RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 OTCP00480 354 aa21.64■■□□□ 1.05
USP47-205ENST00000525257 CRHP06850 196 aa21.64■■□□□ 1.05
USP47-205ENST00000525257 PCSK6P29122 969 aa21.64■■□□□ 1.05
USP47-205ENST00000525257 CCKARP32238 428 aa21.64■■□□□ 1.05
USP47-205ENST00000525257 MC3RP41968 323 aa21.64■■□□□ 1.05
USP47-205ENST00000525257 CDH13P55290 713 aa21.64■■□□□ 1.05
USP47-205ENST00000525257 B3GALT5-AS1P59052 145 aa21.64■■□□□ 1.05
USP47-205ENST00000525257 TRA2BP62995 288 aaKnown RBP21.64■■□□□ 1.05
USP47-205ENST00000525257 ACKR1Q16570 336 aa21.64■■□□□ 1.05
USP47-205ENST00000525257 ZNF474Q6S9Z5 364 aaPredicted RBP21.64■■□□□ 1.05
USP47-205ENST00000525257 BTLAQ7Z6A9 289 aa21.64■■□□□ 1.05
USP47-205ENST00000525257 YTHDF3Q7Z739 585 aaKnown RBP21.64■■□□□ 1.05
USP47-205ENST00000525257 PRIMA1Q86XR5 153 aa21.64■■□□□ 1.05
USP47-205ENST00000525257 OR9A2Q8NGT5 310 aa21.64■■□□□ 1.05
USP47-205ENST00000525257 ZNF483Q8TF39 744 aaPredicted RBP21.64■■□□□ 1.05
USP47-205ENST00000525257 EFHD2Q96C19 240 aaPredicted RBP21.64■■□□□ 1.05
USP47-205ENST00000525257 PERPQ96FX8 193 aa21.64■■□□□ 1.05
USP47-205ENST00000525257 PGM2Q96G03 612 aa21.64■■□□□ 1.05
USP47-205ENST00000525257 VSTM2LQ96N03 204 aa21.64■■□□□ 1.05
USP47-205ENST00000525257 NMRK1Q9NWW6 199 aa21.64■■□□□ 1.05
USP47-205ENST00000525257 BCAS2O75934 225 aaPredicted RBP21.63■■□□□ 1.05
USP47-205ENST00000525257 IL3P08700 152 aa21.63■■□□□ 1.05
USP47-205ENST00000525257 FPR1P21462 350 aa21.63■■□□□ 1.05
USP47-205ENST00000525257 CRYGSP22914 178 aa21.63■■□□□ 1.05
USP47-205ENST00000525257 PHBP35232 272 aa21.63■■□□□ 1.05
USP47-205ENST00000525257 MAGEA12P43365 314 aa21.63■■□□□ 1.05
USP47-205ENST00000525257 GAS1P54826 345 aa21.63■■□□□ 1.05
USP47-205ENST00000525257 BCL2A1Q16548 175 aa21.63■■□□□ 1.05
USP47-205ENST00000525257 ERCC6LQ2NKX8 1250 aa21.63■■□□□ 1.05
USP47-205ENST00000525257 TCHHL1Q5QJ38 904 aaPredicted RBP21.63■■□□□ 1.05
USP47-205ENST00000525257 ZNF550Q7Z398 422 aa21.63■■□□□ 1.05
USP47-205ENST00000525257 GBP7Q8N8V2 638 aaPredicted RBP21.63■■□□□ 1.05
USP47-205ENST00000525257 FIG4Q92562 907 aa21.63■■□□□ 1.05
USP47-205ENST00000525257 EXOSC8Q96B26 276 aaKnown RBP21.63■■□□□ 1.05
USP47-205ENST00000525257 ACSS3Q9H6R3 686 aa21.63■■□□□ 1.05
USP47-205ENST00000525257 FOLH1BQ9HBA9 442 aa21.63■■□□□ 1.05
USP47-205ENST00000525257 NINJ2Q9NZG7 142 aa21.63■■□□□ 1.05
USP47-205ENST00000525257 VPS29Q9UBQ0 182 aa21.63■■□□□ 1.05
USP47-205ENST00000525257 TRIM64A6NGJ6 449 aa21.62■■□□□ 1.05
USP47-205ENST00000525257 TRIM64BA6NI03 449 aa21.62■■□□□ 1.05
USP47-205ENST00000525257 H0YC42 278 aa21.62■■□□□ 1.05
USP47-205ENST00000525257 SCO2O43819 266 aa21.62■■□□□ 1.05
USP47-205ENST00000525257 OR4F21O95013 312 aa21.62■■□□□ 1.05
USP47-205ENST00000525257 PEPDP12955 493 aa21.62■■□□□ 1.05
USP47-205ENST00000525257 POU2F1P14859 743 aa21.62■■□□□ 1.05
USP47-205ENST00000525257 UGT2B10P36537 528 aa21.62■■□□□ 1.05
USP47-205ENST00000525257 KIR2DL2P43627 348 aaPredicted RBP21.62■■□□□ 1.05
USP47-205ENST00000525257 TPD52P55327 224 aaPredicted RBP21.62■■□□□ 1.05
USP47-205ENST00000525257 DSCR4P56555 118 aaPredicted RBP21.62■■□□□ 1.05
USP47-205ENST00000525257 SLC7A5Q01650 507 aa21.62■■□□□ 1.05
USP47-205ENST00000525257 TSNAXIP1Q2TAA8 658 aa21.62■■□□□ 1.05
USP47-205ENST00000525257 SLC44A2Q8IWA5 706 aaPredicted RBP21.62■■□□□ 1.05
USP47-205ENST00000525257 MEIOBQ8N635 442 aa21.62■■□□□ 1.05
USP47-205ENST00000525257 OR4N2Q8NGD1 307 aa21.62■■□□□ 1.05
USP47-205ENST00000525257 RNF138Q8WVD3 245 aa21.62■■□□□ 1.05
USP47-205ENST00000525257 ZC3HAV1LQ96H79 300 aaKnown RBP21.62■■□□□ 1.05
USP47-205ENST00000525257 HS3ST6Q96QI5 342 aa21.62■■□□□ 1.05
USP47-205ENST00000525257 PIGQQ9BRB3 760 aa21.62■■□□□ 1.05
USP47-205ENST00000525257 BDH2Q9BUT1 245 aa21.62■■□□□ 1.05
USP47-205ENST00000525257 DSN1Q9H410 356 aa21.62■■□□□ 1.05
USP47-205ENST00000525257 PPP4R1LQ9P1A2 415 aa21.62■■□□□ 1.05
USP47-205ENST00000525257 TRPS1Q9UHF7 1281 aa21.62■■□□□ 1.05
USP47-205ENST00000525257 ZNF225Q9UK10 706 aa21.62■■□□□ 1.05
USP47-205ENST00000525257 KIAA1324LA8MWY0 1029 aaPredicted RBP21.61■■□□□ 1.05
USP47-205ENST00000525257 INHBAP08476 426 aa21.61■■□□□ 1.05
USP47-205ENST00000525257 CTAGE8P0CG41 777 aa21.61■■□□□ 1.05
USP47-205ENST00000525257 KCNJ5P48544 419 aa21.61■■□□□ 1.05
USP47-205ENST00000525257 PCYT1AP49585 367 aa21.61■■□□□ 1.05
USP47-205ENST00000525257 PNLIPRP2P54317 469 aa21.61■■□□□ 1.05
USP47-205ENST00000525257 RAET1LQ5VY80 246 aa21.61■■□□□ 1.05
USP47-205ENST00000525257 PRSS57Q6UWY2 283 aa21.61■■□□□ 1.05
USP47-205ENST00000525257 CTAGE4Q8IX94 777 aa21.61■■□□□ 1.05
USP47-205ENST00000525257 ERP27Q96DN0 273 aa21.61■■□□□ 1.05
USP47-205ENST00000525257 ZNF845Q96IR2 970 aaPredicted RBP21.61■■□□□ 1.05
USP47-205ENST00000525257 ZDHHC18Q9NUE0 388 aa21.61■■□□□ 1.05
USP47-205ENST00000525257 MCM8Q9UJA3 840 aa21.61■■□□□ 1.05
USP47-205ENST00000525257 OR10H1Q9Y4A9 318 aa21.61■■□□□ 1.05
USP47-205ENST00000525257 DSCAMO60469 2012 aa21.61■■□□□ 1.05
USP47-205ENST00000525257 HIVEP2P31629 2446 aa21.6■■□□□ 1.05
USP47-205ENST00000525257 A8MT66 165 aa21.6■■□□□ 1.05
USP47-205ENST00000525257 SEC14L5O43304 696 aa21.6■■□□□ 1.05
USP47-205ENST00000525257 CHN1P15882 459 aa21.6■■□□□ 1.05
USP47-205ENST00000525257 HK1P19367 917 aa21.6■■□□□ 1.05
USP47-205ENST00000525257 EVI2BP34910 448 aa21.6■■□□□ 1.05
USP47-205ENST00000525257 CLDN15P56746 228 aa21.6■■□□□ 1.05
USP47-205ENST00000525257 CDYL2Q8N8U2 506 aa21.6■■□□□ 1.05
USP47-205ENST00000525257 MTBPQ96DY7 904 aa21.6■■□□□ 1.05
USP47-205ENST00000525257 MRPL57Q9BQC6 102 aaKnown RBP21.6■■□□□ 1.05
USP47-205ENST00000525257 SLC39A3Q9BRY0 314 aa21.6■■□□□ 1.05
USP47-205ENST00000525257 PINK1Q9BXM7 581 aa21.6■■□□□ 1.05
USP47-205ENST00000525257 MRPL46Q9H2W6 279 aaKnown RBP21.6■■□□□ 1.05
USP47-205ENST00000525257 ELOVL5Q9NYP7 299 aa21.6■■□□□ 1.05
USP47-205ENST00000525257 SENP1Q9P0U3 644 aa21.6■■□□□ 1.05
USP47-205ENST00000525257 RAI1Q7Z5J4 1906 aaPredicted RBP21.59■■□□□ 1.05
USP47-205ENST00000525257 GNG14A0A1W2PPG7 69 aa21.59■■□□□ 1.05
USP47-205ENST00000525257 C16orf97H3BN30 126 aa21.59■■□□□ 1.05
USP47-205ENST00000525257 MANBAO00462 879 aa21.59■■□□□ 1.05
USP47-205ENST00000525257 PCDH7O60245 1069 aa21.59■■□□□ 1.05
USP47-205ENST00000525257 SUCLG1P53597 346 aaKnown RBP21.59■■□□□ 1.05
USP47-205ENST00000525257 PSPHP78330 225 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms