RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 SHEQ5VZ18 495 aa8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 TIGD3Q6B0B8 471 aa8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 GRHL2Q6ISB3 625 aa8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 MED27Q6P2C8 311 aa8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 C22orf34Q6ZV56 151 aa8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 SLC29A4Q7RTT9 530 aa8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 LRRC70Q7Z2Q7 622 aa8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 YRDCQ86U90 279 aaKnown RBP8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 PM20D2Q8IYS1 436 aa8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 GCNT2Q8N0V5 402 aa8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 TEX9Q8N6V9 391 aa8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 SRFBP1Q8NEF9 429 aaKnown RBP8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 FAM83FQ8NEG4 500 aaPredicted RBP8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 OR6Y1Q8NGX8 325 aa8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 UBTD2Q8WUN7 234 aa8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 SMPDL3BQ92485 455 aa8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 TANKQ92844 425 aa8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 RIT1Q92963 219 aa8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 EXT2Q93063 718 aa8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 HGDQ93099 445 aa8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 CTHRC1Q96CG8 243 aa8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 LRRC46Q96FV0 321 aa8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 CMTM7Q96FZ5 175 aa8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 TMEM41AQ96HV5 264 aa8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 ART5Q96L15 291 aa8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 DACH2Q96NX9 599 aa8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 ATOH8Q96SQ7 321 aa8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 MYCBPQ99417 103 aaPredicted RBP8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 MTERF1Q99551 399 aaKnown RBP8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 GPR22Q99680 433 aa8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 YIPF4Q9BSR8 244 aa8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 CCDC106Q9BWC9 280 aa8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 RBM24Q9BX46 236 aaKnown RBP8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 NXF5Q9H1B4 397 aaKnown RBP8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 CALHM2Q9HA72 323 aa8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 CXorf21Q9HAI6 301 aa8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 SNX15Q9NRS6 342 aa8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 CD274Q9NZQ7 290 aa8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 C6orf203Q9P0P8 240 aaPredicted RBP8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 STOML1Q9UBI4 398 aa8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 TESMINQ9Y4I5 508 aa8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 NPFFR2Q9Y5X5 522 aa8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 SPACA6W5XKT8 324 aa8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 FREM1Q5H8C1 2179 aa8.36□□□□□ -1.07
CHMP4A-205ENST00000531158 LRRC14BA6NHZ5 514 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 OR6C76A6NM76 312 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 C17orf51A8MQB3 221 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 VGLL3A8MV65 326 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 UBXN8O00124 270 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 PGRMC2O15173 223 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 SNUPNO95149 360 aaKnown RBP8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 SNX4O95219 450 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 GOSR1O95249 250 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 GBAP04062 536 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 ABCB1P08183 1280 aaPredicted RBP8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 SLC35E2BP0CK96 405 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 SLC35E2P0CK97 266 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 MTHFD2P13995 350 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 CPN1P15169 458 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 GPX3P22352 226 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 ABCD3P28288 659 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 LOXP28300 417 aaPredicted RBP8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 TYK2P29597 1187 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 PRDX6P30041 224 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 CCKARP32238 428 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 GALNSP34059 522 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 SLC1A6P48664 564 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 AQP5P55064 265 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 GFRA1P56159 465 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 RPS13P62277 151 aaKnown RBP8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 KRTAP1-1Q07627 177 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 MGAT2Q10469 447 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 ILF2Q12905 390 aaKnown RBP8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 NNATQ16517 81 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 TRMT5Q32P41 509 aaKnown RBP8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 C6orf163Q5TEZ5 329 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 FAM219BQ5XKK7 198 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 CMC1Q7Z7K0 106 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 ISCA2Q86U28 154 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 WDSUB1Q8N9V3 476 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 ZPLD1Q8TCW7 415 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 IGFBPL1Q8WX77 278 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 ABTB1Q969K4 478 aaPredicted RBP8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 TP53INP1Q96A56 240 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 RGMAQ96B86 450 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 INTS12Q96CB8 462 aaKnown RBP8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 MARK4Q96L34 752 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 Q96MF0 132 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 HS3ST6Q96QI5 342 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 NODALQ96S42 347 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 SECISBP2Q96T21 854 aaKnown RBP8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 DENND2DQ9H6A0 471 aaPredicted RBP8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 ALG9Q9H6U8 611 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 DDX31Q9H8H2 851 aaKnown RBP8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 GALNT9Q9HCQ5 603 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 MS4A12Q9NXJ0 267 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 TAS2R1Q9NYW7 299 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 CLCF1Q9UBD9 225 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 PHF11Q9UIL8 331 aa8.35□□□□□ -1.07
CHMP4A-205ENST00000531158 TSC22D4Q9Y3Q8 395 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms