RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 CTAGE8P0CG41 777 aa16.98■□□□□ 0.31
SSRP1-204ENST00000529002 MTHFD2P13995 350 aa16.98■□□□□ 0.31
SSRP1-204ENST00000529002 DSCR4P56555 118 aaPredicted RBP16.98■□□□□ 0.31
SSRP1-204ENST00000529002 PHEXP78562 749 aa16.98■□□□□ 0.31
SSRP1-204ENST00000529002 STX5Q13190 355 aa16.98■□□□□ 0.31
SSRP1-204ENST00000529002 MORF4L2Q15014 288 aa16.98■□□□□ 0.31
SSRP1-204ENST00000529002 LIPJQ5W064 366 aa16.98■□□□□ 0.31
SSRP1-204ENST00000529002 NPSR1Q6W5P4 371 aa16.98■□□□□ 0.31
SSRP1-204ENST00000529002 LARP4Q71RC2 724 aaKnown RBP eCLIP16.98■□□□□ 0.31
SSRP1-204ENST00000529002 CMC1Q7Z7K0 106 aa16.98■□□□□ 0.31
SSRP1-204ENST00000529002 CTAGE4Q8IX94 777 aa16.98■□□□□ 0.31
SSRP1-204ENST00000529002 ARIH2OSQ8N7S6 290 aa16.98■□□□□ 0.31
SSRP1-204ENST00000529002 OR4N2Q8NGD1 307 aa16.98■□□□□ 0.31
SSRP1-204ENST00000529002 STAG3L4Q8TBR4 150 aa16.98■□□□□ 0.31
SSRP1-204ENST00000529002 FBXW5Q969U6 566 aa16.98■□□□□ 0.31
SSRP1-204ENST00000529002 LRRC39Q96DD0 335 aa16.98■□□□□ 0.31
SSRP1-204ENST00000529002 CDK15Q96Q40 435 aa16.98■□□□□ 0.31
SSRP1-204ENST00000529002 GPR22Q99680 433 aa16.98■□□□□ 0.31
SSRP1-204ENST00000529002 MRPL1Q9BYD6 325 aaKnown RBP16.98■□□□□ 0.31
SSRP1-204ENST00000529002 RTN4RQ9BZR6 473 aa16.98■□□□□ 0.31
SSRP1-204ENST00000529002 FLRT3Q9NZU0 649 aa16.98■□□□□ 0.31
SSRP1-204ENST00000529002 PPP4R1LQ9P1A2 415 aa16.98■□□□□ 0.31
SSRP1-204ENST00000529002 RNF115Q9Y4L5 304 aa16.98■□□□□ 0.31
SSRP1-204ENST00000529002 PCDHA9Q9Y5H5 950 aa16.98■□□□□ 0.31
SSRP1-204ENST00000529002 UQCRHLA0A096LP55 91 aa16.97■□□□□ 0.31
SSRP1-204ENST00000529002 ATP1B1P05026 303 aa16.97■□□□□ 0.31
SSRP1-204ENST00000529002 CT45A8P0DMV1 189 aa16.97■□□□□ 0.31
SSRP1-204ENST00000529002 CT45A9P0DMV2 189 aa16.97■□□□□ 0.31
SSRP1-204ENST00000529002 ARL4CP56559 192 aa16.97■□□□□ 0.31
SSRP1-204ENST00000529002 FGFBP1Q14512 234 aa16.97■□□□□ 0.31
SSRP1-204ENST00000529002 SLMAPQ14BN4 828 aa16.97■□□□□ 0.31
SSRP1-204ENST00000529002 ZKSCAN8Q15776 578 aaPredicted RBP16.97■□□□□ 0.31
SSRP1-204ENST00000529002 PGGHGQ32M88 737 aa16.97■□□□□ 0.31
SSRP1-204ENST00000529002 CT45A2Q5DJT8 189 aa16.97■□□□□ 0.31
SSRP1-204ENST00000529002 ADAM5Q6NVV9 412 aa16.97■□□□□ 0.31
SSRP1-204ENST00000529002 SLC48A1Q6P1K1 146 aa16.97■□□□□ 0.31
SSRP1-204ENST00000529002 ZNF619Q8N2I2 560 aa16.97■□□□□ 0.31
SSRP1-204ENST00000529002 FADS6Q8N9I5 356 aa16.97■□□□□ 0.31
SSRP1-204ENST00000529002 KBTBD8Q8NFY9 601 aa16.97■□□□□ 0.31
SSRP1-204ENST00000529002 RNF138Q8WVD3 245 aa16.97■□□□□ 0.31
SSRP1-204ENST00000529002 KCNK17Q96T54 332 aa16.97■□□□□ 0.31
SSRP1-204ENST00000529002 RBBP8Q99708 897 aa16.97■□□□□ 0.31
SSRP1-204ENST00000529002 BEX2Q9BXY8 128 aa16.97■□□□□ 0.31
SSRP1-204ENST00000529002 FOLH1BQ9HBA9 442 aa16.97■□□□□ 0.31
SSRP1-204ENST00000529002 NSMCE4AQ9NXX6 385 aa16.97■□□□□ 0.31
SSRP1-204ENST00000529002 CDC42EP3Q9UKI2 254 aa16.97■□□□□ 0.31
SSRP1-204ENST00000529002 PLCE1Q9P212 2302 aa16.96■□□□□ 0.31
SSRP1-204ENST00000529002 A0A1W2PP18 115 aa16.96■□□□□ 0.31
SSRP1-204ENST00000529002 TP73O15350 636 aa16.96■□□□□ 0.31
SSRP1-204ENST00000529002 SSX4O60224 188 aa16.96■□□□□ 0.31
SSRP1-204ENST00000529002 KERAO60938 352 aa16.96■□□□□ 0.31
SSRP1-204ENST00000529002 NTN1O95631 604 aa16.96■□□□□ 0.31
SSRP1-204ENST00000529002 CD8AP01732 235 aa16.96■□□□□ 0.31
SSRP1-204ENST00000529002 SSTR1P30872 391 aa16.96■□□□□ 0.31
SSRP1-204ENST00000529002 DEKP35659 375 aaKnown RBP16.96■□□□□ 0.31
SSRP1-204ENST00000529002 EEFSECP57772 596 aaKnown RBP16.96■□□□□ 0.31
SSRP1-204ENST00000529002 RAB10P61026 200 aa16.96■□□□□ 0.31
SSRP1-204ENST00000529002 SGCBQ16585 318 aa16.96■□□□□ 0.31
SSRP1-204ENST00000529002 TMEM249Q2WGJ8 235 aa16.96■□□□□ 0.31
SSRP1-204ENST00000529002 CCNYL2Q5T2Q4 361 aa16.96■□□□□ 0.31
SSRP1-204ENST00000529002 OR6K3Q8NGY3 331 aa16.96■□□□□ 0.31
SSRP1-204ENST00000529002 S100PBPQ96BU1 408 aa16.96■□□□□ 0.31
SSRP1-204ENST00000529002 KLHL29Q96CT2 875 aa16.96■□□□□ 0.31
SSRP1-204ENST00000529002 CNRIP1Q96F85 164 aaPredicted RBP16.96■□□□□ 0.31
SSRP1-204ENST00000529002 PRODH2Q9UF12 536 aa16.96■□□□□ 0.31
SSRP1-204ENST00000529002 GOLGA6L10A0A0M3HER8 536 aa16.95■□□□□ 0.3
SSRP1-204ENST00000529002 GOLGA6L10A6NI86 522 aa16.95■□□□□ 0.3
SSRP1-204ENST00000529002 GMFGO60234 142 aa16.95■□□□□ 0.3
SSRP1-204ENST00000529002 OPN1LWP04000 364 aa16.95■□□□□ 0.3
SSRP1-204ENST00000529002 CSNK2A2P19784 350 aaPredicted RBP16.95■□□□□ 0.3
SSRP1-204ENST00000529002 IL12BP29460 328 aa16.95■□□□□ 0.3
SSRP1-204ENST00000529002 NCMAPQ5T1S8 102 aa16.95■□□□□ 0.3
SSRP1-204ENST00000529002 IL17RELQ6ZVW7 336 aa16.95■□□□□ 0.3
SSRP1-204ENST00000529002 GOLGA7Q7Z5G4 137 aa16.95■□□□□ 0.3
SSRP1-204ENST00000529002 MILR1Q7Z6M3 343 aa16.95■□□□□ 0.3
SSRP1-204ENST00000529002 GAS2L3Q86XJ1 694 aa16.95■□□□□ 0.3
SSRP1-204ENST00000529002 METTL25Q8N6Q8 603 aa16.95■□□□□ 0.3
SSRP1-204ENST00000529002 ACTRT1Q8TDG2 376 aa16.95■□□□□ 0.3
SSRP1-204ENST00000529002 KAT2AQ92830 837 aa16.95■□□□□ 0.3
SSRP1-204ENST00000529002 NXNL1Q96CM4 212 aa16.95■□□□□ 0.3
SSRP1-204ENST00000529002 HS6ST2Q96MM7 605 aa16.95■□□□□ 0.3
SSRP1-204ENST00000529002 OSBPL9Q96SU4 736 aa16.95■□□□□ 0.3
SSRP1-204ENST00000529002 SERPINI1Q99574 410 aa16.95■□□□□ 0.3
SSRP1-204ENST00000529002 PRRG4Q9BZD6 226 aa16.95■□□□□ 0.3
SSRP1-204ENST00000529002 AMBRA1Q9C0C7 1298 aa16.95■□□□□ 0.3
SSRP1-204ENST00000529002 STMN4Q9H169 189 aaPredicted RBP16.95■□□□□ 0.3
SSRP1-204ENST00000529002 C12orf49Q9H741 205 aa16.95■□□□□ 0.3
SSRP1-204ENST00000529002 IPPKQ9H8X2 491 aa16.95■□□□□ 0.3
SSRP1-204ENST00000529002 EMC9Q9Y3B6 208 aa16.95■□□□□ 0.3
SSRP1-204ENST00000529002 DYSFO75923 2080 aa16.95■□□□□ 0.3
SSRP1-204ENST00000529002 SVEP1Q4LDE5 3571 aa16.94■□□□□ 0.3
SSRP1-204ENST00000529002 FAM234BA2RU67 622 aa16.94■□□□□ 0.3
SSRP1-204ENST00000529002 FOXE1O00358 373 aaPredicted RBP16.94■□□□□ 0.3
SSRP1-204ENST00000529002 SEMA3DO95025 777 aa16.94■□□□□ 0.3
SSRP1-204ENST00000529002 SIX3O95343 332 aaPredicted RBP16.94■□□□□ 0.3
SSRP1-204ENST00000529002 PLGP00747 810 aaPredicted RBP16.94■□□□□ 0.3
SSRP1-204ENST00000529002 CD3EP07766 207 aa16.94■□□□□ 0.3
SSRP1-204ENST00000529002 CDC25BP30305 580 aa16.94■□□□□ 0.3
SSRP1-204ENST00000529002 EIF1AXP47813 144 aaKnown RBP16.94■□□□□ 0.3
SSRP1-204ENST00000529002 MAPK12P53778 367 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms