RNA–Protein interactions for RNA: ENST00000525074.5

TRIM3-203, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRIM3, Length 3,044 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-203ENST00000525074 HLA-DPB1P04440 258 aa12.37□□□□□ -0.43
TRIM3-203ENST00000525074 HLA-FP30511 346 aa12.37□□□□□ -0.43
TRIM3-203ENST00000525074 SP140Q13342 867 aa12.37□□□□□ -0.43
TRIM3-203ENST00000525074 GRK1Q15835 563 aa12.37□□□□□ -0.43
TRIM3-203ENST00000525074 ASTLQ6HA08 431 aaPredicted RBP12.37□□□□□ -0.43
TRIM3-203ENST00000525074 GAREM2Q75VX8 874 aa12.37□□□□□ -0.43
TRIM3-203ENST00000525074 ZNF354BQ96LW1 612 aa12.37□□□□□ -0.43
TRIM3-203ENST00000525074 SPRTNQ9H040 489 aaPredicted RBP12.37□□□□□ -0.43
TRIM3-203ENST00000525074 NDOR1Q9UHB4 597 aa12.37□□□□□ -0.43
TRIM3-203ENST00000525074 NTNG1Q9Y2I2 539 aa12.37□□□□□ -0.43
TRIM3-203ENST00000525074 SIRT4Q9Y6E7 314 aaPredicted RBP12.37□□□□□ -0.43
TRIM3-203ENST00000525074 ARRDC5A6NEK1 342 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 ANTXRLA6NF34 631 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 HMGN4O00479 90 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 HYAL3O43820 417 aaPredicted RBP12.36□□□□□ -0.43
TRIM3-203ENST00000525074 PRKRAO75569 313 aaKnown RBP12.36□□□□□ -0.43
TRIM3-203ENST00000525074 GLULP15104 373 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 NPPBP16860 134 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 NAGAP17050 411 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 CTRB1P17538 263 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 TBXA2RP21731 343 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 VIPR1P32241 457 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 METAP1P53582 386 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 RAB14P61106 215 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 STXBP1P61764 594 aaKnown RBP12.36□□□□□ -0.43
TRIM3-203ENST00000525074 CTRB2Q6GPI1 263 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 TMEM107Q6UX40 140 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 SLC36A4Q6YBV0 504 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 ZNF687Q8N1G0 1237 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 FTMTQ8N4E7 242 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 KAT2AQ92830 837 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 LINC00052Q96N35 136 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 MRPL9Q9BYD2 267 aaKnown RBP12.36□□□□□ -0.43
TRIM3-203ENST00000525074 GHITMQ9H3K2 345 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 MED20Q9H944 212 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 OR6C2Q9NZP2 312 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 FLVCR2Q9UPI3 526 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 SCN5AQ14524 2016 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 TMEM129A0AVI4 362 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 NEDD8-MDP1E9PL57 170 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 LGALS8O00214 317 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 SOCS6O14544 535 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 SIGLEC5O15389 551 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 GATBO75879 557 aaKnown RBP12.36□□□□□ -0.43
TRIM3-203ENST00000525074 GNSP15586 552 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 UQCRC2P22695 453 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 FGF9P31371 208 aaPredicted RBP12.36□□□□□ -0.43
TRIM3-203ENST00000525074 SLC16A1P53985 500 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 SIGLEC14Q08ET2 396 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 RAB40BQ12829 278 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 ZNF155Q12901 538 aaPredicted RBP12.36□□□□□ -0.43
TRIM3-203ENST00000525074 ST3GAL2Q16842 350 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 GPR139Q6DWJ6 353 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 SLC8B1Q6J4K2 584 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 SLC27A4Q6P1M0 643 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 SMARCD3Q6STE5 483 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 ARL9Q6T311 187 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 CFAP77Q6ZQR2 320 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 PRSS45Q7RTY3 260 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 TMEM25Q86YD3 366 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 ARIH2OSQ8N7S6 290 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 RASGEF1AQ8N9B8 481 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 SERHL2Q9H4I8 314 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 RANBP3Q9H6Z4 567 aaPredicted RBP12.36□□□□□ -0.43
TRIM3-203ENST00000525074 DDX31Q9H8H2 851 aaKnown RBP12.36□□□□□ -0.43
TRIM3-203ENST00000525074 MAN2C1Q9NTJ4 1040 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 UBQLN2Q9UHD9 624 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 TMEM5Q9Y2B1 443 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 WDR87Q6ZQQ6 2873 aa12.36□□□□□ -0.43
TRIM3-203ENST00000525074 IGLV3-16A0A075B6K0 115 aa12.35□□□□□ -0.43
TRIM3-203ENST00000525074 SERTM1A2A2V5 107 aa12.35□□□□□ -0.43
TRIM3-203ENST00000525074 CPSF4LA6NMK7 179 aaKnown RBP12.35□□□□□ -0.43
TRIM3-203ENST00000525074 SERPINI2O75830 405 aa12.35□□□□□ -0.43
TRIM3-203ENST00000525074 TCRBP04435 133 aa12.35□□□□□ -0.43
TRIM3-203ENST00000525074 SERPIND1P05546 499 aa12.35□□□□□ -0.43
TRIM3-203ENST00000525074 PRKACAP17612 351 aa12.35□□□□□ -0.43
TRIM3-203ENST00000525074 HSD3B2P26439 372 aa12.35□□□□□ -0.43
TRIM3-203ENST00000525074 GPR4P46093 362 aa12.35□□□□□ -0.43
TRIM3-203ENST00000525074 KCNJ5P48544 419 aa12.35□□□□□ -0.43
TRIM3-203ENST00000525074 RNF144AP50876 292 aaPredicted RBP12.35□□□□□ -0.43
TRIM3-203ENST00000525074 VASNQ6EMK4 673 aa12.35□□□□□ -0.43
TRIM3-203ENST00000525074 PRICKLE2Q7Z3G6 844 aa12.35□□□□□ -0.43
TRIM3-203ENST00000525074 MS4A15Q8N5U1 240 aa12.35□□□□□ -0.43
TRIM3-203ENST00000525074 ZNF527Q8NB42 609 aa12.35□□□□□ -0.43
TRIM3-203ENST00000525074 ARSGQ96EG1 525 aa12.35□□□□□ -0.43
TRIM3-203ENST00000525074 TMEM169Q96HH4 297 aa12.35□□□□□ -0.43
TRIM3-203ENST00000525074 F2RL3Q96RI0 385 aa12.35□□□□□ -0.43
TRIM3-203ENST00000525074 CACNG6Q9BXT2 260 aa12.35□□□□□ -0.43
TRIM3-203ENST00000525074 OSGEPL1Q9H4B0 414 aa12.35□□□□□ -0.43
TRIM3-203ENST00000525074 METTL17Q9H7H0 456 aaPredicted RBP12.35□□□□□ -0.43
TRIM3-203ENST00000525074 GREM1O60565 184 aa12.35□□□□□ -0.43
TRIM3-203ENST00000525074 SOCS5O75159 536 aa12.35□□□□□ -0.43
TRIM3-203ENST00000525074 DGCR2P98153 550 aa12.35□□□□□ -0.43
TRIM3-203ENST00000525074 TCEA2Q15560 299 aa12.35□□□□□ -0.43
TRIM3-203ENST00000525074 SFRP4Q6FHJ7 346 aaPredicted RBP12.35□□□□□ -0.43
TRIM3-203ENST00000525074 TMEM81Q6P7N7 255 aa12.35□□□□□ -0.43
TRIM3-203ENST00000525074 ARSKQ6UWY0 536 aa12.35□□□□□ -0.43
TRIM3-203ENST00000525074 RTL4Q6ZR62 310 aa12.35□□□□□ -0.43
TRIM3-203ENST00000525074 SIAH3Q8IW03 269 aa12.35□□□□□ -0.43
TRIM3-203ENST00000525074 CFAP206Q8IYR0 622 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms