RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 PEX14O75381 377 aa9.6□□□□□ -0.87
SPIDR-224ENST00000524126 PEPDP12955 493 aa9.6□□□□□ -0.87
SPIDR-224ENST00000524126 PPP3CBP16298 524 aa9.6□□□□□ -0.87
SPIDR-224ENST00000524126 CALCRP30988 508 aa9.6□□□□□ -0.87
SPIDR-224ENST00000524126 PCGF2P35227 344 aa9.6□□□□□ -0.87
SPIDR-224ENST00000524126 RAD52P43351 418 aa9.6□□□□□ -0.87
SPIDR-224ENST00000524126 PGFP49763 221 aa9.6□□□□□ -0.87
SPIDR-224ENST00000524126 PSEN2P49810 448 aa9.6□□□□□ -0.87
SPIDR-224ENST00000524126 SYT14P1Q58G82 188 aa9.6□□□□□ -0.87
SPIDR-224ENST00000524126 XKR6Q5GH73 641 aa9.6□□□□□ -0.87
SPIDR-224ENST00000524126 TMEM255AQ5JRV8 349 aa9.6□□□□□ -0.87
SPIDR-224ENST00000524126 AFMIDQ63HM1 303 aa9.6□□□□□ -0.87
SPIDR-224ENST00000524126 CD200R1LQ6Q8B3 271 aa9.6□□□□□ -0.87
SPIDR-224ENST00000524126 ESPNLQ6ZVH7 1005 aa9.6□□□□□ -0.87
SPIDR-224ENST00000524126 RTL3Q8N8U3 475 aaKnown RBP9.6□□□□□ -0.87
SPIDR-224ENST00000524126 ZNF565Q8N9K5 539 aa9.6□□□□□ -0.87
SPIDR-224ENST00000524126 OR10K1Q8NGX5 313 aa9.6□□□□□ -0.87
SPIDR-224ENST00000524126 CD99L2Q8TCZ2 262 aa9.6□□□□□ -0.87
SPIDR-224ENST00000524126 RXFP4Q8TDU9 374 aa9.6□□□□□ -0.87
SPIDR-224ENST00000524126 THAP4Q8WY91 577 aa9.6□□□□□ -0.87
SPIDR-224ENST00000524126 EXOSC8Q96B26 276 aaKnown RBP9.6□□□□□ -0.87
SPIDR-224ENST00000524126 ZNF582Q96NG8 517 aaPredicted RBP9.6□□□□□ -0.87
SPIDR-224ENST00000524126 MS4A4EQ96PG1 132 aa9.6□□□□□ -0.87
SPIDR-224ENST00000524126 YIPF4Q9BSR8 244 aa9.6□□□□□ -0.87
SPIDR-224ENST00000524126 CINPQ9BW66 212 aaPredicted RBP9.6□□□□□ -0.87
SPIDR-224ENST00000524126 BTBD1Q9H0C5 482 aa9.6□□□□□ -0.87
SPIDR-224ENST00000524126 RNF39Q9H2S5 420 aa9.6□□□□□ -0.87
SPIDR-224ENST00000524126 TESQ9UGI8 421 aaKnown RBP9.6□□□□□ -0.87
SPIDR-224ENST00000524126 FKBPLQ9UIM3 349 aa9.6□□□□□ -0.87
SPIDR-224ENST00000524126 CA5BQ9Y2D0 317 aa9.6□□□□□ -0.87
SPIDR-224ENST00000524126 A0A1B0GV90 55 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 ABHD14A-ACY1A0A1B0GW23 586 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 FFAR1O14842 300 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 HMBSP08397 361 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 PRPS2P11908 318 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 UGT2B7P16662 529 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 ZNF140P52738 457 aaPredicted RBP9.59□□□□□ -0.87
SPIDR-224ENST00000524126 GAS1P54826 345 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 SEC61A1P61619 476 aaKnown RBP9.59□□□□□ -0.87
SPIDR-224ENST00000524126 PRR5P85299 388 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 SREBF2Q12772 1141 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 TRAM2Q15035 370 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 TSC22D1Q15714 1073 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 ZNF425Q6IV72 752 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 CXorf57Q6NSI4 855 aaKnown RBP9.59□□□□□ -0.87
SPIDR-224ENST00000524126 PRSS45Q7RTY3 260 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 LRRC28Q86X40 367 aaPredicted RBP9.59□□□□□ -0.87
SPIDR-224ENST00000524126 SYT12Q8IV01 421 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 LNX2Q8N448 690 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 C11orf65Q8NCR3 313 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 OR8J1Q8NGP2 316 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 OR51Q1Q8NH59 317 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 ADAMTS19Q8TE59 1207 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 SEMA3GQ9NS98 782 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 ZSCAN32Q9NX65 697 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 GHRLQ9UBU3 117 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 ZNF69Q9UC07 566 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 RASD1Q9Y272 281 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 GPR52Q9Y2T5 361 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 PDCD11Q14690 1871 aaKnown RBP9.59□□□□□ -0.87
SPIDR-224ENST00000524126 PIRO00625 290 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 FGF10O15520 208 aaPredicted RBP9.59□□□□□ -0.87
SPIDR-224ENST00000524126 TXNL1O43396 289 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 GALR3O60755 368 aaPredicted RBP9.59□□□□□ -0.87
SPIDR-224ENST00000524126 RECQL4O94761 1208 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 CYBAP13498 195 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 RBMS1P29558 406 aaKnown RBP9.59□□□□□ -0.87
SPIDR-224ENST00000524126 MC4RP32245 332 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 RFX3P48380 749 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 MTAPQ13126 283 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 BOP1Q14137 746 aaKnown RBP9.59□□□□□ -0.87
SPIDR-224ENST00000524126 MICBQ29980 383 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 ZNF791Q3KP31 576 aaPredicted RBP9.59□□□□□ -0.87
SPIDR-224ENST00000524126 FAM27D1Q5T7N8 215 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 RNLSQ5VYX0 342 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 B3GNTL1Q67FW5 361 aaPredicted RBP9.59□□□□□ -0.87
SPIDR-224ENST00000524126 TECPR1Q7Z6L1 1165 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 OAFQ86UD1 273 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 IZUMO1Q8IYV9 350 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 HDDC3Q8N4P3 179 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 OR56B4Q8NH76 319 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 RNFT2Q96EX2 444 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 HHIPQ96QV1 700 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 OR1F2PQ96R84 312 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 UBL7Q96S82 380 aaPredicted RBP9.59□□□□□ -0.87
SPIDR-224ENST00000524126 C7orf50Q9BRJ6 194 aaKnown RBP9.59□□□□□ -0.87
SPIDR-224ENST00000524126 PDCD10Q9BUL8 212 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 CPEB1Q9BZB8 566 aaKnown RBP9.59□□□□□ -0.87
SPIDR-224ENST00000524126 AUNIPQ9H7T9 357 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 NLE1Q9NVX2 485 aaPredicted RBP9.59□□□□□ -0.87
SPIDR-224ENST00000524126 TRPS1Q9UHF7 1281 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 OR10H1Q9Y4A9 318 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 CDH23Q9H251 3354 aa9.59□□□□□ -0.87
SPIDR-224ENST00000524126 SMIM28A0A1B0GU29 152 aa9.58□□□□□ -0.88
SPIDR-224ENST00000524126 A8MVJ9 347 aa9.58□□□□□ -0.88
SPIDR-224ENST00000524126 ARPC1BO15143 372 aaKnown RBP9.58□□□□□ -0.88
SPIDR-224ENST00000524126 OR10H3O60404 316 aa9.58□□□□□ -0.88
SPIDR-224ENST00000524126 PRKRAO75569 313 aaKnown RBP9.58□□□□□ -0.88
SPIDR-224ENST00000524126 FGF1P05230 155 aa9.58□□□□□ -0.88
SPIDR-224ENST00000524126 LIMS3P0CW19 117 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms