RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 CD97P48960 835 aa14.14□□□□□ -0.15
LSM1-203ENST00000520755 PRIM2P49643 509 aa14.14□□□□□ -0.15
LSM1-203ENST00000520755 KHKP50053 298 aa14.14□□□□□ -0.15
LSM1-203ENST00000520755 FADDQ13158 208 aa14.14□□□□□ -0.15
LSM1-203ENST00000520755 ADRM1Q16186 407 aa14.14□□□□□ -0.15
LSM1-203ENST00000520755 ZCCHC12Q6PEW1 402 aa14.14□□□□□ -0.15
LSM1-203ENST00000520755 BHLHB9Q6PI77 547 aa14.14□□□□□ -0.15
LSM1-203ENST00000520755 IGFL2Q6UWQ7 119 aa14.14□□□□□ -0.15
LSM1-203ENST00000520755 ASRGL1Q7L266 308 aa14.14□□□□□ -0.15
LSM1-203ENST00000520755 NET1Q7Z628 596 aaPredicted RBP14.14□□□□□ -0.15
LSM1-203ENST00000520755 YTHDF3Q7Z739 585 aaKnown RBP14.14□□□□□ -0.15
LSM1-203ENST00000520755 PTOV1Q86YD1 416 aa14.14□□□□□ -0.15
LSM1-203ENST00000520755 ZADH2Q8N4Q0 377 aa14.14□□□□□ -0.15
LSM1-203ENST00000520755 OR4N2Q8NGD1 307 aa14.14□□□□□ -0.15
LSM1-203ENST00000520755 JADE3Q92613 823 aa14.14□□□□□ -0.15
LSM1-203ENST00000520755 CDS1Q92903 461 aa14.14□□□□□ -0.15
LSM1-203ENST00000520755 RAB8BQ92930 207 aa14.14□□□□□ -0.15
LSM1-203ENST00000520755 SLC35A4Q96G79 324 aa14.14□□□□□ -0.15
LSM1-203ENST00000520755 BTBD10Q9BSF8 475 aa14.14□□□□□ -0.15
LSM1-203ENST00000520755 THUMPD3Q9BV44 507 aaKnown RBP14.14□□□□□ -0.15
LSM1-203ENST00000520755 MFRPQ9BY79 579 aa14.14□□□□□ -0.15
LSM1-203ENST00000520755 SPAG4Q9NPE6 437 aa14.14□□□□□ -0.15
LSM1-203ENST00000520755 NDE1Q9NXR1 346 aa14.14□□□□□ -0.15
LSM1-203ENST00000520755 GPR55Q9Y2T6 319 aaPredicted RBP14.14□□□□□ -0.15
LSM1-203ENST00000520755 CSAG2Q9Y5P2 127 aa14.14□□□□□ -0.15
LSM1-203ENST00000520755 GXYLT2A0PJZ3 443 aa14.13□□□□□ -0.15
LSM1-203ENST00000520755 PRORSD1PA6NEY8 169 aa14.13□□□□□ -0.15
LSM1-203ENST00000520755 ASNA1O43681 348 aa14.13□□□□□ -0.15
LSM1-203ENST00000520755 DPM1O60762 260 aa14.13□□□□□ -0.15
LSM1-203ENST00000520755 ATP5HO75947 161 aa14.13□□□□□ -0.15
LSM1-203ENST00000520755 ZIC2O95409 532 aaPredicted RBP14.13□□□□□ -0.15
LSM1-203ENST00000520755 OR12D1P0DN82 309 aa14.13□□□□□ -0.15
LSM1-203ENST00000520755 CRATP43155 626 aa14.13□□□□□ -0.15
LSM1-203ENST00000520755 GSK3BP49841 420 aa14.13□□□□□ -0.15
LSM1-203ENST00000520755 SSR4P51571 173 aa14.13□□□□□ -0.15
LSM1-203ENST00000520755 NR0B1P51843 470 aaKnown RBP14.13□□□□□ -0.15
LSM1-203ENST00000520755 DSTNP60981 165 aa14.13□□□□□ -0.15
LSM1-203ENST00000520755 OC90Q02509 493 aaPredicted RBP14.13□□□□□ -0.15
LSM1-203ENST00000520755 CEACAM7Q14002 265 aa14.13□□□□□ -0.15
LSM1-203ENST00000520755 IGFL3Q6UXB1 125 aa14.13□□□□□ -0.15
LSM1-203ENST00000520755 BNC2Q6ZN30 1099 aaPredicted RBP14.13□□□□□ -0.15
LSM1-203ENST00000520755 OLIG3Q7RTU3 272 aa14.13□□□□□ -0.15
LSM1-203ENST00000520755 PTRH1Q86Y79 214 aaKnown RBP14.13□□□□□ -0.15
LSM1-203ENST00000520755 ZZZ3Q8IYH5 903 aa14.13□□□□□ -0.15
LSM1-203ENST00000520755 ARMC10Q8N2F6 343 aa14.13□□□□□ -0.15
LSM1-203ENST00000520755 TMEM156Q8N614 296 aa14.13□□□□□ -0.15
LSM1-203ENST00000520755 OR10A6Q8NH74 314 aa14.13□□□□□ -0.15
LSM1-203ENST00000520755 PIK3R3Q92569 461 aa14.13□□□□□ -0.15
LSM1-203ENST00000520755 SLC9A6Q92581 669 aa14.13□□□□□ -0.15
LSM1-203ENST00000520755 ZNF583Q96ND8 569 aa14.13□□□□□ -0.15
LSM1-203ENST00000520755 BBC3Q96PG8 261 aaPredicted RBP14.13□□□□□ -0.15
LSM1-203ENST00000520755 RASL10BQ96S79 203 aa14.13□□□□□ -0.15
LSM1-203ENST00000520755 STACQ99469 402 aa14.13□□□□□ -0.15
LSM1-203ENST00000520755 UTP23Q9BRU9 249 aaKnown RBP14.13□□□□□ -0.15
LSM1-203ENST00000520755 PIGUQ9H490 435 aa14.13□□□□□ -0.15
LSM1-203ENST00000520755 RAD21L1Q9H4I0 556 aa14.13□□□□□ -0.15
LSM1-203ENST00000520755 DUSP22Q9NRW4 184 aa14.13□□□□□ -0.15
LSM1-203ENST00000520755 RALYQ9UKM9 306 aaKnown RBP14.13□□□□□ -0.15
LSM1-203ENST00000520755 FAF1Q9UNN5 650 aaPredicted RBP14.13□□□□□ -0.15
LSM1-203ENST00000520755 CORO2BQ9UQ03 480 aa14.13□□□□□ -0.15
LSM1-203ENST00000520755 YARS2Q9Y2Z4 477 aaKnown RBP14.13□□□□□ -0.15
LSM1-203ENST00000520755 PIEZO2Q9H5I5 2752 aa14.12□□□□□ -0.15
LSM1-203ENST00000520755 BOD1L1Q8NFC6 3051 aa14.12□□□□□ -0.15
LSM1-203ENST00000520755 OR5H15A6NDH6 313 aa14.12□□□□□ -0.15
LSM1-203ENST00000520755 ERICH4A6NGS2 130 aa14.12□□□□□ -0.15
LSM1-203ENST00000520755 FRG2CA6NGY1 282 aa14.12□□□□□ -0.15
LSM1-203ENST00000520755 EVPLLA8MZ36 301 aa14.12□□□□□ -0.15
LSM1-203ENST00000520755 FAM220BPB1ANY3 271 aa14.12□□□□□ -0.15
LSM1-203ENST00000520755 RRP9O43818 475 aaKnown RBP14.12□□□□□ -0.15
LSM1-203ENST00000520755 SORBS2O94875 1100 aaKnown RBP14.12□□□□□ -0.15
LSM1-203ENST00000520755 IGKV1D-16P01601 117 aa14.12□□□□□ -0.15
LSM1-203ENST00000520755 ALOX5P09917 674 aa14.12□□□□□ -0.15
LSM1-203ENST00000520755 ARAFP10398 606 aa14.12□□□□□ -0.15
LSM1-203ENST00000520755 CASRP41180 1078 aa14.12□□□□□ -0.15
LSM1-203ENST00000520755 MAGEA8P43361 318 aa14.12□□□□□ -0.15
LSM1-203ENST00000520755 PPICP45877 212 aa14.12□□□□□ -0.15
LSM1-203ENST00000520755 EEFSECP57772 596 aaKnown RBP14.12□□□□□ -0.15
LSM1-203ENST00000520755 LIPEQ05469 1076 aa14.12□□□□□ -0.15
LSM1-203ENST00000520755 TUBA3CQ13748 450 aa14.12□□□□□ -0.15
LSM1-203ENST00000520755 DNAL1Q4LDG9 190 aa14.12□□□□□ -0.15
LSM1-203ENST00000520755 PIGGQ5H8A4 983 aa14.12□□□□□ -0.15
LSM1-203ENST00000520755 COLEC12Q5KU26 742 aa14.12□□□□□ -0.15
LSM1-203ENST00000520755 GCNT6Q5T4J0 391 aa14.12□□□□□ -0.15
LSM1-203ENST00000520755 ZNF468Q5VIY5 522 aaPredicted RBP14.12□□□□□ -0.15
LSM1-203ENST00000520755 HEPHL1Q6MZM0 1159 aa14.12□□□□□ -0.15
LSM1-203ENST00000520755 TUBA3EQ6PEY2 450 aa14.12□□□□□ -0.15
LSM1-203ENST00000520755 SERPINA11Q86U17 422 aa14.12□□□□□ -0.15
LSM1-203ENST00000520755 HPS6Q86YV9 775 aa14.12□□□□□ -0.15
LSM1-203ENST00000520755 RNF148Q8N7C7 305 aa14.12□□□□□ -0.15
LSM1-203ENST00000520755 RBMXL3Q8N7X1 1067 aaKnown RBP14.12□□□□□ -0.15
LSM1-203ENST00000520755 CATSPER1Q8NEC5 780 aa14.12□□□□□ -0.15
LSM1-203ENST00000520755 C17orf47Q8NEP4 570 aa14.12□□□□□ -0.15
LSM1-203ENST00000520755 SLC22A8Q8TCC7 542 aa14.12□□□□□ -0.15
LSM1-203ENST00000520755 ASB15Q8WXK1 588 aa14.12□□□□□ -0.15
LSM1-203ENST00000520755 SLC39A7Q92504 469 aa14.12□□□□□ -0.15
LSM1-203ENST00000520755 MAL2Q969L2 176 aa14.12□□□□□ -0.15
LSM1-203ENST00000520755 LCORQ96JN0 433 aaPredicted RBP14.12□□□□□ -0.15
LSM1-203ENST00000520755 CLPTM1LQ96KA5 538 aa14.12□□□□□ -0.15
LSM1-203ENST00000520755 CDRT15Q96T59 188 aa14.12□□□□□ -0.15
LSM1-203ENST00000520755 CADM1Q9BY67 442 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms