RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 PDX1P52945 283 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 LIMK1P53667 647 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 HSPA14Q0VDF9 509 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 PRKG2Q13237 762 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 FASTKQ14296 549 aaKnown RBP2.77□□□□□ -1.97
CSDE1-208ENST00000524652 NR1D2Q14995 579 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 ELOCQ15369 112 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 OR4D1Q15615 310 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 PHKG1Q16816 387 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 SYT16Q17RD7 645 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 C18orf21Q32NC0 220 aaPredicted RBP2.77□□□□□ -1.97
CSDE1-208ENST00000524652 TTMPQ5BVD1 217 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 FBXO48Q5FWF7 155 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 SH2D4BQ5SQS7 431 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 PLEKHS1Q5SXH7 462 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.77□□□□□ -1.97
CSDE1-208ENST00000524652 GRTP1Q5TC63 336 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 LYPLAL1Q5VWZ2 237 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 CES4AQ5XG92 561 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 PTRHD1Q6GMV3 140 aaKnown RBP2.77□□□□□ -1.97
CSDE1-208ENST00000524652 IYDQ6PHW0 289 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 IL27RAQ6UWB1 636 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 SBSNQ6UWP8 590 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 WASH2PQ6VEQ5 465 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 RPS27LQ71UM5 84 aaKnown RBP2.77□□□□□ -1.97
CSDE1-208ENST00000524652 RABEPKQ7Z6M1 372 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 TAF8Q7Z7C8 310 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 SDCCAG8Q86SQ7 713 aaPredicted RBP2.77□□□□□ -1.97
CSDE1-208ENST00000524652 AMZ2Q86W34 360 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 LRRC6Q86X45 466 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 GKN2Q86XP6 184 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 MARCH9Q86YJ5 346 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 TDRPQ86YL5 185 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 NAXDQ8IW45 347 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 SLC22A15Q8IZD6 547 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 ARL14Q8N4G2 192 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 ZBTB2Q8N680 514 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 LINC01555Q8NAE3 123 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 DNAAF1Q8NEP3 725 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 DEFB124Q8NES8 71 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 OR52E1Q8NGJ3 308 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 FLVCR1-AS1Q8TAF5 88 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 HM13Q8TCT9 377 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 HEXDCQ8WVB3 486 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 KCTD4Q8WVF5 259 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.77□□□□□ -1.97
CSDE1-208ENST00000524652 TANKQ92844 425 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.77□□□□□ -1.97
CSDE1-208ENST00000524652 ESAMQ96AP7 390 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 NXNL1Q96CM4 212 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 MOCOSQ96EN8 888 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 LINGO1Q96FE5 620 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 DCUN1D1Q96GG9 259 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 ELMO2Q96JJ3 720 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 UBXN10Q96LJ8 280 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 C12orf66Q96MD2 445 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 PPM1MQ96MI6 270 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 ATOH8Q96SQ7 321 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 CYTH2Q99418 400 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 TBC1D10AQ9BXI6 508 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 GSDMCQ9BYG8 508 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 DPEP2Q9H4A9 486 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 TMEM9BQ9NQ34 198 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 WASH6PQ9NQA3 447 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 SPHK1Q9NYA1 384 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 NLGN3Q9NZ94 848 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 TMEM9Q9P0T7 183 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 PSMC3IPQ9P2W1 217 aaPredicted RBP2.77□□□□□ -1.97
CSDE1-208ENST00000524652 SPASTQ9UBP0 616 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 NDRG3Q9UGV2 375 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 EMCNQ9ULC0 261 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 CORO1CQ9ULV4 474 aaPredicted RBP2.77□□□□□ -1.97
CSDE1-208ENST00000524652 GAB2Q9UQC2 676 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 TCF19Q9Y242 345 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 MMP24Q9Y5R2 645 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 CSNK1G3Q9Y6M4 447 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 EML6Q6ZMW3 1958 aa2.77□□□□□ -1.97
CSDE1-208ENST00000524652 PRRC2CQ9Y520 2896 aaKnown RBP2.76□□□□□ -1.97
CSDE1-208ENST00000524652 TLN1Q9Y490 2541 aaKnown RBP2.76□□□□□ -1.97
CSDE1-208ENST00000524652 MED13Q9UHV7 2174 aa2.76□□□□□ -1.97
CSDE1-208ENST00000524652 IGHV1OR21-1A0A087WYE8 117 aa2.76□□□□□ -1.97
CSDE1-208ENST00000524652 SPAARA0A1B0GVQ0 90 aa2.76□□□□□ -1.97
CSDE1-208ENST00000524652 A0A1W2PNU3 283 aaPredicted RBP2.76□□□□□ -1.97
CSDE1-208ENST00000524652 A0A1W2PPV9 198 aa2.76□□□□□ -1.97
CSDE1-208ENST00000524652 NEMP2A6NFY4 417 aa2.76□□□□□ -1.97
CSDE1-208ENST00000524652 PDZK1P1A8MUH7 402 aa2.76□□□□□ -1.97
CSDE1-208ENST00000524652 GOLGA8RI6L899 631 aa2.76□□□□□ -1.97
CSDE1-208ENST00000524652 UBXN8O00124 270 aa2.76□□□□□ -1.97
CSDE1-208ENST00000524652 RASGRF2O14827 1237 aa2.76□□□□□ -1.97
CSDE1-208ENST00000524652 SLC30A4O14863 429 aa2.76□□□□□ -1.97
CSDE1-208ENST00000524652 YKT6O15498 198 aa2.76□□□□□ -1.97
CSDE1-208ENST00000524652 TAPBPO15533 448 aa2.76□□□□□ -1.97
CSDE1-208ENST00000524652 FLRT2O43155 660 aa2.76□□□□□ -1.97
CSDE1-208ENST00000524652 HCRTR1O43613 425 aa2.76□□□□□ -1.97
CSDE1-208ENST00000524652 SLC25A17O43808 307 aa2.76□□□□□ -1.97
CSDE1-208ENST00000524652 TYROBPO43914 113 aa2.76□□□□□ -1.97
CSDE1-208ENST00000524652 FGF17O60258 216 aa2.76□□□□□ -1.97
CSDE1-208ENST00000524652 DFNA5O60443 496 aa2.76□□□□□ -1.97
CSDE1-208ENST00000524652 VPS26AO75436 327 aa2.76□□□□□ -1.97
CSDE1-208ENST00000524652 CLDN14O95500 239 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms