RNA–Protein interactions for RNA: ENST00000531550.1

SCN4B-205, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 1,206 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-205ENST00000531550 ACOT4Q8N9L9 421 aa16.48■□□□□ 0.23
SCN4B-205ENST00000531550 C7orf57Q8NEG2 295 aa16.48■□□□□ 0.23
SCN4B-205ENST00000531550 CEP70Q8NHQ1 597 aa16.48■□□□□ 0.23
SCN4B-205ENST00000531550 HUS1BQ8NHY5 278 aa16.48■□□□□ 0.23
SCN4B-205ENST00000531550 FBXL20Q96IG2 436 aa16.48■□□□□ 0.23
SCN4B-205ENST00000531550 ART5Q96L15 291 aa16.48■□□□□ 0.23
SCN4B-205ENST00000531550 C3orf30Q96M34 536 aa16.48■□□□□ 0.23
SCN4B-205ENST00000531550 GAL3ST4Q96RP7 486 aa16.48■□□□□ 0.23
SCN4B-205ENST00000531550 EBF4Q9BQW3 602 aa16.48■□□□□ 0.23
SCN4B-205ENST00000531550 CAMK2AQ9UQM7 478 aa16.48■□□□□ 0.23
SCN4B-205ENST00000531550 MBD3L4A6NDZ8 208 aaPredicted RBP16.47■□□□□ 0.23
SCN4B-205ENST00000531550 MBD3L3A6NE82 208 aaPredicted RBP16.47■□□□□ 0.23
SCN4B-205ENST00000531550 MBD3L5A6NJ08 208 aaPredicted RBP16.47■□□□□ 0.23
SCN4B-205ENST00000531550 CD8B2A6NJW9 211 aa16.47■□□□□ 0.23
SCN4B-205ENST00000531550 RTCAO00442 366 aaKnown RBP16.47■□□□□ 0.23
SCN4B-205ENST00000531550 ARHGEF9O43307 516 aa16.47■□□□□ 0.23
SCN4B-205ENST00000531550 DYRK3O43781 588 aa16.47■□□□□ 0.23
SCN4B-205ENST00000531550 PCNAP12004 261 aa16.47■□□□□ 0.23
SCN4B-205ENST00000531550 CPN2P22792 545 aa16.47■□□□□ 0.23
SCN4B-205ENST00000531550 PCSK6P29122 969 aa16.47■□□□□ 0.23
SCN4B-205ENST00000531550 EPHA3P29320 983 aa16.47■□□□□ 0.23
SCN4B-205ENST00000531550 OPRM1P35372 400 aa16.47■□□□□ 0.23
SCN4B-205ENST00000531550 SF3B4Q15427 424 aaKnown RBP eCLIP16.47■□□□□ 0.23
SCN4B-205ENST00000531550 NTRK2Q16620 822 aa16.47■□□□□ 0.23
SCN4B-205ENST00000531550 SMU1Q2TAY7 513 aa16.47■□□□□ 0.23
SCN4B-205ENST00000531550 SGO1Q5FBB7 561 aa16.47■□□□□ 0.23
SCN4B-205ENST00000531550 METTL21CQ5VZV1 264 aa16.47■□□□□ 0.23
SCN4B-205ENST00000531550 CCDC197Q8NCU1 140 aa16.47■□□□□ 0.23
SCN4B-205ENST00000531550 SRFBP1Q8NEF9 429 aaKnown RBP16.47■□□□□ 0.23
SCN4B-205ENST00000531550 MBD3L2Q8NHZ7 208 aaPredicted RBP16.47■□□□□ 0.23
SCN4B-205ENST00000531550 PPWD1Q96BP3 646 aaKnown RBP16.47■□□□□ 0.23
SCN4B-205ENST00000531550 METTL2AQ96IZ6 378 aaKnown RBP16.47■□□□□ 0.23
SCN4B-205ENST00000531550 TRIB1Q96RU8 372 aa16.47■□□□□ 0.23
SCN4B-205ENST00000531550 TBCDQ9BTW9 1192 aa16.47■□□□□ 0.23
SCN4B-205ENST00000531550 MS4A8Q9BY19 250 aa16.47■□□□□ 0.23
SCN4B-205ENST00000531550 WDR55Q9H6Y2 383 aaPredicted RBP16.47■□□□□ 0.23
SCN4B-205ENST00000531550 TCF7L2Q9NQB0 619 aa16.47■□□□□ 0.23
SCN4B-205ENST00000531550 NMRK1Q9NWW6 199 aa16.47■□□□□ 0.23
SCN4B-205ENST00000531550 SLC6A5Q9Y345 797 aa16.47■□□□□ 0.23
SCN4B-205ENST00000531550 PTGDR2Q9Y5Y4 395 aa16.47■□□□□ 0.23
SCN4B-205ENST00000531550 TRAPPC6AO75865 159 aa16.46■□□□□ 0.23
SCN4B-205ENST00000531550 SCELO95171 688 aa16.46■□□□□ 0.23
SCN4B-205ENST00000531550 IL18BPO95998 194 aa16.46■□□□□ 0.23
SCN4B-205ENST00000531550 HPNP05981 417 aa16.46■□□□□ 0.23
SCN4B-205ENST00000531550 HIST1H1TP22492 207 aaPredicted RBP16.46■□□□□ 0.23
SCN4B-205ENST00000531550 PTX3P26022 381 aaPredicted RBP16.46■□□□□ 0.23
SCN4B-205ENST00000531550 PLIN5Q00G26 463 aa16.46■□□□□ 0.23
SCN4B-205ENST00000531550 SF3A3Q12874 501 aaKnown RBP eCLIP16.46■□□□□ 0.23
SCN4B-205ENST00000531550 IMPG1Q17R60 797 aa16.46■□□□□ 0.23
SCN4B-205ENST00000531550 LSM12Q3MHD2 195 aaKnown RBP16.46■□□□□ 0.23
SCN4B-205ENST00000531550 TBCELQ5QJ74 424 aa16.46■□□□□ 0.23
SCN4B-205ENST00000531550 VASNQ6EMK4 673 aa16.46■□□□□ 0.23
SCN4B-205ENST00000531550 SLC29A4Q7RTT9 530 aa16.46■□□□□ 0.23
SCN4B-205ENST00000531550 CIARTQ8N365 385 aaPredicted RBP16.46■□□□□ 0.23
SCN4B-205ENST00000531550 OR2T11Q8NH01 316 aa16.46■□□□□ 0.23
SCN4B-205ENST00000531550 DOK4Q8TEW6 326 aa16.46■□□□□ 0.23
SCN4B-205ENST00000531550 DIO2Q92813 273 aa16.46■□□□□ 0.23
SCN4B-205ENST00000531550 PPP1R36Q96LQ0 422 aa16.46■□□□□ 0.23
SCN4B-205ENST00000531550 PPP3R2Q96LZ3 170 aa16.46■□□□□ 0.23
SCN4B-205ENST00000531550 RILPQ96NA2 401 aa16.46■□□□□ 0.23
SCN4B-205ENST00000531550 DACH2Q96NX9 599 aa16.46■□□□□ 0.23
SCN4B-205ENST00000531550 OR52B2Q96RD2 323 aa16.46■□□□□ 0.23
SCN4B-205ENST00000531550 MTERF1Q99551 399 aaKnown RBP16.46■□□□□ 0.23
SCN4B-205ENST00000531550 SERPINI1Q99574 410 aa16.46■□□□□ 0.23
SCN4B-205ENST00000531550 REPIN1Q9BWE0 567 aaKnown RBP16.46■□□□□ 0.23
SCN4B-205ENST00000531550 ACPTQ9BZG2 426 aa16.46■□□□□ 0.23
SCN4B-205ENST00000531550 WWTR1Q9GZV5 400 aa16.46■□□□□ 0.23
SCN4B-205ENST00000531550 UBQLN3Q9H347 655 aa16.46■□□□□ 0.23
SCN4B-205ENST00000531550 AKTIPQ9H8T0 292 aa16.46■□□□□ 0.23
SCN4B-205ENST00000531550 RYDENQ9NUL5 291 aaKnown RBP16.46■□□□□ 0.23
SCN4B-205ENST00000531550 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.46■□□□□ 0.23
SCN4B-205ENST00000531550 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.46■□□□□ 0.23
SCN4B-205ENST00000531550 FREM3P0C091 2139 aa16.46■□□□□ 0.23
SCN4B-205ENST00000531550 GOLGA8QA0A0J9YX86 632 aa16.45■□□□□ 0.22
SCN4B-205ENST00000531550 GOLGA8OA6NCC3 632 aa16.45■□□□□ 0.22
SCN4B-205ENST00000531550 ANKRD33BA6NCL7 494 aa16.45■□□□□ 0.22
SCN4B-205ENST00000531550 GOLGA8NF8WBI6 632 aa16.45■□□□□ 0.22
SCN4B-205ENST00000531550 H7C1Q1 480 aa16.45■□□□□ 0.22
SCN4B-205ENST00000531550 LSM1O15116 133 aaKnown RBP16.45■□□□□ 0.22
SCN4B-205ENST00000531550 RSL1D1O76021 490 aaKnown RBP16.45■□□□□ 0.22
SCN4B-205ENST00000531550 LBPP18428 481 aa16.45■□□□□ 0.22
SCN4B-205ENST00000531550 CDK9P50750 372 aaKnown RBP16.45■□□□□ 0.22
SCN4B-205ENST00000531550 RPS13P62277 151 aaKnown RBP16.45■□□□□ 0.22
SCN4B-205ENST00000531550 ERVK-8P63133 956 aa16.45■□□□□ 0.22
SCN4B-205ENST00000531550 CUL3Q13618 768 aa16.45■□□□□ 0.22
SCN4B-205ENST00000531550 DDX39BQ13838 428 aaKnown RBP16.45■□□□□ 0.22
SCN4B-205ENST00000531550 EBPQ15125 230 aaKnown RBP16.45■□□□□ 0.22
SCN4B-205ENST00000531550 NHSL2Q5HYW2 709 aa16.45■□□□□ 0.22
SCN4B-205ENST00000531550 DCST1Q5T197 706 aa16.45■□□□□ 0.22
SCN4B-205ENST00000531550 BICRALQ6AI39 1079 aa16.45■□□□□ 0.22
SCN4B-205ENST00000531550 OGFOD2Q6N063 350 aa16.45■□□□□ 0.22
SCN4B-205ENST00000531550 P3H2Q8IVL5 708 aa16.45■□□□□ 0.22
SCN4B-205ENST00000531550 C9orf106Q8NAJ2 232 aa16.45■□□□□ 0.22
SCN4B-205ENST00000531550 SMPDL3BQ92485 455 aa16.45■□□□□ 0.22
SCN4B-205ENST00000531550 TUBGCP3Q96CW5 907 aa16.45■□□□□ 0.22
SCN4B-205ENST00000531550 CMTM7Q96FZ5 175 aa16.45■□□□□ 0.22
SCN4B-205ENST00000531550 RBM18Q96H35 190 aaKnown RBP16.45■□□□□ 0.22
SCN4B-205ENST00000531550 WDYHV1Q96HA8 205 aa16.45■□□□□ 0.22
SCN4B-205ENST00000531550 HBEGFQ99075 208 aa16.45■□□□□ 0.22
SCN4B-205ENST00000531550 RBM24Q9BX46 236 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms