RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 UAP1L1Q3KQV9 507 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 PAGE3Q5JUK9 113 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 NADSYN1Q6IA69 706 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 C12orf40Q86WS4 652 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 GPR26Q8NDV2 337 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 CORO2AQ92828 525 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 FKBP10Q96AY3 582 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 IL17FQ96PD4 163 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 B3GNT4Q9C0J1 378 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 PITHD1Q9GZP4 211 aaPredicted RBP6.85□□□□□ -1.31
CTNND1-218ENST00000528232 PRODH2Q9UF12 536 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 GPR45Q9Y5Y3 372 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 RNASET2O00584 256 aaKnown RBP6.85□□□□□ -1.31
CTNND1-218ENST00000528232 BPNT1O95861 308 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 ADAP00813 363 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 AGXTP21549 392 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 MAP2K4P45985 399 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 DSC1Q08554 894 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.85□□□□□ -1.317e-7■■□□□ 12.2
CTNND1-218ENST00000528232 FAM214AQ32MH5 1076 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 ARL9Q6T311 187 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 ZNF676Q8N7Q3 588 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 PNLDC1Q8NA58 520 aaKnown RBP6.85□□□□□ -1.31
CTNND1-218ENST00000528232 CHDHQ8NE62 594 aaPredicted RBP6.85□□□□□ -1.31
CTNND1-218ENST00000528232 OR5T1Q8NG75 326 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 OR56A3Q8NH54 315 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 MZB1Q8WU39 189 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 NRG4Q8WWG1 115 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 CNOT9Q92600 299 aaKnown RBP6.85□□□□□ -1.31
CTNND1-218ENST00000528232 TMEM203Q969S6 136 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 UTP4Q969X6 686 aaKnown RBP6.85□□□□□ -1.31
CTNND1-218ENST00000528232 SLC25A36Q96CQ1 311 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 CHFRQ96EP1 664 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 CLSTN3Q9BQT9 956 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 MRI1Q9BV20 369 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.85□□□□□ -1.315e-10■□□□□ 9.3
CTNND1-218ENST00000528232 ERVMER34-1Q9H9K5 563 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 SDHAF3Q9NRP4 125 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 NDRG3Q9UGV2 375 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 DNMT3AQ9Y6K1 912 aaPredicted RBP6.85□□□□□ -1.31
CTNND1-218ENST00000528232 SSC5DA1L4H1 1573 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 CDK5RAP2Q96SN8 1893 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 FEZF1A0PJY2 475 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 SOBPA7XYQ1 873 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 NPIPA7E9PJI5 369 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 SLC1A7O00341 560 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 CH25HO95992 272 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 NPIPA8P0DM63 369 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 OPRL1P41146 370 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 SEMA3BQ13214 749 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 RGNQ15493 299 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 CYP27C1Q4G0S4 372 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 FAM69AQ5T7M9 428 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 ARHGAP40Q5TG30 622 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 SLC27A4Q6P1M0 643 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 PRSS48Q7RTY5 328 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 COMMD6Q7Z4G1 85 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 PIANPQ8IYJ0 282 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 YIPF7Q8N8F6 280 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 FCAMRQ8WWV6 532 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 MALSU1Q96EH3 234 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 POTEKPQ9BYX7 375 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 SOX17Q9H6I2 414 aaPredicted RBP6.85□□□□□ -1.31
CTNND1-218ENST00000528232 SACM1LQ9NTJ5 587 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 HRASLS2Q9NWW9 162 aa6.85□□□□□ -1.31
CTNND1-218ENST00000528232 C14orf166Q9Y224 244 aaKnown RBP6.85□□□□□ -1.31
CTNND1-218ENST00000528232 NOP16Q9Y3C1 178 aaKnown RBP6.85□□□□□ -1.31
CTNND1-218ENST00000528232 TCRBV3S1A0A5B6 114 aa6.84□□□□□ -1.31
CTNND1-218ENST00000528232 J3QLW9 94 aa6.84□□□□□ -1.31
CTNND1-218ENST00000528232 GPR37L1O60883 481 aa6.84□□□□□ -1.31
CTNND1-218ENST00000528232 B4GALT2O60909 372 aa6.84□□□□□ -1.31
CTNND1-218ENST00000528232 RGS9O75916 674 aaPredicted RBP6.84□□□□□ -1.31
CTNND1-218ENST00000528232 SORBS2O94875 1100 aaKnown RBP6.84□□□□□ -1.31
CTNND1-218ENST00000528232 LAMP1P11279 417 aa6.84□□□□□ -1.31
CTNND1-218ENST00000528232 GP1BBP13224 206 aa6.84□□□□□ -1.31
CTNND1-218ENST00000528232 ZNF19P17023 458 aa6.84□□□□□ -1.31
CTNND1-218ENST00000528232 PCGF2P35227 344 aa6.84□□□□□ -1.31
CTNND1-218ENST00000528232 TAS2R38P59533 333 aa6.84□□□□□ -1.31
CTNND1-218ENST00000528232 ARFRP1Q13795 201 aa6.84□□□□□ -1.31
CTNND1-218ENST00000528232 AAK1Q2M2I8 961 aa6.84□□□□□ -1.31
CTNND1-218ENST00000528232 UGT3A2Q3SY77 523 aa6.84□□□□□ -1.31
CTNND1-218ENST00000528232 SCGB2B2Q4G0G5 96 aa6.84□□□□□ -1.31
CTNND1-218ENST00000528232 FLYWCH1Q4VC44 716 aa6.84□□□□□ -1.31
CTNND1-218ENST00000528232 CPZQ66K79 652 aa6.84□□□□□ -1.31
CTNND1-218ENST00000528232 METAP1DQ6UB28 335 aaPredicted RBP6.84□□□□□ -1.31
CTNND1-218ENST00000528232 CLECL1Q8IZS7 167 aa6.84□□□□□ -1.31
CTNND1-218ENST00000528232 KLHDC9Q8NEP7 349 aa6.84□□□□□ -1.31
CTNND1-218ENST00000528232 OR6Q1Q8NGQ2 317 aa6.84□□□□□ -1.31
CTNND1-218ENST00000528232 NETO1Q8TDF5 533 aa6.84□□□□□ -1.31
CTNND1-218ENST00000528232 ADAMTS18Q8TE60 1221 aa6.84□□□□□ -1.31
CTNND1-218ENST00000528232 ISL2Q96A47 359 aa6.84□□□□□ -1.31
CTNND1-218ENST00000528232 TREX2Q9BQ50 279 aaPredicted RBP6.84□□□□□ -1.31
CTNND1-218ENST00000528232 NPLQ9BXD5 320 aaPredicted RBP6.84□□□□□ -1.31
CTNND1-218ENST00000528232 MEIOCA2RUB1 952 aa6.84□□□□□ -1.31
CTNND1-218ENST00000528232 OR6C74A6NCV1 312 aa6.84□□□□□ -1.31
CTNND1-218ENST00000528232 A8MV72 311 aaPredicted RBP6.84□□□□□ -1.31
CTNND1-218ENST00000528232 SMAD6O43541 496 aaKnown RBP6.84□□□□□ -1.31
CTNND1-218ENST00000528232 GATCO43716 136 aaKnown RBP6.84□□□□□ -1.31
CTNND1-218ENST00000528232 SC5DO75845 299 aa6.84□□□□□ -1.31
CTNND1-218ENST00000528232 FCER2P06734 321 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms