RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 DEFB127Q9H1M4 99 aa9□□□□□ -0.97
NUP98-220ENST00000533346 TSPAN10Q9H1Z9 355 aaPredicted RBP9□□□□□ -0.97
NUP98-220ENST00000533346 AKTIPQ9H8T0 292 aa9□□□□□ -0.97
NUP98-220ENST00000533346 ANKRA2Q9H9E1 313 aa9□□□□□ -0.97
NUP98-220ENST00000533346 HHATLQ9HCP6 504 aa9□□□□□ -0.97
NUP98-220ENST00000533346 SIRT3Q9NTG7 399 aaPredicted RBP9□□□□□ -0.97
NUP98-220ENST00000533346 DDX18Q9NVP1 670 aaKnown RBP9□□□□□ -0.97
NUP98-220ENST00000533346 SH3BP4Q9P0V3 963 aa9□□□□□ -0.97
NUP98-220ENST00000533346 MRTO4Q9UKD2 239 aaKnown RBP9□□□□□ -0.97
NUP98-220ENST00000533346 CBLCQ9ULV8 474 aa9□□□□□ -0.97
NUP98-220ENST00000533346 ABCG2Q9UNQ0 655 aa9□□□□□ -0.97
NUP98-220ENST00000533346 C15orf41Q9Y2V0 281 aa9□□□□□ -0.97
NUP98-220ENST00000533346 HRH3Q9Y5N1 445 aa9□□□□□ -0.97
NUP98-220ENST00000533346 MYO9AB2RTY4 2548 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 PCNX3Q9H6A9 2034 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 TRGV5A0A0B4J1U4 118 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 A0A1W2PRB8 838 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 G3V3Y1 287 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 HDAC3O15379 428 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 EMC8O43402 210 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 FADS1O60427 444 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 ZG16O60844 167 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 SCN2BO60939 215 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 WDR1O75083 606 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 SKAP2O75563 359 aaPredicted RBP8.99□□□□□ -0.97
NUP98-220ENST00000533346 REM1O75628 298 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 NGFRP08138 427 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 LAMP1P11279 417 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 G6PDP11413 515 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 GABRA1P14867 456 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 LBPP18428 481 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 ENDOUP21128 410 aaKnown RBP8.99□□□□□ -0.97
NUP98-220ENST00000533346 PTGER4P35408 488 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 RFC3P40938 356 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 MAN2A2P49641 1150 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 CDK9P50750 372 aaKnown RBP8.99□□□□□ -0.97
NUP98-220ENST00000533346 SMSP52788 366 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 PSMD4P55036 377 aaKnown RBP8.99□□□□□ -0.97
NUP98-220ENST00000533346 DIO3P55073 304 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 CORO7P57737 925 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 GAB1Q13480 694 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 ZNHIT3Q15649 155 aaPredicted RBP8.99□□□□□ -0.97
NUP98-220ENST00000533346 DPY19L1Q2PZI1 675 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 LSM12Q3MHD2 195 aaKnown RBP8.99□□□□□ -0.97
NUP98-220ENST00000533346 VPS26BQ4G0F5 336 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 CPTPQ5TA50 214 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 HDXQ7Z353 690 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 MRGPRGQ86SM5 289 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 SLC44A2Q8IWA5 706 aaPredicted RBP8.99□□□□□ -0.97
NUP98-220ENST00000533346 PRR22Q8IZ63 422 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 WDSUB1Q8N9V3 476 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 ACBD4Q8NC06 268 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 NUP43Q8NFH3 380 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 OR1J4Q8NGS1 313 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 CDC26Q8NHZ8 85 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 AGR3Q8TD06 166 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 GFM2Q969S9 779 aaKnown RBP8.99□□□□□ -0.97
NUP98-220ENST00000533346 CIDECQ96AQ7 238 aaPredicted RBP8.99□□□□□ -0.97
NUP98-220ENST00000533346 ATP6V1G3Q96LB4 118 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 STACQ99469 402 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 OSBPL11Q9BXB4 747 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 OR2B2Q9GZK3 357 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 PRDM14Q9GZV8 571 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 MANSC1Q9H8J5 431 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 NEUROD4Q9HD90 331 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 Q9N2J8 555 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 ARGLU1Q9NWB6 273 aaPredicted RBP8.99□□□□□ -0.97
NUP98-220ENST00000533346 NKIRAS1Q9NYS0 192 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 GIMAP2Q9UG22 337 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 TINAGQ9UJW2 476 aa8.99□□□□□ -0.97
NUP98-220ENST00000533346 IGLV3-32A0A0A0MS00 114 aa8.98□□□□□ -0.97
NUP98-220ENST00000533346 PRAMEF25A6NGN4 478 aa8.98□□□□□ -0.97
NUP98-220ENST00000533346 TRPC5OSA6NMA1 111 aa8.98□□□□□ -0.97
NUP98-220ENST00000533346 FAM166BA8MTA8 275 aa8.98□□□□□ -0.97
NUP98-220ENST00000533346 AHRRA9YTQ3 701 aa8.98□□□□□ -0.97
NUP98-220ENST00000533346 RNASET2O00584 256 aaKnown RBP8.98□□□□□ -0.97
NUP98-220ENST00000533346 SDHDO14521 159 aa8.98□□□□□ -0.97
NUP98-220ENST00000533346 ZNF195O14628 629 aa8.98□□□□□ -0.97
NUP98-220ENST00000533346 AKAP10O43572 662 aa8.98□□□□□ -0.97
NUP98-220ENST00000533346 LRATO95237 230 aa8.98□□□□□ -0.97
NUP98-220ENST00000533346 ACTL6AO96019 429 aa8.98□□□□□ -0.97
NUP98-220ENST00000533346 GUSBP08236 651 aa8.98□□□□□ -0.97
NUP98-220ENST00000533346 CELA3AP09093 270 aa8.98□□□□□ -0.97
NUP98-220ENST00000533346 ESRRAP11474 423 aaPredicted RBP8.98□□□□□ -0.97
NUP98-220ENST00000533346 GPC1P35052 558 aa8.98□□□□□ -0.97
NUP98-220ENST00000533346 KRT20P35900 424 aa8.98□□□□□ -0.97
NUP98-220ENST00000533346 PRIM2P49643 509 aa8.98□□□□□ -0.97
NUP98-220ENST00000533346 WNT3P56703 355 aa8.98□□□□□ -0.97
NUP98-220ENST00000533346 PRR5P85299 388 aa8.98□□□□□ -0.97
NUP98-220ENST00000533346 CRYZQ08257 329 aaKnown RBP8.98□□□□□ -0.97
NUP98-220ENST00000533346 PDCD2Q16342 344 aaPredicted RBP8.98□□□□□ -0.97
NUP98-220ENST00000533346 DECR1Q16698 335 aa8.98□□□□□ -0.97
NUP98-220ENST00000533346 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.98□□□□□ -0.97
NUP98-220ENST00000533346 BICRALQ6AI39 1079 aa8.98□□□□□ -0.97
NUP98-220ENST00000533346 VASNQ6EMK4 673 aa8.98□□□□□ -0.97
NUP98-220ENST00000533346 ANKRD26P1Q6NSI1 321 aa8.98□□□□□ -0.97
NUP98-220ENST00000533346 MFSD12Q6NUT3 480 aa8.98□□□□□ -0.97
NUP98-220ENST00000533346 ACAD11Q709F0 780 aa8.98□□□□□ -0.97
NUP98-220ENST00000533346 SPATA19Q7Z5L4 167 aa8.98□□□□□ -0.97
NUP98-220ENST00000533346 CD163Q86VB7 1156 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms