RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 SSX8Q7RTT4 187 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 OTOAQ7RTW8 1153 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 BNIPLQ7Z465 357 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 PCGF5Q86SE9 256 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 PIGZQ86VD9 579 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 CCAR2Q8N163 923 aaKnown RBP1.37□□□□□ -2.19
CD44-212ENST00000524922 ATP6V0D2Q8N8Y2 350 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 GPATCH11Q8N954 259 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 ZNF383Q8NA42 475 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 XXYLT1Q8NBI6 393 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 ZNF397Q8NF99 534 aaPredicted RBP1.37□□□□□ -2.19
CD44-212ENST00000524922 OR2AP1Q8NGE2 309 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 CXorf40AQ8TE69 158 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 RNF139Q8WU17 664 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 CT55Q8WUE5 264 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 PDCD6IPQ8WUM4 868 aaKnown RBP1.37□□□□□ -2.19
CD44-212ENST00000524922 HPSE2Q8WWQ2 592 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 ST8SIA4Q92187 359 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 HSD17B8Q92506 261 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 NDRG1Q92597 394 aaKnown RBP1.37□□□□□ -2.19
CD44-212ENST00000524922 SEMA4DQ92854 862 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 NT5C3BQ969T7 300 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 FAM149B1Q96BN6 582 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 FAF2Q96CS3 445 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 OMA1Q96E52 524 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 CALML4Q96GE6 196 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 ZNF514Q96K75 400 aaPredicted RBP1.37□□□□□ -2.19
CD44-212ENST00000524922 GPR137Q96N19 417 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 SIGLEC12Q96PQ1 595 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 MCCC1Q96RQ3 725 aaPredicted RBP1.37□□□□□ -2.19
CD44-212ENST00000524922 LYSMD1Q96S90 227 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 KCNK16Q96T55 309 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 OLFM1Q99784 485 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 ZNF559Q9BR84 538 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 MRPL45Q9BRJ2 306 aaKnown RBP1.37□□□□□ -2.19
CD44-212ENST00000524922 APOOQ9BUR5 198 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 AP1M1Q9BXS5 423 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 RSPO3Q9BXY4 272 aaPredicted RBP1.37□□□□□ -2.19
CD44-212ENST00000524922 PITPNM3Q9BZ71 974 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 MIS12Q9H081 205 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 BLZF1Q9H2G9 400 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 TNMDQ9H2S6 317 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 SLA2Q9H6Q3 261 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 ATP13A3Q9H7F0 1226 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 FANCEQ9HB96 536 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 RANGRFQ9HD47 186 aaPredicted RBP1.37□□□□□ -2.19
CD44-212ENST00000524922 PHPT1Q9NRX4 125 aaPredicted RBP1.37□□□□□ -2.19
CD44-212ENST00000524922 INTS9Q9NV88 658 aaKnown RBP1.37□□□□□ -2.19
CD44-212ENST00000524922 IL17CQ9P0M4 197 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 CHORDC1Q9UHD1 332 aaPredicted RBP1.37□□□□□ -2.19
CD44-212ENST00000524922 RARRES3Q9UL19 164 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 SNX7Q9UNH6 387 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 MRPS2Q9Y399 296 aaKnown RBP1.37□□□□□ -2.19
CD44-212ENST00000524922 COQ4Q9Y3A0 265 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 PPIL1Q9Y3C6 166 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 L3MBTL1Q9Y468 752 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 NME7Q9Y5B8 376 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 MAU2Q9Y6X3 613 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 TRIP11Q15643 1979 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 ABCA1O95477 2261 aa1.37□□□□□ -2.19
CD44-212ENST00000524922 STAB2Q8WWQ8 2551 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 IGLV3-12A0A075B6K2 115 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 IGHV3OR16-10A0A075B7F0 116 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 PVALEFA0A1B0GWK0 134 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 IGLON5A6NGN9 336 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 C15orf62A8K5M9 175 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 E7ENQ6 273 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 E9PMD0 336 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 H3BMH7 237 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 J3QR06 171 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 KPNA3O00505 521 aaPredicted RBP1.36□□□□□ -2.19
CD44-212ENST00000524922 CCL21O00585 134 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 RTL8CO15255 209 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 RAD51BO15315 384 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 ATP6V0E1O15342 81 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 P4HA2O15460 535 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 HCRTR2O43614 444 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 CD5LO43866 347 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 HSF2BPO75031 334 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 TOXO94900 526 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 ZWINTO95229 277 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 LCA5LO95447 670 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 SERPINA7P05543 415 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 CAPN1P07384 714 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 DUX4L4P0CJ87 422 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 PRKAR1AP10644 381 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 ACP2P11117 423 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 VDRP11473 427 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 F3P13726 295 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 HSD3B1P14060 373 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 PRLRP16471 622 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 ZNF18P17022 549 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 MAT2AP31153 395 aaKnown RBP1.36□□□□□ -2.19
CD44-212ENST00000524922 MATR3P43243 847 aaKnown RBP eCLIP1.36□□□□□ -2.19
CD44-212ENST00000524922 ACOT2P49753 483 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 TKTL1P51854 596 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 CCNHP51946 323 aaPredicted RBP1.36□□□□□ -2.19
CD44-212ENST00000524922 GSCP56915 257 aaPredicted RBP1.36□□□□□ -2.19
CD44-212ENST00000524922 MAP3K7CLP57077 242 aa1.36□□□□□ -2.19
CD44-212ENST00000524922 YBEYP58557 167 aaPredicted RBP1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms