RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 ZFP64Q9NPA5 681 aa20.83■□□□□ 0.93
SFSWAP-204ENST00000535399 TCF7L2Q9NQB0 619 aa20.83■□□□□ 0.93
SFSWAP-204ENST00000535399 BOKQ9UMX3 212 aaPredicted RBP20.83■□□□□ 0.93
SFSWAP-204ENST00000535399 CLEC18AA5D8T8 446 aa20.82■□□□□ 0.92
SFSWAP-204ENST00000535399 ACOT7O00154 380 aa20.82■□□□□ 0.92
SFSWAP-204ENST00000535399 POLR3GO15318 223 aaPredicted RBP20.82■□□□□ 0.92
SFSWAP-204ENST00000535399 SNX4O95219 450 aa20.82■□□□□ 0.92
SFSWAP-204ENST00000535399 IL12BP29460 328 aa20.82■□□□□ 0.92
SFSWAP-204ENST00000535399 KRT20P35900 424 aa20.82■□□□□ 0.92
SFSWAP-204ENST00000535399 DGKQP52824 942 aa20.82■□□□□ 0.92
SFSWAP-204ENST00000535399 PNLIPRP2P54317 469 aa20.82■□□□□ 0.92
SFSWAP-204ENST00000535399 SRSF1Q07955 248 aaKnown RBP eCLIP20.82■□□□□ 0.925e-8■■■□□ 18.4
SFSWAP-204ENST00000535399 EFR3AQ14156 821 aa20.82■□□□□ 0.92
SFSWAP-204ENST00000535399 LASP1Q14847 261 aaKnown RBP20.82■□□□□ 0.92
SFSWAP-204ENST00000535399 SPDYE7PQ495Y7 208 aa20.82■□□□□ 0.92
SFSWAP-204ENST00000535399 VPS26BQ4G0F5 336 aa20.82■□□□□ 0.92
SFSWAP-204ENST00000535399 CLEC18BQ6UXF7 455 aa20.82■□□□□ 0.92
SFSWAP-204ENST00000535399 ANKRD46Q86W74 232 aa20.82■□□□□ 0.92
SFSWAP-204ENST00000535399 CHERPQ8IWX8 916 aaKnown RBP20.82■□□□□ 0.92
SFSWAP-204ENST00000535399 CLEC18CQ8NCF0 446 aa20.82■□□□□ 0.92
SFSWAP-204ENST00000535399 SLC16A11Q8NCK7 471 aa20.82■□□□□ 0.92
SFSWAP-204ENST00000535399 OR56A1Q8NGH5 318 aa20.82■□□□□ 0.92
SFSWAP-204ENST00000535399 FBXO30Q8TB52 745 aa20.82■□□□□ 0.92
SFSWAP-204ENST00000535399 PRR7Q8TB68 274 aa20.82■□□□□ 0.92
SFSWAP-204ENST00000535399 PIK3R3Q92569 461 aa20.82■□□□□ 0.92
SFSWAP-204ENST00000535399 SLC9A6Q92581 669 aa20.82■□□□□ 0.92
SFSWAP-204ENST00000535399 EFHD2Q96C19 240 aaPredicted RBP20.82■□□□□ 0.92
SFSWAP-204ENST00000535399 ZBTB18Q99592 522 aa20.82■□□□□ 0.92
SFSWAP-204ENST00000535399 YIPF4Q9BSR8 244 aa20.82■□□□□ 0.92
SFSWAP-204ENST00000535399 GPATCH2Q9NW75 528 aa20.82■□□□□ 0.92
SFSWAP-204ENST00000535399 FAM120CQ9NX05 1096 aaKnown RBP20.82■□□□□ 0.92
SFSWAP-204ENST00000535399 ZIM2Q9NZV7 527 aa20.82■□□□□ 0.92
SFSWAP-204ENST00000535399 PRAMEF25A6NGN4 478 aa20.81■□□□□ 0.92
SFSWAP-204ENST00000535399 SLC22A3O75751 556 aa20.81■□□□□ 0.92
SFSWAP-204ENST00000535399 IL33O95760 270 aa20.81■□□□□ 0.92
SFSWAP-204ENST00000535399 HMGN2P05204 90 aaKnown RBP20.81■□□□□ 0.92
SFSWAP-204ENST00000535399 ZFP36L2P47974 494 aaKnown RBP20.81■□□□□ 0.92
SFSWAP-204ENST00000535399 PRIM2P49643 509 aa20.81■□□□□ 0.92
SFSWAP-204ENST00000535399 HSF1Q00613 529 aa20.81■□□□□ 0.92
SFSWAP-204ENST00000535399 DUSP5Q16690 384 aa20.81■□□□□ 0.92
SFSWAP-204ENST00000535399 DECR1Q16698 335 aa20.81■□□□□ 0.92
SFSWAP-204ENST00000535399 FNDC7Q5VTL7 733 aa20.81■□□□□ 0.92
SFSWAP-204ENST00000535399 GHDCQ8N2G8 530 aa20.81■□□□□ 0.92
SFSWAP-204ENST00000535399 FAM109AQ8N4B1 249 aa20.81■□□□□ 0.92
SFSWAP-204ENST00000535399 GLB1L3Q8NCI6 653 aaPredicted RBP20.81■□□□□ 0.92
SFSWAP-204ENST00000535399 VPS37AQ8NEZ2 397 aa20.81■□□□□ 0.92
SFSWAP-204ENST00000535399 OR4A15Q8NGL6 344 aa20.81■□□□□ 0.92
SFSWAP-204ENST00000535399 OR5AK3PQ8NH89 298 aa20.81■□□□□ 0.92
SFSWAP-204ENST00000535399 GPR151Q8TDV0 419 aa20.81■□□□□ 0.92
SFSWAP-204ENST00000535399 STON2Q8WXE9 905 aa20.81■□□□□ 0.92
SFSWAP-204ENST00000535399 MOAP1Q96BY2 351 aa20.81■□□□□ 0.92
SFSWAP-204ENST00000535399 TMCO6Q96DC7 493 aa20.81■□□□□ 0.92
SFSWAP-204ENST00000535399 THOC1Q96FV9 657 aaKnown RBP20.81■□□□□ 0.92
SFSWAP-204ENST00000535399 OTUB1Q96FW1 271 aaPredicted RBP20.81■□□□□ 0.92
SFSWAP-204ENST00000535399 ZNF597Q96LX8 424 aa20.81■□□□□ 0.92
SFSWAP-204ENST00000535399 PLSCR2Q9NRY7 297 aa20.81■□□□□ 0.92
SFSWAP-204ENST00000535399 BTNL2Q9UIR0 455 aa20.81■□□□□ 0.92
SFSWAP-204ENST00000535399 OSGIN2Q9Y236 505 aa20.81■□□□□ 0.92
SFSWAP-204ENST00000535399 BAHCC1Q9P281 2608 aa20.81■□□□□ 0.92
SFSWAP-204ENST00000535399 IGKV1D-16P01601 117 aa20.8■□□□□ 0.92
SFSWAP-204ENST00000535399 PGRP06401 933 aa20.8■□□□□ 0.92
SFSWAP-204ENST00000535399 RFPL3SP0C7P2 107 aa20.8■□□□□ 0.92
SFSWAP-204ENST00000535399 CYP4B1P13584 511 aa20.8■□□□□ 0.92
SFSWAP-204ENST00000535399 SOAT1P35610 550 aa20.8■□□□□ 0.92
SFSWAP-204ENST00000535399 MAGEA5P43359 124 aa20.8■□□□□ 0.92
SFSWAP-204ENST00000535399 MRPL19P49406 292 aaKnown RBP20.8■□□□□ 0.92
SFSWAP-204ENST00000535399 MRPS22P82650 360 aaKnown RBP20.8■□□□□ 0.92
SFSWAP-204ENST00000535399 SNTA1Q13424 505 aa20.8■□□□□ 0.92
SFSWAP-204ENST00000535399 TP53BP2Q13625 1128 aa20.8■□□□□ 0.92
SFSWAP-204ENST00000535399 SLC30A6Q6NXT4 461 aa20.8■□□□□ 0.92
SFSWAP-204ENST00000535399 CDC73Q6P1J9 531 aa20.8■□□□□ 0.92
SFSWAP-204ENST00000535399 FGD2Q7Z6J4 655 aa20.8■□□□□ 0.92
SFSWAP-204ENST00000535399 RMND5BQ96G75 393 aaPredicted RBP20.8■□□□□ 0.92
SFSWAP-204ENST00000535399 TMEM41AQ96HV5 264 aa20.8■□□□□ 0.92
SFSWAP-204ENST00000535399 JSRP1Q96MG2 331 aaPredicted RBP20.8■□□□□ 0.92
SFSWAP-204ENST00000535399 CCDC115Q96NT0 180 aa20.8■□□□□ 0.92
SFSWAP-204ENST00000535399 OSBPL11Q9BXB4 747 aa20.8■□□□□ 0.92
SFSWAP-204ENST00000535399 DEFB127Q9H1M4 99 aa20.8■□□□□ 0.92
SFSWAP-204ENST00000535399 ZNF703Q9H7S9 590 aaPredicted RBP20.8■□□□□ 0.92
SFSWAP-204ENST00000535399 GALNT9Q9HCQ5 603 aa20.8■□□□□ 0.92
SFSWAP-204ENST00000535399 PCDHGB4Q9UN71 923 aa20.8■□□□□ 0.92
SFSWAP-204ENST00000535399 ICOSLGO75144 302 aa20.79■□□□□ 0.92
SFSWAP-204ENST00000535399 CPSF4O95639 269 aaKnown RBP20.79■□□□□ 0.92
SFSWAP-204ENST00000535399 STSP08842 583 aa20.79■□□□□ 0.92
SFSWAP-204ENST00000535399 ALOX5P09917 674 aa20.79■□□□□ 0.92
SFSWAP-204ENST00000535399 PAOXQ6QHF9 649 aa20.79■□□□□ 0.92
SFSWAP-204ENST00000535399 CLEC4FQ8N1N0 589 aa20.79■□□□□ 0.92
SFSWAP-204ENST00000535399 MIER2Q8N344 545 aa20.79■□□□□ 0.92
SFSWAP-204ENST00000535399 OR9I1Q8NGQ6 314 aa20.79■□□□□ 0.92
SFSWAP-204ENST00000535399 RFWD2Q8NHY2 731 aa20.79■□□□□ 0.92
SFSWAP-204ENST00000535399 FAM110BQ8TC76 370 aa20.79■□□□□ 0.92
SFSWAP-204ENST00000535399 JADE3Q92613 823 aa20.79■□□□□ 0.92
SFSWAP-204ENST00000535399 OR52E6Q96RD3 313 aa20.79■□□□□ 0.92
SFSWAP-204ENST00000535399 STACQ99469 402 aa20.79■□□□□ 0.92
SFSWAP-204ENST00000535399 ACTRT3Q9BYD9 372 aa20.79■□□□□ 0.92
SFSWAP-204ENST00000535399 DUSP22Q9NRW4 184 aa20.79■□□□□ 0.92
SFSWAP-204ENST00000535399 GIN1Q9NXP7 522 aa20.79■□□□□ 0.92
SFSWAP-204ENST00000535399 KLRF1Q9NZS2 232 aa20.79■□□□□ 0.92
SFSWAP-204ENST00000535399 FLRT3Q9NZU0 649 aa20.79■□□□□ 0.92
SFSWAP-204ENST00000535399 MRTO4Q9UKD2 239 aaKnown RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms