□□□ -0.5
RTN3-207ENST00000536011 DECR1Q16698 335 aa11.92□□□□□ -0.5
RTN3-207ENST00000536011 CYP27C1Q4G0S4 372 aa11.92□□□□□ -0.5
RTN3-207ENST00000536011 DESI1Q6ICB0 168 aa11.92□□□□□ -0.5
RTN3-207ENST00000536011 POMZP3Q6PJE2 187 aa11.92□□□□□ -0.5
RTN3-207ENST00000536011 FRMD7Q6ZUT3 714 aa11.92□□□□□ -0.5
RTN3-207ENST00000536011 CHMP1BQ7LBR1 199 aa11.92□□□□□ -0.5
RTN3-207ENST00000536011 GRAMD2AQ8IUY3 354 aa11.92□□□□□ -0.5
RTN3-207ENST00000536011 EIF1ADQ8N9N8 165 aaKnown RBP11.92□□□□□ -0.5
RTN3-207ENST00000536011 C9orf106Q8NAJ2 232 aa11.92□□□□□ -0.5
RTN3-207ENST00000536011 OR7G2Q8NG99 324 aa11.92□□□□□ -0.5
RTN3-207ENST00000536011 KCNA7Q96RP8 456 aa11.92□□□□□ -0.5
RTN3-207ENST00000536011 EPB41L4BQ9H329 900 aa11.92□□□□□ -0.5
RTN3-207ENST00000536011 PIGMQ9H3S5 423 aa11.92□□□□□ -0.5
RTN3-207ENST00000536011 C3orf14Q9HBI5 128 aa11.92□□□□□ -0.5
RTN3-207ENST00000536011 HHATLQ9HCP6 504 aa11.92□□□□□ -0.5
RTN3-207ENST00000536011 MYNNQ9NPC7 610 aa11.92□□□□□ -0.5
RTN3-207ENST00000536011 TAS2R7Q9NYW3 318 aa11.92□□□□□ -0.5
RTN3-207ENST00000536011 JKAMPQ9P055 326 aa11.92□□□□□ -0.5
RTN3-207ENST00000536011 PPP4R1LQ9P1A2 415 aa11.92□□□□□ -0.5
RTN3-207ENST00000536011 MID2Q9UJV3 735 aa11.92□□□□□ -0.5
RTN3-207ENST00000536011 CBLCQ9ULV8 474 aa11.92□□□□□ -0.5
RTN3-207ENST00000536011 MED13LQ71F56 2210 aa11.92□□□□□ -0.5
RTN3-207ENST00000536011 TTC36A6NLP5 189 aa11.91□□□□□ -0.5
RTN3-207ENST00000536011 CLCA1A8K7I4 914 aa11.91□□□□□ -0.5
RTN3-207ENST00000536011 MYO1GB0I1T2 1018 aa11.91□□□□□ -0.5
RTN3-207ENST00000536011 LINC01387J3KSC0 135 aa11.91□□□□□ -0.5
RTN3-207ENST00000536011 JUNP05412 331 aaKnown RBP11.91□□□□□ -0.5
RTN3-207ENST00000536011 IFI6P09912 130 aa11.91□□□□□ -0.5
RTN3-207ENST00000536011 DPP4P27487 766 aa11.91□□□□□ -0.5
RTN3-207ENST00000536011 LHX2P50458 406 aa11.91□□□□□ -0.5
RTN3-207ENST00000536011 DSCR4P56555 118 aaPredicted RBP11.91□□□□□ -0.5
RTN3-207ENST00000536011 EEFSECP57772 596 aaKnown RBP11.91□□□□□ -0.5
RTN3-207ENST00000536011 DNAJB13P59910 316 aa11.91□□□□□ -0.5
RTN3-207ENST00000536011 PPP2R2AP63151 447 aa11.91□□□□□ -0.5
RTN3-207ENST00000536011 SNTB1Q13884 538 aaKnown RBP11.91□□□□□ -0.5
RTN3-207ENST00000536011 BCL2A1Q16548 175 aa11.91□□□□□ -0.5
RTN3-207ENST00000536011 OR2A2Q6IF42 318 aa11.91□□□□□ -0.5
RTN3-207ENST00000536011 FAM71E1Q6IPT2 247 aa11.91□□□□□ -0.5
RTN3-207ENST00000536011 NPSR1Q6W5P4 371 aa11.91□□□□□ -0.5
RTN3-207ENST00000536011 TRIM46Q7Z4K8 759 aa11.91□□□□□ -0.5
RTN3-207ENST00000536011 CAMKMTQ7Z624 323 aa11.91□□□□□ -0.5
RTN3-207ENST00000536011 ADGRE4PQ86SQ3 457 aa11.91□□□□□ -0.5
RTN3-207ENST00000536011 CDC20BQ86Y33 519 aa11.91□□□□□ -0.5
RTN3-207ENST00000536011 CCDC63Q8NA47 563 aa11.91□□□□□ -0.5
RTN3-207ENST00000536011 MZB1Q8WU39 189 aa11.91□□□□□ -0.5
RTN3-207ENST00000536011 RNF138Q8WVD3 245 aa11.91□□□□□ -0.5
RTN3-207ENST00000536011 NRGNQ92686 78 aa11.91□□□□□ -0.5
RTN3-207ENST00000536011 EFHD2Q96C19 240 aaPredicted RBP11.91□□□□□ -0.5
RTN3-207ENST00000536011 RHOXF2Q9BQY4 288 aa11.91□□□□□ -0.5
RTN3-207ENST00000536011 YIPF4Q9BSR8 244 aa11.91□□□□□ -0.5
RTN3-207ENST00000536011 RBM24Q9BX46 236 aaKnown RBP11.91□□□□□ -0.5
RTN3-207ENST00000536011 TXLNGYQ9BZA5 131 aa11.91□□□□□ -0.5
RTN3-207ENST00000536011 CXXC4Q9H2H0 198 aa11.91□□□□□ -0.5
RTN3-207ENST00000536011 PTGES2Q9H7Z7 377 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms