RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 C16orf74Q96GX8 76 aa3.48□□□□□ -1.85
PRKDC-205ENST00000535375 TEX13AQ9BXU3 409 aaPredicted RBP3.48□□□□□ -1.85
PRKDC-205ENST00000535375 OPN3Q9H1Y3 402 aaPredicted RBP3.48□□□□□ -1.85
PRKDC-205ENST00000535375 C1orf21Q9H246 121 aa3.48□□□□□ -1.85
PRKDC-205ENST00000535375 PIGVQ9NUD9 493 aa3.48□□□□□ -1.85
PRKDC-205ENST00000535375 SLC2A6Q9UGQ3 507 aa3.48□□□□□ -1.85
PRKDC-205ENST00000535375 CFAP65Q6ZU64 1925 aaKnown RBP3.48□□□□□ -1.85
PRKDC-205ENST00000535375 WI2-2373I1.2A0A1W2PRP0 233 aa3.47□□□□□ -1.85
PRKDC-205ENST00000535375 SYCE3A1L190 88 aa3.47□□□□□ -1.85
PRKDC-205ENST00000535375 KRT87PA6NCN2 255 aa3.47□□□□□ -1.85
PRKDC-205ENST00000535375 CCDC69A6NI79 296 aa3.47□□□□□ -1.85
PRKDC-205ENST00000535375 SLC4A1P02730 911 aa3.47□□□□□ -1.85
PRKDC-205ENST00000535375 AREGP15514 252 aa3.47□□□□□ -1.85
PRKDC-205ENST00000535375 CCNA2P20248 432 aa3.47□□□□□ -1.85
PRKDC-205ENST00000535375 PTMSP20962 102 aa3.47□□□□□ -1.85
PRKDC-205ENST00000535375 MAPK3P27361 379 aaPredicted RBP3.47□□□□□ -1.85
PRKDC-205ENST00000535375 MAT2AP31153 395 aaKnown RBP3.47□□□□□ -1.85
PRKDC-205ENST00000535375 ATXN3P54252 364 aaPredicted RBP3.47□□□□□ -1.85
PRKDC-205ENST00000535375 RPS8P62241 208 aaKnown RBP3.47□□□□□ -1.85
PRKDC-205ENST00000535375 NOP14P78316 857 aaKnown RBP3.47□□□□□ -1.85
PRKDC-205ENST00000535375 WASHC5Q12768 1159 aa3.47□□□□□ -1.85
PRKDC-205ENST00000535375 EIF2B1Q14232 305 aaKnown RBP3.47□□□□□ -1.85
PRKDC-205ENST00000535375 GLYR1Q49A26 553 aaPredicted RBP3.47□□□□□ -1.85
PRKDC-205ENST00000535375 MEDAGQ5VYS4 303 aa3.47□□□□□ -1.85
PRKDC-205ENST00000535375 PRR5LQ6MZQ0 368 aa3.47□□□□□ -1.85
PRKDC-205ENST00000535375 TMEM37Q8WXS4 190 aa3.47□□□□□ -1.85
PRKDC-205ENST00000535375 NMUR2Q9GZQ4 415 aa3.47□□□□□ -1.85
PRKDC-205ENST00000535375 TMEM9Q9P0T7 183 aa3.47□□□□□ -1.85
PRKDC-205ENST00000535375 DNPEPQ9ULA0 475 aa3.47□□□□□ -1.85
PRKDC-205ENST00000535375 STRAPQ9Y3F4 350 aaKnown RBP3.47□□□□□ -1.85
PRKDC-205ENST00000535375 ZNF175Q9Y473 711 aa3.47□□□□□ -1.85
PRKDC-205ENST00000535375 NOL4O94818 638 aa3.46□□□□□ -1.86
PRKDC-205ENST00000535375 HSPB1P04792 205 aaKnown RBP3.46□□□□□ -1.86
PRKDC-205ENST00000535375 CCDC166P0CW27 439 aa3.46□□□□□ -1.86
PRKDC-205ENST00000535375 MARCKSP29966 332 aaPredicted RBP3.46□□□□□ -1.86
PRKDC-205ENST00000535375 ACVR1BP36896 505 aa3.46□□□□□ -1.86
PRKDC-205ENST00000535375 RABIFP47224 123 aa3.46□□□□□ -1.86
PRKDC-205ENST00000535375 SRP54P61011 504 aaKnown RBP3.46□□□□□ -1.86
PRKDC-205ENST00000535375 GALK2Q01415 458 aa3.46□□□□□ -1.86
PRKDC-205ENST00000535375 PUDPQ08623 228 aa3.46□□□□□ -1.86
PRKDC-205ENST00000535375 PRAMEF7Q5VXH5 474 aa3.46□□□□□ -1.86
PRKDC-205ENST00000535375 MOB1BQ7L9L4 216 aa3.46□□□□□ -1.86
PRKDC-205ENST00000535375 ADAMTSL2Q86TH1 951 aa3.46□□□□□ -1.86
PRKDC-205ENST00000535375 CEND1Q8N111 149 aa3.46□□□□□ -1.86
PRKDC-205ENST00000535375 BATF2Q8N1L9 274 aa3.46□□□□□ -1.86
PRKDC-205ENST00000535375 COLGALT1Q8NBJ5 622 aa3.46□□□□□ -1.86
PRKDC-205ENST00000535375 TMEM185AQ8NFB2 350 aa3.46□□□□□ -1.86
PRKDC-205ENST00000535375 FNDC8Q8TC99 324 aa3.46□□□□□ -1.86
PRKDC-205ENST00000535375 FRAT1Q92837 279 aaPredicted RBP3.46□□□□□ -1.86
PRKDC-205ENST00000535375 TSPAN18Q96SJ8 248 aa3.46□□□□□ -1.86
PRKDC-205ENST00000535375 XPO4Q9C0E2 1151 aaKnown RBP3.46□□□□□ -1.86
PRKDC-205ENST00000535375 ISG20L2Q9H9L3 353 aaKnown RBP3.46□□□□□ -1.86
PRKDC-205ENST00000535375 HPS4Q9NQG7 708 aa3.46□□□□□ -1.86
PRKDC-205ENST00000535375 EPS15L1Q9UBC2 864 aa3.46□□□□□ -1.86
PRKDC-205ENST00000535375 COPS7AQ9UBW8 275 aa3.46□□□□□ -1.86
PRKDC-205ENST00000535375 KCNN3Q9UGI6 736 aa3.46□□□□□ -1.86
PRKDC-205ENST00000535375 CA5BQ9Y2D0 317 aa3.46□□□□□ -1.86
PRKDC-205ENST00000535375 DHRS7Q9Y394 339 aa3.46□□□□□ -1.86
PRKDC-205ENST00000535375 TRBV7-9A0A0J9YWB2 115 aa3.45□□□□□ -1.86
PRKDC-205ENST00000535375 PDLIM1O00151 329 aa3.45□□□□□ -1.86
PRKDC-205ENST00000535375 IGSF6O95976 241 aa3.45□□□□□ -1.86
PRKDC-205ENST00000535375 ZP3P21754 424 aa3.45□□□□□ -1.86
PRKDC-205ENST00000535375 SFNP31947 248 aa3.45□□□□□ -1.86
PRKDC-205ENST00000535375 OR3A4PP47883 348 aa3.45□□□□□ -1.86
PRKDC-205ENST00000535375 PITPNBP48739 271 aa3.45□□□□□ -1.86
PRKDC-205ENST00000535375 NPY2RP49146 381 aa3.45□□□□□ -1.86
PRKDC-205ENST00000535375 SLC26A2P50443 739 aa3.45□□□□□ -1.86
PRKDC-205ENST00000535375 HNRNPFP52597 415 aaKnown RBP3.45□□□□□ -1.86
PRKDC-205ENST00000535375 ZNF133P52736 654 aaPredicted RBP3.45□□□□□ -1.86
PRKDC-205ENST00000535375 DIO3P55073 304 aa3.45□□□□□ -1.86
PRKDC-205ENST00000535375 KYAT1Q16773 422 aa3.45□□□□□ -1.86
PRKDC-205ENST00000535375 CMPK2Q5EBM0 449 aa3.45□□□□□ -1.86
PRKDC-205ENST00000535375 CELF3Q5SZQ8 465 aaKnown RBP3.45□□□□□ -1.86
PRKDC-205ENST00000535375 TFAP2EQ6VUC0 442 aa3.45□□□□□ -1.86
PRKDC-205ENST00000535375 DPY19L2P2Q6ZN68 376 aa3.45□□□□□ -1.86
PRKDC-205ENST00000535375 BNIPLQ7Z465 357 aa3.45□□□□□ -1.86
PRKDC-205ENST00000535375 ADGRD2Q7Z7M1 963 aa3.45□□□□□ -1.86
PRKDC-205ENST00000535375 GPR65Q8IYL9 337 aa3.45□□□□□ -1.86
PRKDC-205ENST00000535375 NEK11Q8NG66 645 aa3.45□□□□□ -1.86
PRKDC-205ENST00000535375 OR4F17Q8NGA8 305 aa3.45□□□□□ -1.86
PRKDC-205ENST00000535375 RSPH1Q8WYR4 309 aa3.45□□□□□ -1.86
PRKDC-205ENST00000535375 P3H4Q92791 437 aa3.45□□□□□ -1.86
PRKDC-205ENST00000535375 DNAJA3Q96EY1 480 aa3.45□□□□□ -1.86
PRKDC-205ENST00000535375 IMMP1LQ96LU5 166 aa3.45□□□□□ -1.86
PRKDC-205ENST00000535375 TECTBQ96PL2 329 aa3.45□□□□□ -1.86
PRKDC-205ENST00000535375 FAM111AQ96PZ2 611 aa3.45□□□□□ -1.86
PRKDC-205ENST00000535375 OR4F4Q96R69 305 aa3.45□□□□□ -1.86
PRKDC-205ENST00000535375 C19orf24Q9BVV8 132 aa3.45□□□□□ -1.86
PRKDC-205ENST00000535375 NLNQ9BYT8 704 aa3.45□□□□□ -1.86
PRKDC-205ENST00000535375 ALG9Q9H6U8 611 aa3.45□□□□□ -1.86
PRKDC-205ENST00000535375 ZNF702PQ9H963 129 aa3.45□□□□□ -1.86
PRKDC-205ENST00000535375 EXOSC3Q9NQT5 275 aaKnown RBP3.45□□□□□ -1.86
PRKDC-205ENST00000535375 SPASTQ9UBP0 616 aa3.45□□□□□ -1.86
PRKDC-205ENST00000535375 BARX2Q9UMQ3 279 aaPredicted RBP3.45□□□□□ -1.86
PRKDC-205ENST00000535375 PDE10AQ9Y233 779 aa3.45□□□□□ -1.86
PRKDC-205ENST00000535375 MACROD2A1Z1Q3 448 aa3.44□□□□□ -1.86
PRKDC-205ENST00000535375 LRIT2A6NDA9 550 aa3.44□□□□□ -1.86
PRKDC-205ENST00000535375 NPIPA2E9PIF3 369 aa3.44□□□□□ -1.86
PRKDC-205ENST00000535375 NME2P1O60361 137 aa3.44□□□□□ -1.86
PRKDC-205ENST00000535375 LRP3O75074 770 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms