RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 CSF2P04141 144 aa16.29■□□□□ 0.2
PHRF1-206ENST00000534320 AK4P27144 223 aaPredicted RBP16.29■□□□□ 0.2
PHRF1-206ENST00000534320 HOXA9P31269 272 aa16.29■□□□□ 0.2
PHRF1-206ENST00000534320 MACROD1Q9BQ69 325 aa16.29■□□□□ 0.2
PHRF1-206ENST00000534320 NMNAT1Q9HAN9 279 aaPredicted RBP16.29■□□□□ 0.2
PHRF1-206ENST00000534320 NOP16Q9Y3C1 178 aaKnown RBP16.29■□□□□ 0.2
PHRF1-206ENST00000534320 SMIM30A4D0T7 59 aa16.29■□□□□ 0.2
PHRF1-206ENST00000534320 MRPL3P09001 348 aaKnown RBP16.29■□□□□ 0.2
PHRF1-206ENST00000534320 MTHFD2P13995 350 aa16.29■□□□□ 0.2
PHRF1-206ENST00000534320 NDUFV2P19404 249 aa16.29■□□□□ 0.2
PHRF1-206ENST00000534320 IL32P24001 234 aa16.29■□□□□ 0.2
PHRF1-206ENST00000534320 CNR2P34972 360 aa16.29■□□□□ 0.2
PHRF1-206ENST00000534320 MC3RP41968 323 aa16.29■□□□□ 0.2
PHRF1-206ENST00000534320 OC90Q02509 493 aaPredicted RBP16.29■□□□□ 0.2
PHRF1-206ENST00000534320 SPHARQ15513 63 aa16.29■□□□□ 0.2
PHRF1-206ENST00000534320 RNF111Q6ZNA4 994 aa16.29■□□□□ 0.2
PHRF1-206ENST00000534320 SH2D5Q6ZV89 423 aa16.29■□□□□ 0.2
PHRF1-206ENST00000534320 TRIM46Q7Z4K8 759 aa16.29■□□□□ 0.2
PHRF1-206ENST00000534320 TMEM156Q8N614 296 aa16.29■□□□□ 0.2
PHRF1-206ENST00000534320 ADAMTS18Q8TE60 1221 aa16.29■□□□□ 0.2
PHRF1-206ENST00000534320 NXPE2Q96DL1 559 aa16.29■□□□□ 0.2
PHRF1-206ENST00000534320 ENAMQ9NRM1 1142 aa16.29■□□□□ 0.2
PHRF1-206ENST00000534320 OR6C2Q9NZP2 312 aa16.29■□□□□ 0.2
PHRF1-206ENST00000534320 OSMP13725 252 aa16.29■□□□□ 0.2
PHRF1-206ENST00000534320 FBLP22087 321 aaKnown RBP16.29■□□□□ 0.2
PHRF1-206ENST00000534320 GPR4P46093 362 aa16.29■□□□□ 0.2
PHRF1-206ENST00000534320 PRSS48Q7RTY5 328 aa16.29■□□□□ 0.2
PHRF1-206ENST00000534320 CCDC54Q8NEL0 328 aa16.29■□□□□ 0.2
PHRF1-206ENST00000534320 OR9A2Q8NGT5 310 aa16.29■□□□□ 0.2
PHRF1-206ENST00000534320 MS4A4EQ96PG1 132 aa16.29■□□□□ 0.2
PHRF1-206ENST00000534320 SECISBP2Q96T21 854 aaKnown RBP16.29■□□□□ 0.2
PHRF1-206ENST00000534320 TM9SF2Q99805 663 aa16.29■□□□□ 0.2
PHRF1-206ENST00000534320 POLDIP3Q9BY77 421 aaKnown RBP16.29■□□□□ 0.2
PHRF1-206ENST00000534320 KIAA0100Q14667 2235 aaKnown RBP16.29■□□□□ 0.2
PHRF1-206ENST00000534320 PRSS38A1L453 326 aa16.29■□□□□ 0.2
PHRF1-206ENST00000534320 TAPBPO15533 448 aa16.29■□□□□ 0.2
PHRF1-206ENST00000534320 PRKCDQ05655 676 aa16.29■□□□□ 0.2
PHRF1-206ENST00000534320 CDK5R2Q13319 367 aa16.29■□□□□ 0.2
PHRF1-206ENST00000534320 LMNTD1Q8N9Z9 388 aa16.29■□□□□ 0.2
PHRF1-206ENST00000534320 OR14K1Q8NGZ2 314 aa16.29■□□□□ 0.2
PHRF1-206ENST00000534320 OR5K2Q8NHB8 316 aa16.29■□□□□ 0.2
PHRF1-206ENST00000534320 DAZLQ92904 295 aaKnown RBP16.29■□□□□ 0.2
PHRF1-206ENST00000534320 MYEOVQ96EZ4 313 aa16.29■□□□□ 0.2
PHRF1-206ENST00000534320 TTYH2Q9BSA4 534 aa16.29■□□□□ 0.2
PHRF1-206ENST00000534320 M0R3H8 397 aa16.28■□□□□ 0.2
PHRF1-206ENST00000534320 FOXE1O00358 373 aaPredicted RBP16.28■□□□□ 0.2
PHRF1-206ENST00000534320 EN2P19622 333 aaPredicted RBP16.28■□□□□ 0.2
PHRF1-206ENST00000534320 S100PP25815 95 aa16.28■□□□□ 0.2
PHRF1-206ENST00000534320 GPR143P51810 404 aa16.28■□□□□ 0.2
PHRF1-206ENST00000534320 CHERPQ8IWX8 916 aaKnown RBP16.28■□□□□ 0.2
PHRF1-206ENST00000534320 PDZD9Q8IXQ8 264 aa16.28■□□□□ 0.2
PHRF1-206ENST00000534320 OR2L8Q8NGY9 312 aa16.28■□□□□ 0.2
PHRF1-206ENST00000534320 MAGED1Q9Y5V3 778 aaPredicted RBP16.28■□□□□ 0.2
PHRF1-206ENST00000534320 COL4A5P29400 1685 aa16.28■□□□□ 0.2
PHRF1-206ENST00000534320 RGS6P49758 472 aa16.28■□□□□ 0.2
PHRF1-206ENST00000534320 UGT8Q16880 541 aa16.28■□□□□ 0.2
PHRF1-206ENST00000534320 PROX2Q3B8N5 592 aa16.28■□□□□ 0.2
PHRF1-206ENST00000534320 CCBE1Q6UXH8 406 aaPredicted RBP16.28■□□□□ 0.2
PHRF1-206ENST00000534320 TTLL10Q6ZVT0 673 aa16.28■□□□□ 0.2
PHRF1-206ENST00000534320 USP53Q70EK8 1073 aa16.28■□□□□ 0.2
PHRF1-206ENST00000534320 NKD1Q969G9 470 aa16.28■□□□□ 0.2
PHRF1-206ENST00000534320 HYLS1Q96M11 299 aa16.28■□□□□ 0.2
PHRF1-206ENST00000534320 SLA2Q9H6Q3 261 aa16.28■□□□□ 0.2
PHRF1-206ENST00000534320 TIGARQ9NQ88 270 aa16.28■□□□□ 0.2
PHRF1-206ENST00000534320 AP1M2Q9Y6Q5 423 aa16.28■□□□□ 0.2
PHRF1-206ENST00000534320 SLC33A1O00400 549 aaPredicted RBP16.28■□□□□ 0.2
PHRF1-206ENST00000534320 HK3P52790 923 aa16.28■□□□□ 0.2
PHRF1-206ENST00000534320 HNRNPA0Q13151 305 aaKnown RBP16.28■□□□□ 0.2
PHRF1-206ENST00000534320 KEAP1Q14145 624 aa16.28■□□□□ 0.2
PHRF1-206ENST00000534320 CBLL1Q75N03 491 aa16.28■□□□□ 0.2
PHRF1-206ENST00000534320 FUNDC1Q8IVP5 155 aa16.28■□□□□ 0.2
PHRF1-206ENST00000534320 CPPED1Q9BRF8 314 aaPredicted RBP16.28■□□□□ 0.2
PHRF1-206ENST00000534320 BIN3Q9NQY0 253 aa16.28■□□□□ 0.2
PHRF1-206ENST00000534320 ANTXRLA6NF34 631 aa16.28■□□□□ 0.2
PHRF1-206ENST00000534320 FAM155AB1AL88 458 aaPredicted RBP16.28■□□□□ 0.2
PHRF1-206ENST00000534320 IFNA2P01563 188 aa16.28■□□□□ 0.2
PHRF1-206ENST00000534320 GADD45AP24522 165 aa16.28■□□□□ 0.2
PHRF1-206ENST00000534320 SSTP61278 116 aa16.28■□□□□ 0.2
PHRF1-206ENST00000534320 TRA2BP62995 288 aaKnown RBP16.28■□□□□ 0.2
PHRF1-206ENST00000534320 PIN1Q13526 163 aaPredicted RBP16.28■□□□□ 0.2
PHRF1-206ENST00000534320 GRM7Q14831 915 aa16.28■□□□□ 0.2
PHRF1-206ENST00000534320 TMEM164Q5U3C3 297 aa16.28■□□□□ 0.2
PHRF1-206ENST00000534320 TMIGD2Q96BF3 282 aa16.28■□□□□ 0.2
PHRF1-206ENST00000534320 LHPPQ9H008 270 aa16.28■□□□□ 0.2
PHRF1-206ENST00000534320 TUBB1Q9H4B7 451 aa16.28■□□□□ 0.2
PHRF1-206ENST00000534320 USP22Q9UPT9 525 aa16.28■□□□□ 0.2
PHRF1-206ENST00000534320 I6L893 689 aaPredicted RBP16.27■□□□□ 0.2
PHRF1-206ENST00000534320 PROS1P07225 676 aa16.27■□□□□ 0.2
PHRF1-206ENST00000534320 CTGFP29279 349 aa16.27■□□□□ 0.2
PHRF1-206ENST00000534320 IRS1P35568 1242 aa16.27■□□□□ 0.2
PHRF1-206ENST00000534320 LIMS2Q7Z4I7 341 aa16.27■□□□□ 0.2
PHRF1-206ENST00000534320 ZSCAN1Q8NBB4 408 aa16.27■□□□□ 0.2
PHRF1-206ENST00000534320 FAM46AQ96IP4 442 aaKnown RBP16.27■□□□□ 0.2
PHRF1-206ENST00000534320 TTTY10Q9BZA0 68 aa16.27■□□□□ 0.2
PHRF1-206ENST00000534320 GMPR2Q9P2T1 348 aaKnown RBP16.27■□□□□ 0.2
PHRF1-206ENST00000534320 TBX21Q9UL17 535 aa16.27■□□□□ 0.2
PHRF1-206ENST00000534320 TAF1LQ8IZX4 1826 aa16.27■□□□□ 0.2
PHRF1-206ENST00000534320 KIAA0355O15063 1070 aa16.27■□□□□ 0.2
PHRF1-206ENST00000534320 SSX4O60224 188 aa16.27■□□□□ 0.2
PHRF1-206ENST00000534320 HMGN2P05204 90 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms