RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 OR2T1O43869 369 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 LAMP1P11279 417 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 IVDP26440 423 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 RBPJQ06330 500 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 SLC14A2Q15849 920 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 NADK2Q4G0N4 442 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 EEF1A1P5Q5VTE0 462 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 RFLNAQ6ZTI6 216 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 TIMM29Q9BSF4 260 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 POTEKPQ9BYX7 375 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 FXYD6Q9H0Q3 95 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 LHX3Q9UBR4 397 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 RPH3AQ9Y2J0 694 aaPredicted RBP14□□□□□ -0.17
PCDHA9-202ENST00000532602 SIT1Q9Y3P8 196 aa14□□□□□ -0.17
PCDHA9-202ENST00000532602 SOBPA7XYQ1 873 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 HTRA2O43464 458 aaPredicted RBP13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 ADAP00813 363 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 GKN3PP0CG01 181 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 TUBB3Q13509 450 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 DCDC5Q6ZRR9 648 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 CNIH3Q8TBE1 160 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 AKAP1Q92667 903 aaKnown RBP eCLIP13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 IL20RAQ9UHF4 553 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 MCTS1Q9ULC4 181 aaKnown RBP13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 PTRH2Q9Y3E5 179 aaKnown RBP13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 ADAM18Q9Y3Q7 739 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 BLACEA4D250 179 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 E2F3O00716 465 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 PNMTP11086 282 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 SYCE2Q6PIF2 218 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 MS4A15Q8N5U1 240 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 SPPL3Q8TCT6 385 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 RFT1Q96AA3 541 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 HDHD5Q9BXW7 423 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 RAB9BQ9NP90 201 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 JRKO75564 520 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 CKMT1AP12532 417 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 POU3F4P49335 361 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 ZNF140P52738 457 aaPredicted RBP13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 TPTEP56180 551 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 SHFQ7M4L6 423 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 WACQ9BTA9 647 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 TMEM45AQ9NWC5 275 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 ICKQ9UPZ9 632 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 STRCP1A6NGW2 1772 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 NPIPA5A0A0B4J1W7 369 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 NPIPA7E9PJI5 369 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 PENKP01210 267 aaPredicted RBP13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 NPIPA8P0DM63 369 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 ITGB8P26012 769 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 FCRLBQ6BAA4 426 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 ABHD12BQ7Z5M8 362 aaPredicted RBP13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 MSANTD3Q96H12 275 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 TMEM68Q96MH6 324 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 PARPBPQ9NWS1 579 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 C17orf105B2RV13 164 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 G3V2L1 256 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 NKX3-2P78367 333 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 CTSL3PQ5NE16 218 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 ARSKQ6UWY0 536 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 PPP1R35Q8TAP8 253 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 ZNF675Q8TD23 568 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 NXPE3Q969Y0 559 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 TMEM185BQ9H7F4 350 aa13.99□□□□□ -0.17
PCDHA9-202ENST00000532602 LAMB1P07942 1786 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 CCR7P32248 378 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 PRPS1P60891 318 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 NKAIN2Q5VXU1 208 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 KCTD9Q7L273 389 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 SPAG16Q8N0X2 631 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 DNTTIP1Q9H147 329 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 PAK1IP1Q9NWT1 392 aaPredicted RBP13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 TRBV2A0A0J9YWF9 115 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 ATG12O94817 140 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 UBL4AP11441 157 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 TGFBR3Q03167 851 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 VWA5B2Q8N398 1253 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 SAMD12Q8N8I0 201 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 CASTOR1Q8WTX7 329 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 ZNF442Q9H7R0 627 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 RDH14Q9HBH5 336 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 GSKIPQ9P0R6 139 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 ZNF175Q9Y473 711 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 BMP1P13497 986 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 TLE3Q04726 772 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 CEACAM19Q7Z692 300 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 TMPRSS12Q86WS5 348 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 OR7G3Q8NG95 312 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 MFSD8Q8NHS3 518 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 CHFRQ96EP1 664 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 MYO9BQ13459 2157 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 PRDX3P30048 256 aaKnown RBP13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 PBX2P40425 430 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 MAGEA12P43365 314 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 MAB21L1Q13394 359 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 RUNDC3AQ59EK9 446 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 MFSD6LQ8IWD5 586 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 CREB3L1Q96BA8 519 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 MYRFLQ96LU7 910 aa13.98□□□□□ -0.17
PCDHA9-202ENST00000532602 DMRTB1Q96MA1 342 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms