RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 SLC15A3Q8IY34 581 aa4.76□□□□□ -1.65
PABPC1-223ENST00000523636 CFAP52Q8N1V2 620 aa4.76□□□□□ -1.65
PABPC1-223ENST00000523636 PLD5Q8N7P1 536 aa4.76□□□□□ -1.65
PABPC1-223ENST00000523636 B3GALNT2Q8NCR0 500 aa4.76□□□□□ -1.65
PABPC1-223ENST00000523636 SLC35C1Q96A29 364 aa4.76□□□□□ -1.65
PABPC1-223ENST00000523636 VOPP1Q96AW1 172 aa4.76□□□□□ -1.65
PABPC1-223ENST00000523636 TMA16Q96EY4 203 aaKnown RBP4.76□□□□□ -1.65
PABPC1-223ENST00000523636 MARS2Q96GW9 593 aaKnown RBP4.76□□□□□ -1.65
PABPC1-223ENST00000523636 SNF8Q96H20 258 aa4.76□□□□□ -1.65
PABPC1-223ENST00000523636 ZNF607Q96SK3 696 aa4.76□□□□□ -1.65
PABPC1-223ENST00000523636 VKORC1Q9BQB6 163 aa4.76□□□□□ -1.65
PABPC1-223ENST00000523636 POLDIP3Q9BY77 421 aaKnown RBP4.76□□□□□ -1.65
PABPC1-223ENST00000523636 HRH4Q9H3N8 390 aa4.76□□□□□ -1.65
PABPC1-223ENST00000523636 OSGEPL1Q9H4B0 414 aa4.76□□□□□ -1.65
PABPC1-223ENST00000523636 CSNK1G1Q9HCP0 422 aa4.76□□□□□ -1.65
PABPC1-223ENST00000523636 IL26Q9NPH9 171 aa4.76□□□□□ -1.65
PABPC1-223ENST00000523636 FARSBQ9NSD9 589 aaKnown RBP4.76□□□□□ -1.65
PABPC1-223ENST00000523636 OLAHQ9NV23 265 aa4.76□□□□□ -1.65
PABPC1-223ENST00000523636 DMAC2Q9NW81 257 aa4.76□□□□□ -1.65
PABPC1-223ENST00000523636 TRNAU1APQ9NX07 287 aaKnown RBP4.76□□□□□ -1.65
PABPC1-223ENST00000523636 HAO2Q9NYQ3 351 aa4.76□□□□□ -1.65
PABPC1-223ENST00000523636 KCNE5Q9UJ90 142 aa4.76□□□□□ -1.65
PABPC1-223ENST00000523636 DNAJC12Q9UKB3 198 aa4.76□□□□□ -1.65
PABPC1-223ENST00000523636 NOTCH3Q9UM47 2321 aa4.76□□□□□ -1.65
PABPC1-223ENST00000523636 TFR2Q9UP52 801 aa4.76□□□□□ -1.65
PABPC1-223ENST00000523636 SLC22A14Q9Y267 594 aa4.76□□□□□ -1.65
PABPC1-223ENST00000523636 DRG1Q9Y295 367 aaKnown RBP4.76□□□□□ -1.65
PABPC1-223ENST00000523636 HBS1LQ9Y450 684 aaKnown RBP4.76□□□□□ -1.65
PABPC1-223ENST00000523636 TIMM22Q9Y584 194 aa4.76□□□□□ -1.65
PABPC1-223ENST00000523636 FADS3Q9Y5Q0 445 aa4.76□□□□□ -1.65
PABPC1-223ENST00000523636 TENM2Q9NT68 2774 aa4.76□□□□□ -1.65
PABPC1-223ENST00000523636 SCN2AQ99250 2005 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 DNAJC13O75165 2243 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 IQANK1A0A1B0GTG1 560 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 LOC102723971A0A1B0GUV8 181 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 BTBD17A6NE02 478 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 MARCH11A6NNE9 402 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 C1QTNF3-AMACRE9PGA6 284 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 AGPSO00116 658 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 RNASET2O00584 256 aaKnown RBP4.75□□□□□ -1.65
PABPC1-223ENST00000523636 NDUFAB1O14561 156 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 ADAM10O14672 748 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 ARHGEF9O43307 516 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 PEX1O43933 1283 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 SSX5O60225 188 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 ZNF189O75820 626 aaPredicted RBP4.75□□□□□ -1.65
PABPC1-223ENST00000523636 CLPXO76031 633 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 ZWINTO95229 277 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 TGM6O95932 706 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 GRPP07492 148 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 HOXD4P09016 255 aaPredicted RBP4.75□□□□□ -1.65
PABPC1-223ENST00000523636 SBK2P0C263 348 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 PABPC4LP0CB38 370 aaKnown RBP4.75□□□□□ -1.65
PABPC1-223ENST00000523636 ZCCHC18P0CG32 403 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 CHN1P15882 459 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 CTPS1P17812 591 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 FDXRP22570 491 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 CD1BP29016 333 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 RRM2P31350 389 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 TRIM23P36406 574 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 CPOXP36551 454 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 HSPA9P38646 679 aaKnown RBP4.75□□□□□ -1.65
PABPC1-223ENST00000523636 FMO5P49326 533 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 AIF1P55008 147 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 CLDN8P56748 225 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 SRP54P61011 504 aaKnown RBP4.75□□□□□ -1.65
PABPC1-223ENST00000523636 GNGT1P63211 74 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 OCA2Q04671 838 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 CSTF3Q12996 717 aaKnown RBP4.75□□□□□ -1.65
PABPC1-223ENST00000523636 SNCBQ16143 134 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 KYAT1Q16773 422 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 SYT16Q17RD7 645 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 FAM83EQ2M2I3 478 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 ZNF829Q3KNS6 432 aaPredicted RBP4.75□□□□□ -1.65
PABPC1-223ENST00000523636 HIKESHIQ53FT3 197 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 ZNF789Q5FWF6 425 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 ZNF667Q5HYK9 610 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 Q5PR19 223 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 C6orf136Q5SQH8 315 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 AGBL2Q5U5Z8 902 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 THOC7Q6I9Y2 204 aaKnown RBP4.75□□□□□ -1.65
PABPC1-223ENST00000523636 LCN10Q6JVE6 187 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 TMEM88Q6PEY1 159 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 TTC23LQ6PF05 361 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 LRRC31Q6UY01 552 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 NANOGNBQ7Z5D8 188 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 NRROSQ86YC3 692 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 ZDHHC21Q8IVQ6 265 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 C10orf67Q8IYJ2 551 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 DSELQ8IZU8 1212 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 CCDC63Q8NA47 563 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 FAM46DQ8NEK8 389 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 B4GALNT2Q8NHY0 566 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 IL17DQ8TAD2 202 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 LKAAEAR1Q8TD35 194 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 OR8D1Q8WZ84 308 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 NR4A3Q92570 626 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 RNFT2Q96EX2 444 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 ELMOD3Q96FG2 381 aa4.75□□□□□ -1.65
PABPC1-223ENST00000523636 STAMBPL1Q96FJ0 436 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms