RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 C10orf82Q8WW14 230 aa15.25■□□□□ 0.03
PKP3-209ENST00000533069 NTNG2Q96CW9 530 aa15.25■□□□□ 0.03
PKP3-209ENST00000533069 SLC35A4Q96G79 324 aa15.25■□□□□ 0.03
PKP3-209ENST00000533069 PPP3R2Q96LZ3 170 aa15.25■□□□□ 0.03
PKP3-209ENST00000533069 NUF2Q9BZD4 464 aa15.25■□□□□ 0.03
PKP3-209ENST00000533069 RUBCNLQ9H714 662 aa15.25■□□□□ 0.03
PKP3-209ENST00000533069 FOLH1BQ9HBA9 442 aa15.25■□□□□ 0.03
PKP3-209ENST00000533069 TCF7L2Q9NQB0 619 aa15.25■□□□□ 0.03
PKP3-209ENST00000533069 PNPLA3Q9NST1 481 aa15.25■□□□□ 0.03
PKP3-209ENST00000533069 DCTN4Q9UJW0 460 aa15.25■□□□□ 0.03
PKP3-209ENST00000533069 ACAD8Q9UKU7 415 aa15.25■□□□□ 0.03
PKP3-209ENST00000533069 EXO1Q9UQ84 846 aaKnown RBP15.25■□□□□ 0.03
PKP3-209ENST00000533069 C15orf41Q9Y2V0 281 aa15.25■□□□□ 0.03
PKP3-209ENST00000533069 PCDHGB3Q9Y5G1 929 aa15.25■□□□□ 0.03
PKP3-209ENST00000533069 HRH3Q9Y5N1 445 aa15.25■□□□□ 0.03
PKP3-209ENST00000533069 NBPF19A0A087WUL8 3843 aa15.25■□□□□ 0.03
PKP3-209ENST00000533069 TMEM233B4DJY2 109 aa15.24■□□□□ 0.03
PKP3-209ENST00000533069 PIP5K1BO14986 540 aa15.24■□□□□ 0.03
PKP3-209ENST00000533069 TBX19O60806 448 aa15.24■□□□□ 0.03
PKP3-209ENST00000533069 CCDC22O60826 627 aa15.24■□□□□ 0.03
PKP3-209ENST00000533069 DIAPH2O60879 1101 aa15.24■□□□□ 0.03
PKP3-209ENST00000533069 WDR1O75083 606 aa15.24■□□□□ 0.03
PKP3-209ENST00000533069 SKAP2O75563 359 aaPredicted RBP15.24■□□□□ 0.03
PKP3-209ENST00000533069 DCTN3O75935 186 aa15.24■□□□□ 0.03
PKP3-209ENST00000533069 JUNP05412 331 aaKnown RBP15.24■□□□□ 0.03
PKP3-209ENST00000533069 CT45A8P0DMV1 189 aa15.24■□□□□ 0.03
PKP3-209ENST00000533069 CT45A9P0DMV2 189 aa15.24■□□□□ 0.03
PKP3-209ENST00000533069 SDC1P18827 310 aa15.24■□□□□ 0.03
PKP3-209ENST00000533069 TACR1P25103 407 aa15.24■□□□□ 0.03
PKP3-209ENST00000533069 ACVR2AP27037 513 aa15.24■□□□□ 0.03
PKP3-209ENST00000533069 KRT20P35900 424 aa15.24■□□□□ 0.03
PKP3-209ENST00000533069 MC3RP41968 323 aa15.24■□□□□ 0.03
PKP3-209ENST00000533069 ASMTP46597 345 aa15.24■□□□□ 0.03
PKP3-209ENST00000533069 CT45A2Q5DJT8 189 aa15.24■□□□□ 0.03
PKP3-209ENST00000533069 NCCRP1Q6ZVX7 275 aaPredicted RBP15.24■□□□□ 0.03
PKP3-209ENST00000533069 MARVELD2Q8N4S9 558 aa15.24■□□□□ 0.03
PKP3-209ENST00000533069 NEIL3Q8TAT5 605 aa15.24■□□□□ 0.03
PKP3-209ENST00000533069 ASB5Q8WWX0 329 aa15.24■□□□□ 0.03
PKP3-209ENST00000533069 TMCO6Q96DC7 493 aa15.24■□□□□ 0.03
PKP3-209ENST00000533069 AMDHD1Q96NU7 426 aa15.24■□□□□ 0.03
PKP3-209ENST00000533069 COL21A1Q96P44 957 aa15.24■□□□□ 0.03
PKP3-209ENST00000533069 OSBPL11Q9BXB4 747 aa15.24■□□□□ 0.03
PKP3-209ENST00000533069 TMEM120AQ9BXJ8 343 aa15.24■□□□□ 0.03
PKP3-209ENST00000533069 UBQLN3Q9H347 655 aa15.24■□□□□ 0.03
PKP3-209ENST00000533069 GLIPR2Q9H4G4 154 aa15.24■□□□□ 0.03
PKP3-209ENST00000533069 ANKRA2Q9H9E1 313 aa15.24■□□□□ 0.03
PKP3-209ENST00000533069 DDX18Q9NVP1 670 aaKnown RBP15.24■□□□□ 0.03
PKP3-209ENST00000533069 C19orf53Q9UNZ5 99 aaPredicted RBP15.24■□□□□ 0.03
PKP3-209ENST00000533069 NAV2Q8IVL1 2488 aa15.23■□□□□ 0.03
PKP3-209ENST00000533069 PRAMEF25A6NGN4 478 aa15.23■□□□□ 0.03
PKP3-209ENST00000533069 PDPK1O15530 556 aa15.23■□□□□ 0.03
PKP3-209ENST00000533069 RRP9O43818 475 aaKnown RBP15.23■□□□□ 0.03
PKP3-209ENST00000533069 UGT2B11O75310 529 aa15.23■□□□□ 0.03
PKP3-209ENST00000533069 HPNP05981 417 aa15.23■□□□□ 0.03
PKP3-209ENST00000533069 HOXD4P09016 255 aaPredicted RBP15.23■□□□□ 0.03
PKP3-209ENST00000533069 DDX5P17844 614 aaKnown RBP15.23■□□□□ 0.03
PKP3-209ENST00000533069 ENDOUP21128 410 aaKnown RBP15.23■□□□□ 0.03
PKP3-209ENST00000533069 MAPK1P28482 360 aa15.23■□□□□ 0.03
PKP3-209ENST00000533069 IDH3AP50213 366 aa15.23■□□□□ 0.03
PKP3-209ENST00000533069 CORO7P57737 925 aa15.23■□□□□ 0.03
PKP3-209ENST00000533069 MRPS22P82650 360 aaKnown RBP15.23■□□□□ 0.03
PKP3-209ENST00000533069 ZNF155Q12901 538 aaPredicted RBP15.23■□□□□ 0.03
PKP3-209ENST00000533069 EFR3AQ14156 821 aa15.23■□□□□ 0.03
PKP3-209ENST00000533069 PRSS53Q2L4Q9 553 aa15.23■□□□□ 0.03
PKP3-209ENST00000533069 ATP6AP1LQ52LC2 224 aa15.23■□□□□ 0.03
PKP3-209ENST00000533069 RFTN2Q52LD8 501 aaPredicted RBP15.23■□□□□ 0.03
PKP3-209ENST00000533069 FNDC7Q5VTL7 733 aa15.23■□□□□ 0.03
PKP3-209ENST00000533069 TIGD3Q6B0B8 471 aa15.23■□□□□ 0.03
PKP3-209ENST00000533069 OGFOD2Q6N063 350 aa15.23■□□□□ 0.03
PKP3-209ENST00000533069 TMEM107Q6UX40 140 aa15.23■□□□□ 0.03
PKP3-209ENST00000533069 OR2L13Q8N349 312 aa15.23■□□□□ 0.03
PKP3-209ENST00000533069 OR5M9Q8NGP3 310 aa15.23■□□□□ 0.03
PKP3-209ENST00000533069 RFWD2Q8NHY2 731 aa15.23■□□□□ 0.03
PKP3-209ENST00000533069 CA5BP1Q8WTZ4 195 aa15.23■□□□□ 0.03
PKP3-209ENST00000533069 RND1Q92730 232 aa15.23■□□□□ 0.03
PKP3-209ENST00000533069 TMBIM1Q969X1 311 aa15.23■□□□□ 0.03
PKP3-209ENST00000533069 MARVELD3Q96A59 401 aa15.23■□□□□ 0.03
PKP3-209ENST00000533069 SDCCAG3Q96C92 435 aa15.23■□□□□ 0.03
PKP3-209ENST00000533069 PPCDCQ96CD2 204 aa15.23■□□□□ 0.03
PKP3-209ENST00000533069 TUBGCP3Q96CW5 907 aa15.23■□□□□ 0.03
PKP3-209ENST00000533069 EGLN2Q96KS0 407 aa15.23■□□□□ 0.03
PKP3-209ENST00000533069 NODALQ96S42 347 aa15.23■□□□□ 0.03
PKP3-209ENST00000533069 SLC6A15Q9H2J7 730 aa15.23■□□□□ 0.03
PKP3-209ENST00000533069 REEP4Q9H6H4 257 aa15.23■□□□□ 0.03
PKP3-209ENST00000533069 KLRF1Q9NZS2 232 aa15.23■□□□□ 0.03
PKP3-209ENST00000533069 SPRR3Q9UBC9 169 aa15.23■□□□□ 0.03
PKP3-209ENST00000533069 CENPEQ02224 2701 aa15.23■□□□□ 0.03
PKP3-209ENST00000533069 TTC36A6NLP5 189 aa15.22■□□□□ 0.03
PKP3-209ENST00000533069 SDHDO14521 159 aa15.22■□□□□ 0.03
PKP3-209ENST00000533069 ICOSLGO75144 302 aa15.22■□□□□ 0.03
PKP3-209ENST00000533069 REM1O75628 298 aa15.22■□□□□ 0.03
PKP3-209ENST00000533069 TRAPPC6AO75865 159 aa15.22■□□□□ 0.03
PKP3-209ENST00000533069 PSMG1O95456 288 aa15.22■□□□□ 0.03
PKP3-209ENST00000533069 GABRA1P14867 456 aa15.22■□□□□ 0.03
PKP3-209ENST00000533069 LBPP18428 481 aa15.22■□□□□ 0.03
PKP3-209ENST00000533069 GRNP28799 593 aaKnown RBP15.22■□□□□ 0.03
PKP3-209ENST00000533069 IL12BP29460 328 aa15.22■□□□□ 0.03
PKP3-209ENST00000533069 CHRNB4P30926 498 aa15.22■□□□□ 0.03
PKP3-209ENST00000533069 PTGER4P35408 488 aa15.22■□□□□ 0.03
PKP3-209ENST00000533069 CDK9P50750 372 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms