RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 FNDC8Q8TC99 324 aa3.81□□□□□ -1.8
SKP1-208ENST00000521216 C11orf24Q96F05 449 aaPredicted RBP3.81□□□□□ -1.8
SKP1-208ENST00000521216 MIEF1Q9NQG6 463 aa3.81□□□□□ -1.8
SKP1-208ENST00000521216 KLRF1Q9NZS2 232 aa3.81□□□□□ -1.8
SKP1-208ENST00000521216 MBD2Q9UBB5 411 aa3.81□□□□□ -1.8
SKP1-208ENST00000521216 CLEC4EQ9ULY5 219 aa3.81□□□□□ -1.8
SKP1-208ENST00000521216 TRBV7-9A0A0J9YWB2 115 aa3.8□□□□□ -1.8
SKP1-208ENST00000521216 RNF103-CHMP3A0A140T963 221 aa3.8□□□□□ -1.8
SKP1-208ENST00000521216 TTC26A0AVF1 554 aa3.8□□□□□ -1.8
SKP1-208ENST00000521216 KRT87PA6NCN2 255 aa3.8□□□□□ -1.8
SKP1-208ENST00000521216 H0YL77 283 aa3.8□□□□□ -1.8
SKP1-208ENST00000521216 LGALS8O00214 317 aa3.8□□□□□ -1.8
SKP1-208ENST00000521216 IMPA2O14732 288 aa3.8□□□□□ -1.8
SKP1-208ENST00000521216 SLC2A10O95528 541 aa3.8□□□□□ -1.8
SKP1-208ENST00000521216 TGFAP01135 160 aa3.8□□□□□ -1.8
SKP1-208ENST00000521216 IGFBP1P08833 259 aaPredicted RBP3.8□□□□□ -1.8
SKP1-208ENST00000521216 GIG44P09565 113 aaPredicted RBP3.8□□□□□ -1.8
SKP1-208ENST00000521216 GSTT2P0CG29 244 aa3.8□□□□□ -1.8
SKP1-208ENST00000521216 GSTT2BP0CG30 244 aa3.8□□□□□ -1.8
SKP1-208ENST00000521216 SDC1P18827 310 aa3.8□□□□□ -1.8
SKP1-208ENST00000521216 PRKAR2BP31323 418 aa3.8□□□□□ -1.8
SKP1-208ENST00000521216 IL2RGP31785 369 aa3.8□□□□□ -1.8
SKP1-208ENST00000521216 HTR5AP47898 357 aa3.8□□□□□ -1.8
SKP1-208ENST00000521216 IRX3P78415 501 aaPredicted RBP3.8□□□□□ -1.8
SKP1-208ENST00000521216 MRPS6P82932 125 aaKnown RBP3.8□□□□□ -1.8
SKP1-208ENST00000521216 PRKCEQ02156 737 aa3.8□□□□□ -1.8
SKP1-208ENST00000521216 GABPB1Q06547 395 aaPredicted RBP3.8□□□□□ -1.8
SKP1-208ENST00000521216 PUDPQ08623 228 aa3.8□□□□□ -1.8
SKP1-208ENST00000521216 CD47Q08722 323 aa3.8□□□□□ -1.8
SKP1-208ENST00000521216 GAMTQ14353 236 aa3.8□□□□□ -1.8
SKP1-208ENST00000521216 KARSQ15046 597 aaKnown RBP3.8□□□□□ -1.8
SKP1-208ENST00000521216 PAN3Q58A45 887 aaKnown RBP3.8□□□□□ -1.8
SKP1-208ENST00000521216 MEDAGQ5VYS4 303 aa3.8□□□□□ -1.8
SKP1-208ENST00000521216 CASC1Q6TDU7 716 aa3.8□□□□□ -1.8
SKP1-208ENST00000521216 FAM43BQ6ZT52 329 aaPredicted RBP3.8□□□□□ -1.8
SKP1-208ENST00000521216 Q7L0L9 218 aa3.8□□□□□ -1.8
SKP1-208ENST00000521216 SH2D6Q7Z4S9 175 aa3.8□□□□□ -1.8
SKP1-208ENST00000521216 ZNF525Q8N782 197 aa3.8□□□□□ -1.8
SKP1-208ENST00000521216 ART4Q93070 314 aa3.8□□□□□ -1.8
SKP1-208ENST00000521216 HCAR1Q9BXC0 346 aa3.8□□□□□ -1.8
SKP1-208ENST00000521216 ELOVL4Q9GZR5 314 aa3.8□□□□□ -1.8
SKP1-208ENST00000521216 IGHV3-35A0A0C4DH35 117 aa3.79□□□□□ -1.8
SKP1-208ENST00000521216 FRG2CA6NGY1 282 aa3.79□□□□□ -1.8
SKP1-208ENST00000521216 NOL4O94818 638 aa3.79□□□□□ -1.8
SKP1-208ENST00000521216 TOXO94900 526 aa3.79□□□□□ -1.8
SKP1-208ENST00000521216 CT45A10P0DMU9 189 aa3.79□□□□□ -1.8
SKP1-208ENST00000521216 PTBP1P26599 531 aaKnown RBP eCLIP3.79□□□□□ -1.8
SKP1-208ENST00000521216 XCR1P46094 333 aa3.79□□□□□ -1.8
SKP1-208ENST00000521216 OR1D4P47884 311 aa3.79□□□□□ -1.8
SKP1-208ENST00000521216 ALDH3B2P48448 385 aa3.79□□□□□ -1.8
SKP1-208ENST00000521216 PKN2Q16513 984 aaKnown RBP3.79□□□□□ -1.8
SKP1-208ENST00000521216 ZSWIM7Q19AV6 140 aa3.79□□□□□ -1.8
SKP1-208ENST00000521216 LGSNQ5TDP6 509 aa3.79□□□□□ -1.8
SKP1-208ENST00000521216 DMKNQ6E0U4 476 aaPredicted RBP3.79□□□□□ -1.8
SKP1-208ENST00000521216 HACD2Q6Y1H2 254 aa3.79□□□□□ -1.8
SKP1-208ENST00000521216 PARGQ86W56 976 aa3.79□□□□□ -1.8
SKP1-208ENST00000521216 C11orf42Q8N5U0 333 aa3.79□□□□□ -1.8
SKP1-208ENST00000521216 MAPKAP1Q9BPZ7 522 aa3.79□□□□□ -1.8
SKP1-208ENST00000521216 RAB17Q9H0T7 212 aa3.79□□□□□ -1.8
SKP1-208ENST00000521216 ELOVL2Q9NXB9 296 aa3.79□□□□□ -1.8
SKP1-208ENST00000521216 ADAMTS9Q9P2N4 1935 aa3.79□□□□□ -1.8
SKP1-208ENST00000521216 GRIN2DO15399 1336 aa3.78□□□□□ -1.8
SKP1-208ENST00000521216 KLF18A0A0U1RQI7 1052 aa3.78□□□□□ -1.8
SKP1-208ENST00000521216 KLLNB2CW77 178 aa3.78□□□□□ -1.8
SKP1-208ENST00000521216 TNFSF11O14788 317 aa3.78□□□□□ -1.8
SKP1-208ENST00000521216 CASKO14936 926 aa3.78□□□□□ -1.8
SKP1-208ENST00000521216 SEC22BO75396 215 aa3.78□□□□□ -1.8
SKP1-208ENST00000521216 LY6G6DO95868 133 aa3.78□□□□□ -1.8
SKP1-208ENST00000521216 GAP43P17677 238 aa3.78□□□□□ -1.8
SKP1-208ENST00000521216 ZBTB25P24278 435 aa3.78□□□□□ -1.8
SKP1-208ENST00000521216 PTPN6P29350 595 aa3.78□□□□□ -1.8
SKP1-208ENST00000521216 RABIFP47224 123 aa3.78□□□□□ -1.8
SKP1-208ENST00000521216 MEOX2P50222 304 aa3.78□□□□□ -1.8
SKP1-208ENST00000521216 ATXN3P54252 364 aaPredicted RBP3.78□□□□□ -1.8
SKP1-208ENST00000521216 STARD6P59095 220 aa3.78□□□□□ -1.8
SKP1-208ENST00000521216 RPS6P62753 249 aaKnown RBP3.78□□□□□ -1.8
SKP1-208ENST00000521216 ZP4Q12836 540 aa3.78□□□□□ -1.8
SKP1-208ENST00000521216 PDIA5Q14554 519 aa3.78□□□□□ -1.8
SKP1-208ENST00000521216 UBE2V2Q15819 145 aa3.78□□□□□ -1.8
SKP1-208ENST00000521216 PRR30Q53SZ7 412 aaPredicted RBP3.78□□□□□ -1.8
SKP1-208ENST00000521216 SLC22A10Q63ZE4 541 aa3.78□□□□□ -1.8
SKP1-208ENST00000521216 ZNF562Q6V9R5 426 aa3.78□□□□□ -1.8
SKP1-208ENST00000521216 PAQR9Q6ZVX9 377 aa3.78□□□□□ -1.8
SKP1-208ENST00000521216 NET1Q7Z628 596 aaPredicted RBP3.78□□□□□ -1.8
SKP1-208ENST00000521216 CCDC36Q8IYA8 594 aa3.78□□□□□ -1.8
SKP1-208ENST00000521216 RNF148Q8N7C7 305 aa3.78□□□□□ -1.8
SKP1-208ENST00000521216 OR56B1Q8NGI3 324 aa3.78□□□□□ -1.8
SKP1-208ENST00000521216 BADQ92934 168 aa3.78□□□□□ -1.8
SKP1-208ENST00000521216 NCLNQ969V3 563 aa3.78□□□□□ -1.8
SKP1-208ENST00000521216 ELMO2Q96JJ3 720 aa3.78□□□□□ -1.8
SKP1-208ENST00000521216 SAMD8Q96LT4 415 aa3.78□□□□□ -1.8
SKP1-208ENST00000521216 FAM111AQ96PZ2 611 aa3.78□□□□□ -1.8
SKP1-208ENST00000521216 PAXXQ9BUH6 204 aa3.78□□□□□ -1.8
SKP1-208ENST00000521216 NMNAT2Q9BZQ4 307 aa3.78□□□□□ -1.8
SKP1-208ENST00000521216 IKZF5Q9H5V7 419 aa3.78□□□□□ -1.8
SKP1-208ENST00000521216 KAT8Q9H7Z6 458 aaKnown RBP3.78□□□□□ -1.8
SKP1-208ENST00000521216 ROPN1Q9HAT0 212 aaPredicted RBP3.78□□□□□ -1.8
SKP1-208ENST00000521216 EXOSC3Q9NQT5 275 aaKnown RBP3.78□□□□□ -1.8
SKP1-208ENST00000521216 YAE1D1Q9NRH1 226 aa3.78□□□□□ -1.8
SKP1-208ENST00000521216 C1orf123Q9NWV4 160 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms