RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 MASP1P48740 699 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 RGS6P49758 472 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 COX10Q12887 443 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 BMP8AQ7Z5Y6 402 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 OR4N4Q8N0Y3 316 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 UBASH3BQ8TF42 649 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 PRRC1Q96M27 445 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 PINK1Q9BXM7 581 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 OR8D2Q9GZM6 311 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 MMP27Q9H306 513 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 DSN1Q9H410 356 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 NT5DC2Q9H857 520 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 MAU2Q9Y6X3 613 aa9.54□□□□□ -0.88
MCF2-209ENST00000520602 SPTBP11277 2137 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 A0A1W2PS29 197 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 A8MVJ9 347 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 RAB36O95755 333 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 MRPL3P09001 348 aaKnown RBP9.53□□□□□ -0.88
MCF2-209ENST00000520602 CBLP22681 906 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 RORCP51449 518 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 AQP6Q13520 282 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 LRIT3Q3SXY7 679 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 B3GLCTQ6Y288 498 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 RTL4Q6ZR62 310 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 ALDH16A1Q8IZ83 802 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 SLC37A2Q8TED4 501 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 SAMD8Q96LT4 415 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 PRTFDC1Q9NRG1 225 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 NTNG1Q9Y2I2 539 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 KCNE3Q9Y6H6 103 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 HTTP42858 3142 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 CCDC88CQ9P219 2028 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 FAM183AA6NL82 134 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 CLDN24A6NM45 220 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 ASNA1O43681 348 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 WBP4O75554 376 aaKnown RBP9.53□□□□□ -0.88
MCF2-209ENST00000520602 KLHL18O94889 574 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 IFNGP01579 166 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 CHRM4P08173 479 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 CPMP14384 443 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 VASPP50552 380 aaPredicted RBP9.53□□□□□ -0.88
MCF2-209ENST00000520602 PDX1P52945 283 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 RPL6Q02878 288 aaKnown RBP9.53□□□□□ -0.88
MCF2-209ENST00000520602 TBCEQ15813 527 aaPredicted RBP9.53□□□□□ -0.88
MCF2-209ENST00000520602 ALG11Q2TAA5 492 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 TRMT12Q53H54 448 aaKnown RBP9.53□□□□□ -0.88
MCF2-209ENST00000520602 ENTPD8Q5MY95 495 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 SYT6Q5T7P8 510 aaPredicted RBP9.53□□□□□ -0.88
MCF2-209ENST00000520602 PRPF38BQ5VTL8 546 aaKnown RBP9.53□□□□□ -0.88
MCF2-209ENST00000520602 MEDAGQ5VYS4 303 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 FAAH2Q6GMR7 532 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 C22orf42Q6IC83 251 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 FCRL1Q96LA6 429 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 SECISBP2Q96T21 854 aaKnown RBP9.53□□□□□ -0.88
MCF2-209ENST00000520602 DPH1Q9BZG8 443 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 SAP130Q9H0E3 1048 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 Q9N2J8 555 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 MRPS17Q9Y2R5 130 aaKnown RBP9.53□□□□□ -0.88
MCF2-209ENST00000520602 CLCA3PQ9Y6N3 262 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 EPOPA6NHQ4 379 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 SAGE2PA6NJ88 616 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 BOLA2-SMG1P6H3BVE0 249 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 REM1O75628 298 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 EML2O95834 649 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 HIST1H2ABP04908 130 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 MTNR1AP48039 350 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 MAZP56270 477 aaKnown RBP9.53□□□□□ -0.88
MCF2-209ENST00000520602 ZNF91Q05481 1191 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 BIKQ13323 160 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 PUM1Q14671 1186 aaKnown RBP eCLIP9.53□□□□□ -0.88
MCF2-209ENST00000520602 PUS10Q3MIT2 529 aaKnown RBP9.53□□□□□ -0.88
MCF2-209ENST00000520602 HIST3H2AQ7L7L0 130 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 OR2T33Q8NG76 320 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 OR6K6Q8NGW6 343 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 ENKURQ8TC29 256 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 HIST1H2ACQ93077 130 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 PTCHD1Q96NR3 888 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 RNF167Q9H6Y7 350 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 C14orf119Q9NWQ9 140 aa9.53□□□□□ -0.88
MCF2-209ENST00000520602 ZNF624Q9P2J8 865 aaPredicted RBP9.53□□□□□ -0.88
MCF2-209ENST00000520602 CASC3O15234 703 aaKnown RBP9.52□□□□□ -0.88
MCF2-209ENST00000520602 HLA-DQA2P01906 255 aa9.52□□□□□ -0.88
MCF2-209ENST00000520602 MMP11P24347 488 aa9.52□□□□□ -0.88
MCF2-209ENST00000520602 TNFRSF17Q02223 184 aa9.52□□□□□ -0.88
MCF2-209ENST00000520602 TFF2Q03403 129 aa9.52□□□□□ -0.88
MCF2-209ENST00000520602 ELOCQ15369 112 aa9.52□□□□□ -0.88
MCF2-209ENST00000520602 SEC23BQ15437 767 aa9.52□□□□□ -0.88
MCF2-209ENST00000520602 PRSS53Q2L4Q9 553 aa9.52□□□□□ -0.88
MCF2-209ENST00000520602 FCRLBQ6BAA4 426 aa9.52□□□□□ -0.88
MCF2-209ENST00000520602 PGBD2Q6P3X8 592 aa9.52□□□□□ -0.88
MCF2-209ENST00000520602 ARL9Q6T311 187 aa9.52□□□□□ -0.88
MCF2-209ENST00000520602 LACC1Q8IV20 430 aa9.52□□□□□ -0.88
MCF2-209ENST00000520602 LRRC56Q8IYG6 542 aaPredicted RBP9.52□□□□□ -0.88
MCF2-209ENST00000520602 RIT1Q92963 219 aa9.52□□□□□ -0.88
MCF2-209ENST00000520602 TBC1D20Q96BZ9 403 aa9.52□□□□□ -0.88
MCF2-209ENST00000520602 KCTD7Q96MP8 289 aa9.52□□□□□ -0.88
MCF2-209ENST00000520602 DPYSL5Q9BPU6 564 aa9.52□□□□□ -0.88
MCF2-209ENST00000520602 CENPOQ9BU64 300 aa9.52□□□□□ -0.88
MCF2-209ENST00000520602 RACGAP1Q9H0H5 632 aa9.52□□□□□ -0.88
MCF2-209ENST00000520602 PRDM7Q9NQW5 492 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms