RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-208ENST00000520580 STX11O75558 287 aa3.15□□□□□ -1.91
SREK1-208ENST00000520580 TRMUO75648 421 aaKnown RBP3.15□□□□□ -1.91
SREK1-208ENST00000520580 CDC123O75794 336 aaPredicted RBP3.15□□□□□ -1.91
SREK1-208ENST00000520580 TROVE2P10155 538 aaKnown RBP eCLIP3.15□□□□□ -1.913e-14■■□□□ 13.6
SREK1-208ENST00000520580 ETS2P15036 469 aa3.15□□□□□ -1.91
SREK1-208ENST00000520580 XRCC1P18887 633 aaPredicted RBP3.15□□□□□ -1.91
SREK1-208ENST00000520580 PPP2R1BP30154 601 aa3.15□□□□□ -1.91
SREK1-208ENST00000520580 CASP4P49662 377 aa3.15□□□□□ -1.91
SREK1-208ENST00000520580 CDKL1Q00532 357 aa3.15□□□□□ -1.91
SREK1-208ENST00000520580 OC90Q02509 493 aaPredicted RBP3.15□□□□□ -1.91
SREK1-208ENST00000520580 SRSF9Q13242 221 aaKnown RBP eCLIP3.15□□□□□ -1.91
SREK1-208ENST00000520580 ITPK1Q13572 414 aa3.15□□□□□ -1.91
SREK1-208ENST00000520580 C1orf189Q5VU69 101 aa3.15□□□□□ -1.91
SREK1-208ENST00000520580 BHLHB9Q6PI77 547 aa3.15□□□□□ -1.91
SREK1-208ENST00000520580 OTUD6AQ7L8S5 288 aa3.15□□□□□ -1.91
SREK1-208ENST00000520580 GPR142Q7Z601 462 aa3.15□□□□□ -1.91
SREK1-208ENST00000520580 TMEM17Q86X19 198 aa3.15□□□□□ -1.91
SREK1-208ENST00000520580 SLC22A15Q8IZD6 547 aa3.15□□□□□ -1.91
SREK1-208ENST00000520580 SDR9C7Q8NEX9 313 aa3.15□□□□□ -1.91
SREK1-208ENST00000520580 SPATA4Q8NEY3 305 aa3.15□□□□□ -1.91
SREK1-208ENST00000520580 OR51G2Q8NGK0 314 aa3.15□□□□□ -1.91
SREK1-208ENST00000520580 FAM110BQ8TC76 370 aa3.15□□□□□ -1.91
SREK1-208ENST00000520580 FBXO25Q8TCJ0 367 aa3.15□□□□□ -1.91
SREK1-208ENST00000520580 IFT74Q96LB3 600 aa3.15□□□□□ -1.91
SREK1-208ENST00000520580 C12orf66Q96MD2 445 aa3.15□□□□□ -1.91
SREK1-208ENST00000520580 SIKE1Q9BRV8 207 aa3.15□□□□□ -1.91
SREK1-208ENST00000520580 LRRN3Q9H3W5 708 aa3.15□□□□□ -1.91
SREK1-208ENST00000520580 GEMIN7Q9H840 131 aaKnown RBP3.15□□□□□ -1.91
SREK1-208ENST00000520580 CYP3A43Q9HB55 503 aa3.15□□□□□ -1.91
SREK1-208ENST00000520580 MCCC2Q9HCC0 563 aa3.15□□□□□ -1.91
SREK1-208ENST00000520580 ZNF160Q9HCG1 818 aa3.15□□□□□ -1.91
SREK1-208ENST00000520580 MAN2C1Q9NTJ4 1040 aa3.15□□□□□ -1.91
SREK1-208ENST00000520580 PTTG3PQ9NZH4 202 aa3.15□□□□□ -1.91
SREK1-208ENST00000520580 TUBGCP4Q9UGJ1 667 aa3.15□□□□□ -1.91
SREK1-208ENST00000520580 ERRFI1Q9UJM3 462 aaPredicted RBP3.15□□□□□ -1.91
SREK1-208ENST00000520580 TNIKQ9UKE5 1360 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 ZNF804BA4D1E1 1349 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 WDR91A4D1P6 747 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 TCP11X1B4DZS4 312 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 SUPT3HB4E1H0 165 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 M0QX08 132 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 CYB561D2O14569 222 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 EI24O14681 340 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 N4BP1O75113 896 aaKnown RBP3.14□□□□□ -1.91
SREK1-208ENST00000520580 SCGNO76038 276 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 B3GAT3O94766 335 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 FGF3P11487 239 aaPredicted RBP3.14□□□□□ -1.91
SREK1-208ENST00000520580 KCNJ4P48050 445 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 SLC11A1P49279 550 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 POU3F4P49335 361 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 ETV1P50549 477 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 HAND2P61296 217 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 CSNK2BP67870 215 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 RGS1Q08116 209 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 AADACL4Q5VUY2 407 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 RANBP3LQ86VV4 465 aaPredicted RBP3.14□□□□□ -1.91
SREK1-208ENST00000520580 SPATA2LQ8IUW3 424 aaPredicted RBP3.14□□□□□ -1.91
SREK1-208ENST00000520580 KATNAL2Q8IYT4 538 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 NAGSQ8N159 534 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 TMEM178AQ8NBL3 297 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 DNAJA4Q8WW22 397 aaPredicted RBP3.14□□□□□ -1.91
SREK1-208ENST00000520580 RPL36ALQ969Q0 106 aaKnown RBP3.14□□□□□ -1.91
SREK1-208ENST00000520580 MYLPFQ96A32 169 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 TIMD4Q96H15 378 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 C12orf42Q96LP6 360 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 LURAP1Q96LR2 239 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 IL17FQ96PD4 163 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 SLC38A2Q96QD8 506 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 COPS8Q99627 209 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 NKX3-1Q99801 234 aaPredicted RBP3.14□□□□□ -1.91
SREK1-208ENST00000520580 TDRD1Q9BXT4 1180 aaKnown RBP3.14□□□□□ -1.91
SREK1-208ENST00000520580 KLHL28Q9NXS3 571 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 SLC2A8Q9NY64 477 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 SLC7A8Q9UHI5 535 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 ZNF639Q9UID6 485 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 COX11Q9Y6N1 276 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 A0A1B0GTQ1 180 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 LRIT2A6NDA9 550 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 FBLL1A6NHQ2 334 aaKnown RBP3.14□□□□□ -1.91
SREK1-208ENST00000520580 PRAC2D3DTV9 90 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 SPECC1L-ADORA2AF8WAN1 911 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 TSPAN12O95859 305 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 TOMM40O96008 361 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 POU2F1P14859 743 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 HLCSP50747 726 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 NOVA1P51513 510 aaKnown RBP3.14□□□□□ -1.91
SREK1-208ENST00000520580 CDH4P55283 916 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 DPTQ07507 201 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 BNIP1Q12981 228 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 IL18Q14116 193 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 ATXN7L3Q14CW9 347 aaPredicted RBP3.14□□□□□ -1.91
SREK1-208ENST00000520580 GTDC1Q4AE62 458 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 CAPRIN2Q6IMN6 1127 aaKnown RBP3.14□□□□□ -1.91
SREK1-208ENST00000520580 SCYL2Q6P3W7 929 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 RBMS3Q6XE24 437 aaKnown RBP3.14□□□□□ -1.91
SREK1-208ENST00000520580 HACD2Q6Y1H2 254 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 ADAMTSL5Q6ZMM2 481 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 NLRP9Q7RTR0 991 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 PRSS48Q7RTY5 328 aa3.14□□□□□ -1.91
SREK1-208ENST00000520580 OR4N5Q8IXE1 308 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms