RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 TMEM249Q2WGJ8 235 aa10.42□□□□□ -0.74
SDCBP-211ENST00000523441 CCNYL2Q5T2Q4 361 aa10.42□□□□□ -0.74
SDCBP-211ENST00000523441 STEAP4Q687X5 459 aa10.42□□□□□ -0.74
SDCBP-211ENST00000523441 RAPH1Q70E73 1250 aa10.42□□□□□ -0.74
SDCBP-211ENST00000523441 C17orf47Q8NEP4 570 aa10.42□□□□□ -0.74
SDCBP-211ENST00000523441 TRIM58Q8NG06 486 aa10.42□□□□□ -0.74
SDCBP-211ENST00000523441 S100PBPQ96BU1 408 aa10.42□□□□□ -0.74
SDCBP-211ENST00000523441 KLHL29Q96CT2 875 aa10.42□□□□□ -0.74
SDCBP-211ENST00000523441 TSPAN17Q96FV3 270 aa10.42□□□□□ -0.74
SDCBP-211ENST00000523441 CDK15Q96Q40 435 aa10.42□□□□□ -0.74
SDCBP-211ENST00000523441 TMEM204Q9BSN7 226 aa10.42□□□□□ -0.74
SDCBP-211ENST00000523441 MRPL1Q9BYD6 325 aaKnown RBP10.42□□□□□ -0.74
SDCBP-211ENST00000523441 TRIM31Q9BZY9 425 aa10.42□□□□□ -0.74
SDCBP-211ENST00000523441 DDX47Q9H0S4 455 aaKnown RBP10.42□□□□□ -0.74
SDCBP-211ENST00000523441 POPDC3Q9HBV1 291 aa10.42□□□□□ -0.74
SDCBP-211ENST00000523441 NUDT4Q9NZJ9 180 aa10.42□□□□□ -0.74
SDCBP-211ENST00000523441 TXNDC16Q9P2K2 825 aa10.42□□□□□ -0.74
SDCBP-211ENST00000523441 RNF11Q9Y3C5 154 aa10.42□□□□□ -0.74
SDCBP-211ENST00000523441 TEX264Q9Y6I9 313 aa10.42□□□□□ -0.74
SDCBP-211ENST00000523441 OR2M5A3KFT3 312 aa10.41□□□□□ -0.74
SDCBP-211ENST00000523441 OR6C70A6NIJ9 312 aa10.41□□□□□ -0.74
SDCBP-211ENST00000523441 PGRMC1O00264 195 aaKnown RBP10.41□□□□□ -0.74
SDCBP-211ENST00000523441 ACOX3O15254 700 aa10.41□□□□□ -0.74
SDCBP-211ENST00000523441 TNFRSF21O75509 655 aa10.41□□□□□ -0.74
SDCBP-211ENST00000523441 ALDOAP04075 364 aaKnown RBP10.41□□□□□ -0.74
SDCBP-211ENST00000523441 DANCRP0C864 163 aa10.41□□□□□ -0.74
SDCBP-211ENST00000523441 SRD5A1P18405 259 aa10.41□□□□□ -0.74
SDCBP-211ENST00000523441 PPICP45877 212 aa10.41□□□□□ -0.74
SDCBP-211ENST00000523441 PCYT1AP49585 367 aa10.41□□□□□ -0.74
SDCBP-211ENST00000523441 POU4F1Q01851 419 aa10.41□□□□□ -0.74
SDCBP-211ENST00000523441 MGAT2Q10469 447 aa10.41□□□□□ -0.74
SDCBP-211ENST00000523441 FGFBP1Q14512 234 aa10.41□□□□□ -0.74
SDCBP-211ENST00000523441 TMEM81Q6P7N7 255 aa10.41□□□□□ -0.74
SDCBP-211ENST00000523441 OR4N2Q8NGD1 307 aa10.41□□□□□ -0.74
SDCBP-211ENST00000523441 KAT2AQ92830 837 aa10.41□□□□□ -0.74
SDCBP-211ENST00000523441 GFM2Q969S9 779 aaKnown RBP10.41□□□□□ -0.74
SDCBP-211ENST00000523441 DTNBP1Q96EV8 351 aa10.41□□□□□ -0.74
SDCBP-211ENST00000523441 FLRT3Q9NZU0 649 aa10.41□□□□□ -0.74
SDCBP-211ENST00000523441 ZNF175Q9Y473 711 aa10.41□□□□□ -0.74
SDCBP-211ENST00000523441 PCDHGA11Q9Y5H2 935 aa10.41□□□□□ -0.74
SDCBP-211ENST00000523441 GOLGA6L10A0A0M3HER8 536 aa10.4□□□□□ -0.74
SDCBP-211ENST00000523441 GOLGA6L10A6NI86 522 aa10.4□□□□□ -0.74
SDCBP-211ENST00000523441 CXorf49A8MYA2 514 aaPredicted RBP10.4□□□□□ -0.74
SDCBP-211ENST00000523441 NDUFB5O43674 189 aa10.4□□□□□ -0.74
SDCBP-211ENST00000523441 RAMP1O60894 148 aa10.4□□□□□ -0.74
SDCBP-211ENST00000523441 TMCC2O75069 709 aa10.4□□□□□ -0.74
SDCBP-211ENST00000523441 WISP3O95389 354 aaPredicted RBP10.4□□□□□ -0.74
SDCBP-211ENST00000523441 GFAPP14136 432 aa10.4□□□□□ -0.74
SDCBP-211ENST00000523441 DRD5P21918 477 aa10.4□□□□□ -0.74
SDCBP-211ENST00000523441 EMDP50402 254 aa10.4□□□□□ -0.74
SDCBP-211ENST00000523441 MAPK12P53778 367 aa10.4□□□□□ -0.74
SDCBP-211ENST00000523441 ARL4CP56559 192 aa10.4□□□□□ -0.74
SDCBP-211ENST00000523441 C21orf58P58505 322 aa10.4□□□□□ -0.74
SDCBP-211ENST00000523441 BSPH1Q075Z2 132 aa10.4□□□□□ -0.74
SDCBP-211ENST00000523441 MAP4K2Q12851 820 aa10.4□□□□□ -0.74
SDCBP-211ENST00000523441 DLG1Q12959 904 aa10.4□□□□□ -0.74
SDCBP-211ENST00000523441 PFKFB4Q16877 469 aa10.4□□□□□ -0.74
SDCBP-211ENST00000523441 PGGHGQ32M88 737 aa10.4□□□□□ -0.74
SDCBP-211ENST00000523441 ZNF672Q499Z4 452 aaPredicted RBP10.4□□□□□ -0.74
SDCBP-211ENST00000523441 CDKL4Q5MAI5 379 aa10.4□□□□□ -0.74
SDCBP-211ENST00000523441 FAM219BQ5XKK7 198 aa10.4□□□□□ -0.74
SDCBP-211ENST00000523441 TTC19Q6DKK2 380 aaPredicted RBP10.4□□□□□ -0.74
SDCBP-211ENST00000523441 CLEC2AQ6UVW9 174 aa10.4□□□□□ -0.74
SDCBP-211ENST00000523441 CMC1Q7Z7K0 106 aa10.4□□□□□ -0.74
SDCBP-211ENST00000523441 STK32CQ86UX6 486 aa10.4□□□□□ -0.74
SDCBP-211ENST00000523441 SLC44A2Q8IWA5 706 aaPredicted RBP10.4□□□□□ -0.74
SDCBP-211ENST00000523441 OR2M3Q8NG83 312 aa10.4□□□□□ -0.74
SDCBP-211ENST00000523441 OR6K3Q8NGY3 331 aa10.4□□□□□ -0.74
SDCBP-211ENST00000523441 STAG3L4Q8TBR4 150 aa10.4□□□□□ -0.74
SDCBP-211ENST00000523441 TNFRSF13CQ96RJ3 184 aa10.4□□□□□ -0.74
SDCBP-211ENST00000523441 PLA2G12AQ9BZM1 189 aa10.4□□□□□ -0.74
SDCBP-211ENST00000523441 ESRP2Q9H6T0 727 aaKnown RBP10.4□□□□□ -0.74
SDCBP-211ENST00000523441 PRODH2Q9UF12 536 aa10.4□□□□□ -0.74
SDCBP-211ENST00000523441 VDAC3Q9Y277 283 aa10.4□□□□□ -0.74
SDCBP-211ENST00000523441 OR10H1Q9Y4A9 318 aa10.4□□□□□ -0.74
SDCBP-211ENST00000523441 TSPAN2O60636 221 aa10.39□□□□□ -0.75
SDCBP-211ENST00000523441 ESRRBO95718 433 aa10.39□□□□□ -0.75
SDCBP-211ENST00000523441 FCGR2AP12318 317 aa10.39□□□□□ -0.75
SDCBP-211ENST00000523441 CSNK2A2P19784 350 aaPredicted RBP10.39□□□□□ -0.75
SDCBP-211ENST00000523441 IL32P24001 234 aa10.39□□□□□ -0.75
SDCBP-211ENST00000523441 FNTAP49354 379 aa10.39□□□□□ -0.75
SDCBP-211ENST00000523441 RAB10P61026 200 aa10.39□□□□□ -0.75
SDCBP-211ENST00000523441 IRF9Q00978 393 aa10.39□□□□□ -0.75
SDCBP-211ENST00000523441 CUL3Q13618 768 aa10.39□□□□□ -0.75
SDCBP-211ENST00000523441 EFR3AQ14156 821 aa10.39□□□□□ -0.75
SDCBP-211ENST00000523441 E2F2Q14209 437 aa10.39□□□□□ -0.75
SDCBP-211ENST00000523441 STK11Q15831 433 aa10.39□□□□□ -0.75
SDCBP-211ENST00000523441 NCMAPQ5T1S8 102 aa10.39□□□□□ -0.75
SDCBP-211ENST00000523441 LIPJQ5W064 366 aa10.39□□□□□ -0.75
SDCBP-211ENST00000523441 CYB5R2Q6BCY4 276 aa10.39□□□□□ -0.75
SDCBP-211ENST00000523441 SLC48A1Q6P1K1 146 aa10.39□□□□□ -0.75
SDCBP-211ENST00000523441 NPSR1Q6W5P4 371 aa10.39□□□□□ -0.75
SDCBP-211ENST00000523441 BEND4Q6ZU67 534 aa10.39□□□□□ -0.75
SDCBP-211ENST00000523441 GOLGA7Q7Z5G4 137 aa10.39□□□□□ -0.75
SDCBP-211ENST00000523441 KLHL7Q8IXQ5 586 aa10.39□□□□□ -0.75
SDCBP-211ENST00000523441 ZBED8Q8IZ13 594 aa10.39□□□□□ -0.75
SDCBP-211ENST00000523441 ZNF525Q8N782 197 aa10.39□□□□□ -0.75
SDCBP-211ENST00000523441 OR2W6PQ8NHA6 318 aa10.39□□□□□ -0.75
SDCBP-211ENST00000523441 ATP6V1E2Q96A05 226 aa10.39□□□□□ -0.75
SDCBP-211ENST00000523441 C3orf49Q96BT1 292 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms