RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 DCST1Q5T197 706 aa12.81□□□□□ -0.36
SF3B2-215ENST00000534307 TMEM107Q6UX40 140 aa12.81□□□□□ -0.36
SF3B2-215ENST00000534307 MEX3BQ6ZN04 569 aaKnown RBP12.81□□□□□ -0.36
SF3B2-215ENST00000534307 MREGQ8N565 214 aa12.81□□□□□ -0.36
SF3B2-215ENST00000534307 FAM83FQ8NEG4 500 aaPredicted RBP12.81□□□□□ -0.36
SF3B2-215ENST00000534307 OR4N2Q8NGD1 307 aa12.81□□□□□ -0.36
SF3B2-215ENST00000534307 OR6Y1Q8NGX8 325 aa12.81□□□□□ -0.36
SF3B2-215ENST00000534307 TMCO6Q96DC7 493 aa12.81□□□□□ -0.36
SF3B2-215ENST00000534307 ADOQ96SZ5 270 aa12.81□□□□□ -0.36
SF3B2-215ENST00000534307 CCT7Q99832 543 aa12.81□□□□□ -0.36
SF3B2-215ENST00000534307 UGT2B28Q9BY64 529 aa12.81□□□□□ -0.36
SF3B2-215ENST00000534307 IQCGQ9H095 443 aaKnown RBP12.81□□□□□ -0.36
SF3B2-215ENST00000534307 KCNJ16Q9NPI9 418 aa12.81□□□□□ -0.36
SF3B2-215ENST00000534307 TAS2R9Q9NYW1 312 aa12.81□□□□□ -0.36
SF3B2-215ENST00000534307 KLRF1Q9NZS2 232 aa12.81□□□□□ -0.36
SF3B2-215ENST00000534307 SLC6A5Q9Y345 797 aa12.81□□□□□ -0.36
SF3B2-215ENST00000534307 MED12Q93074 2177 aa12.81□□□□□ -0.36
SF3B2-215ENST00000534307 KIAA1549Q9HCM3 1950 aa12.81□□□□□ -0.36
SF3B2-215ENST00000534307 AHRRA9YTQ3 701 aa12.8□□□□□ -0.36
SF3B2-215ENST00000534307 FAM47E-STBD1D6RA91 191 aa12.8□□□□□ -0.36
SF3B2-215ENST00000534307 RGS14O43566 566 aa12.8□□□□□ -0.36
SF3B2-215ENST00000534307 TYROBPO43914 113 aa12.8□□□□□ -0.36
SF3B2-215ENST00000534307 TBX19O60806 448 aa12.8□□□□□ -0.36
SF3B2-215ENST00000534307 COQ9O75208 318 aa12.8□□□□□ -0.36
SF3B2-215ENST00000534307 SPAG7O75391 227 aa12.8□□□□□ -0.36
SF3B2-215ENST00000534307 REM1O75628 298 aa12.8□□□□□ -0.36
SF3B2-215ENST00000534307 EPPINO95925 133 aa12.8□□□□□ -0.36
SF3B2-215ENST00000534307 LINC00032P0C843 101 aa12.8□□□□□ -0.36
SF3B2-215ENST00000534307 BMP7P18075 431 aa12.8□□□□□ -0.36
SF3B2-215ENST00000534307 SSTR2P30874 369 aa12.8□□□□□ -0.36
SF3B2-215ENST00000534307 NTSP30990 170 aa12.8□□□□□ -0.36
SF3B2-215ENST00000534307 ZFP36L2P47974 494 aaKnown RBP12.8□□□□□ -0.36
SF3B2-215ENST00000534307 PNLIPRP2P54317 469 aa12.8□□□□□ -0.36
SF3B2-215ENST00000534307 KRTAP10-9P60411 292 aa12.8□□□□□ -0.36
SF3B2-215ENST00000534307 IFFO1Q0D2I5 559 aa12.8□□□□□ -0.36
SF3B2-215ENST00000534307 PDE7AQ13946 482 aa12.8□□□□□ -0.36
SF3B2-215ENST00000534307 EFR3AQ14156 821 aa12.8□□□□□ -0.36
SF3B2-215ENST00000534307 RFTN2Q52LD8 501 aaPredicted RBP12.8□□□□□ -0.36
SF3B2-215ENST00000534307 WIPI1Q5MNZ9 446 aaPredicted RBP12.8□□□□□ -0.36
SF3B2-215ENST00000534307 LARP4Q71RC2 724 aaKnown RBP eCLIP12.8□□□□□ -0.36
SF3B2-215ENST00000534307 SLC44A2Q8IWA5 706 aaPredicted RBP12.8□□□□□ -0.36
SF3B2-215ENST00000534307 DMRTC2Q8IXT2 367 aaPredicted RBP12.8□□□□□ -0.36
SF3B2-215ENST00000534307 OR10Q1Q8NGQ4 319 aa12.8□□□□□ -0.36
SF3B2-215ENST00000534307 TCP10LQ8TDR4 215 aa12.8□□□□□ -0.36
SF3B2-215ENST00000534307 HOXB13Q92826 284 aaPredicted RBP12.8□□□□□ -0.36
SF3B2-215ENST00000534307 ELP4Q96EB1 424 aa12.8□□□□□ -0.36
SF3B2-215ENST00000534307 OR2B2Q9GZK3 357 aa12.8□□□□□ -0.36
SF3B2-215ENST00000534307 SERHLQ9NQF3 203 aa12.8□□□□□ -0.36
SF3B2-215ENST00000534307 ALKBH4Q9NXW9 302 aa12.8□□□□□ -0.36
SF3B2-215ENST00000534307 SENP1Q9P0U3 644 aa12.8□□□□□ -0.36
SF3B2-215ENST00000534307 MAPRE3Q9UPY8 281 aa12.8□□□□□ -0.36
SF3B2-215ENST00000534307 WIF1Q9Y5W5 379 aa12.8□□□□□ -0.36
SF3B2-215ENST00000534307 CBR3O75828 277 aa12.79□□□□□ -0.36
SF3B2-215ENST00000534307 CEACAM8P31997 349 aaPredicted RBP12.79□□□□□ -0.36
SF3B2-215ENST00000534307 FRKP42685 505 aaPredicted RBP12.79□□□□□ -0.36
SF3B2-215ENST00000534307 ETV4P43268 484 aa12.79□□□□□ -0.36
SF3B2-215ENST00000534307 GFRA1P56159 465 aa12.79□□□□□ -0.36
SF3B2-215ENST00000534307 ZNF155Q12901 538 aaPredicted RBP12.79□□□□□ -0.36
SF3B2-215ENST00000534307 ZNF385BQ569K4 471 aa12.79□□□□□ -0.36
SF3B2-215ENST00000534307 XKR7Q5GH72 579 aa12.79□□□□□ -0.36
SF3B2-215ENST00000534307 ANKRD26P1Q6NSI1 321 aa12.79□□□□□ -0.36
SF3B2-215ENST00000534307 POMZP3Q6PJE2 187 aa12.79□□□□□ -0.36
SF3B2-215ENST00000534307 YRDCQ86U90 279 aaKnown RBP12.79□□□□□ -0.36
SF3B2-215ENST00000534307 PLCZ1Q86YW0 608 aa12.79□□□□□ -0.36
SF3B2-215ENST00000534307 HOMEZQ8IX15 550 aa12.79□□□□□ -0.36
SF3B2-215ENST00000534307 PM20D2Q8IYS1 436 aa12.79□□□□□ -0.36
SF3B2-215ENST00000534307 NAXEQ8NCW5 288 aa12.79□□□□□ -0.36
SF3B2-215ENST00000534307 TWIST2Q8WVJ9 160 aa12.79□□□□□ -0.36
SF3B2-215ENST00000534307 EFHD2Q96C19 240 aaPredicted RBP12.79□□□□□ -0.36
SF3B2-215ENST00000534307 WDYHV1Q96HA8 205 aa12.79□□□□□ -0.36
SF3B2-215ENST00000534307 LMF2Q9BU23 707 aaKnown RBP12.79□□□□□ -0.36
SF3B2-215ENST00000534307 DDX18Q9NVP1 670 aaKnown RBP12.79□□□□□ -0.36
SF3B2-215ENST00000534307 FBXL2Q9UKC9 423 aa12.79□□□□□ -0.36
SF3B2-215ENST00000534307 TMED5Q9Y3A6 229 aa12.79□□□□□ -0.36
SF3B2-215ENST00000534307 FIS1Q9Y3D6 152 aa12.79□□□□□ -0.36
SF3B2-215ENST00000534307 TRAF6Q9Y4K3 522 aa12.79□□□□□ -0.36
SF3B2-215ENST00000534307 FLNAP21333 2647 aaKnown RBP12.78□□□□□ -0.36
SF3B2-215ENST00000534307 C17orf51A8MQB3 221 aa12.78□□□□□ -0.36
SF3B2-215ENST00000534307 PIP5K1BO14986 540 aa12.78□□□□□ -0.36
SF3B2-215ENST00000534307 PDPK1O15530 556 aa12.78□□□□□ -0.36
SF3B2-215ENST00000534307 CHEK2O96017 543 aa12.78□□□□□ -0.36
SF3B2-215ENST00000534307 ACTL6AO96019 429 aa12.78□□□□□ -0.36
SF3B2-215ENST00000534307 BCKDHAP12694 445 aa12.78□□□□□ -0.36
SF3B2-215ENST00000534307 CYP4B1P13584 511 aa12.78□□□□□ -0.36
SF3B2-215ENST00000534307 IL12BP29460 328 aa12.78□□□□□ -0.36
SF3B2-215ENST00000534307 TIMP3P35625 211 aa12.78□□□□□ -0.36
SF3B2-215ENST00000534307 SERPINB5P36952 375 aa12.78□□□□□ -0.36
SF3B2-215ENST00000534307 MAP3K8P41279 467 aa12.78□□□□□ -0.36
SF3B2-215ENST00000534307 WNT3P56703 355 aa12.78□□□□□ -0.36
SF3B2-215ENST00000534307 RPL38P63173 70 aaKnown RBP12.78□□□□□ -0.36
SF3B2-215ENST00000534307 ZNF844Q08AG5 666 aa12.78□□□□□ -0.36
SF3B2-215ENST00000534307 TOMM20Q15388 145 aa12.78□□□□□ -0.36
SF3B2-215ENST00000534307 SLC25A35Q3KQZ1 300 aa12.78□□□□□ -0.36
SF3B2-215ENST00000534307 CYP27C1Q4G0S4 372 aa12.78□□□□□ -0.36
SF3B2-215ENST00000534307 CES4AQ5XG92 561 aa12.78□□□□□ -0.36
SF3B2-215ENST00000534307 NSUN5P2Q63ZY6 315 aa12.78□□□□□ -0.36
SF3B2-215ENST00000534307 ZCCHC23Q6ZST2 131 aa12.78□□□□□ -0.36
SF3B2-215ENST00000534307 ZNF551Q7Z340 670 aaPredicted RBP12.78□□□□□ -0.36
SF3B2-215ENST00000534307 LACC1Q8IV20 430 aa12.78□□□□□ -0.36
SF3B2-215ENST00000534307 CLYBLQ8N0X4 340 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms