RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-222ENST00000520400 TUBGCP4Q9UGJ1 667 aa3.53□□□□□ -1.84
CTNNA1-222ENST00000520400 PLEKHA6Q9Y2H5 1048 aa3.53□□□□□ -1.84
CTNNA1-222ENST00000520400 ANKRD30BQ9BXX2 1392 aa3.52□□□□□ -1.85
CTNNA1-222ENST00000520400 ZNF840PA6NDX5 716 aa3.52□□□□□ -1.85
CTNNA1-222ENST00000520400 RNF212BA8MTL3 300 aa3.52□□□□□ -1.85
CTNNA1-222ENST00000520400 SAP18O00422 153 aaKnown RBP3.52□□□□□ -1.85
CTNNA1-222ENST00000520400 IMPA2O14732 288 aa3.52□□□□□ -1.85
CTNNA1-222ENST00000520400 STK17BO94768 372 aa3.52□□□□□ -1.85
CTNNA1-222ENST00000520400 MT-ND1P03886 318 aa3.52□□□□□ -1.85
CTNNA1-222ENST00000520400 FCGR3AP08637 254 aa3.52□□□□□ -1.85
CTNNA1-222ENST00000520400 WNT2P09544 360 aa3.52□□□□□ -1.85
CTNNA1-222ENST00000520400 CCNA2P20248 432 aa3.52□□□□□ -1.85
CTNNA1-222ENST00000520400 PRDX2P32119 198 aa3.52□□□□□ -1.85
CTNNA1-222ENST00000520400 SPRP35270 261 aaPredicted RBP3.52□□□□□ -1.85
CTNNA1-222ENST00000520400 SAA4P35542 130 aa3.52□□□□□ -1.85
CTNNA1-222ENST00000520400 CD86P42081 329 aa3.52□□□□□ -1.85
CTNNA1-222ENST00000520400 SLC6A8P48029 635 aa3.52□□□□□ -1.85
CTNNA1-222ENST00000520400 BTG3Q14201 252 aaPredicted RBP3.52□□□□□ -1.85
CTNNA1-222ENST00000520400 RFTN1Q14699 578 aaPredicted RBP3.52□□□□□ -1.85
CTNNA1-222ENST00000520400 CD226Q15762 336 aa3.52□□□□□ -1.85
CTNNA1-222ENST00000520400 CARTPTQ16568 116 aa3.52□□□□□ -1.85
CTNNA1-222ENST00000520400 LRIT3Q3SXY7 679 aa3.52□□□□□ -1.85
CTNNA1-222ENST00000520400 EIPR1Q53HC9 387 aa3.52□□□□□ -1.85
CTNNA1-222ENST00000520400 ACER2Q5QJU3 275 aa3.52□□□□□ -1.85
CTNNA1-222ENST00000520400 FAM182AQ5T1J6 154 aa3.52□□□□□ -1.85
CTNNA1-222ENST00000520400 ARMCX5Q6P1M9 558 aa3.52□□□□□ -1.85
CTNNA1-222ENST00000520400 FAM159AQ6UWV7 190 aa3.52□□□□□ -1.85
CTNNA1-222ENST00000520400 NAXDQ8IW45 347 aa3.52□□□□□ -1.85
CTNNA1-222ENST00000520400 MCHR2Q969V1 340 aa3.52□□□□□ -1.85
CTNNA1-222ENST00000520400 CCDC47Q96A33 483 aaKnown RBP3.52□□□□□ -1.85
CTNNA1-222ENST00000520400 C1orf147Q96MC9 270 aaPredicted RBP3.52□□□□□ -1.85
CTNNA1-222ENST00000520400 NSMCE2Q96MF7 247 aa3.52□□□□□ -1.85
CTNNA1-222ENST00000520400 FOXN4Q96NZ1 517 aa3.52□□□□□ -1.85
CTNNA1-222ENST00000520400 GPR174Q9BXC1 333 aa3.52□□□□□ -1.85
CTNNA1-222ENST00000520400 FTHL17Q9BXU8 183 aa3.52□□□□□ -1.85
CTNNA1-222ENST00000520400 MBD2Q9UBB5 411 aa3.52□□□□□ -1.85
CTNNA1-222ENST00000520400 EMCNQ9ULC0 261 aa3.52□□□□□ -1.85
CTNNA1-222ENST00000520400 CCPG1Q9ULG6 757 aa3.52□□□□□ -1.85
CTNNA1-222ENST00000520400 SLIT1O75093 1534 aa3.52□□□□□ -1.85
CTNNA1-222ENST00000520400 NKTRP30414 1462 aaKnown RBP3.52□□□□□ -1.85
CTNNA1-222ENST00000520400 CACNA1GO43497 2377 aa3.52□□□□□ -1.85
CTNNA1-222ENST00000520400 TRPM1Q7Z4N2 1603 aa3.52□□□□□ -1.85
CTNNA1-222ENST00000520400 TMEM2Q9UHN6 1383 aa3.51□□□□□ -1.85
CTNNA1-222ENST00000520400 NALCNQ8IZF0 1738 aa3.51□□□□□ -1.85
CTNNA1-222ENST00000520400 ARHGEF28Q8N1W1 1705 aaKnown RBP3.51□□□□□ -1.85
CTNNA1-222ENST00000520400 BCLAF3A2AJT9 711 aaKnown RBP3.51□□□□□ -1.85
CTNNA1-222ENST00000520400 ARHGAP42A6NI28 874 aa3.51□□□□□ -1.85
CTNNA1-222ENST00000520400 CYB561D2O14569 222 aa3.51□□□□□ -1.85
CTNNA1-222ENST00000520400 MCF2LO15068 1137 aa3.51□□□□□ -1.85
CTNNA1-222ENST00000520400 LANCL1O43813 399 aa3.51□□□□□ -1.85
CTNNA1-222ENST00000520400 TOXO94900 526 aa3.51□□□□□ -1.85
CTNNA1-222ENST00000520400 APRTP07741 180 aa3.51□□□□□ -1.85
CTNNA1-222ENST00000520400 RFC2P35250 354 aa3.51□□□□□ -1.85
CTNNA1-222ENST00000520400 PGFP49763 221 aa3.51□□□□□ -1.85
CTNNA1-222ENST00000520400 VCPP55072 806 aaKnown RBP3.51□□□□□ -1.85
CTNNA1-222ENST00000520400 HAGHQ16775 308 aa3.51□□□□□ -1.85
CTNNA1-222ENST00000520400 TMEM52BQ4KMG9 183 aa3.51□□□□□ -1.85
CTNNA1-222ENST00000520400 ATRAIDQ6UW56 229 aa3.51□□□□□ -1.85
CTNNA1-222ENST00000520400 DPY19L2P2Q6ZN68 376 aa3.51□□□□□ -1.85
CTNNA1-222ENST00000520400 MOB2Q70IA6 237 aa3.51□□□□□ -1.85
CTNNA1-222ENST00000520400 MIER3Q7Z3K6 550 aa3.51□□□□□ -1.85
CTNNA1-222ENST00000520400 CEACAM19Q7Z692 300 aa3.51□□□□□ -1.85
CTNNA1-222ENST00000520400 LUZP1Q86V48 1076 aa3.51□□□□□ -1.85
CTNNA1-222ENST00000520400 ARFGAP2Q8N6H7 521 aa3.51□□□□□ -1.85
CTNNA1-222ENST00000520400 ANKRD9Q96BM1 317 aaPredicted RBP3.51□□□□□ -1.85
CTNNA1-222ENST00000520400 FAM122AQ96E09 287 aa3.51□□□□□ -1.85
CTNNA1-222ENST00000520400 FAM111AQ96PZ2 611 aa3.51□□□□□ -1.85
CTNNA1-222ENST00000520400 APOOQ9BUR5 198 aa3.51□□□□□ -1.85
CTNNA1-222ENST00000520400 PLA2G4CQ9UP65 541 aa3.51□□□□□ -1.85
CTNNA1-222ENST00000520400 RNF24Q9Y225 148 aa3.51□□□□□ -1.85
CTNNA1-222ENST00000520400 MRPL11Q9Y3B7 192 aaKnown RBP3.51□□□□□ -1.85
CTNNA1-222ENST00000520400 CLCA3PQ9Y6N3 262 aa3.51□□□□□ -1.85
CTNNA1-222ENST00000520400 QRICH2Q9H0J4 1663 aa3.51□□□□□ -1.85
CTNNA1-222ENST00000520400 ZFYVE9O95405 1425 aa3.51□□□□□ -1.85
CTNNA1-222ENST00000520400 NCOA3Q9Y6Q9 1424 aa3.51□□□□□ -1.85
CTNNA1-222ENST00000520400 LAMC1P11047 1609 aa3.51□□□□□ -1.85
CTNNA1-222ENST00000520400 TONSLQ96HA7 1378 aa3.51□□□□□ -1.85
CTNNA1-222ENST00000520400 RGPD1P0DJD0 1748 aa3.5□□□□□ -1.85
CTNNA1-222ENST00000520400 KNDC1Q76NI1 1749 aa3.5□□□□□ -1.85
CTNNA1-222ENST00000520400 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.5□□□□□ -1.85
CTNNA1-222ENST00000520400 SLIT2O94813 1529 aa3.5□□□□□ -1.85
CTNNA1-222ENST00000520400 ASXL1Q8IXJ9 1541 aa3.5□□□□□ -1.85
CTNNA1-222ENST00000520400 UBE4BO95155 1302 aa3.5□□□□□ -1.85
CTNNA1-222ENST00000520400 A0A087WWV3 80 aa3.5□□□□□ -1.85
CTNNA1-222ENST00000520400 ARPC1BO15143 372 aaKnown RBP3.5□□□□□ -1.85
CTNNA1-222ENST00000520400 PRPSAP2O60256 369 aa3.5□□□□□ -1.85
CTNNA1-222ENST00000520400 SDC3O75056 442 aa3.5□□□□□ -1.85
CTNNA1-222ENST00000520400 TMOD1P28289 359 aa3.5□□□□□ -1.85
CTNNA1-222ENST00000520400 SLC26A5P58743 744 aa3.5□□□□□ -1.85
CTNNA1-222ENST00000520400 SSTP61278 116 aa3.5□□□□□ -1.85
CTNNA1-222ENST00000520400 MYBPC1Q00872 1141 aa3.5□□□□□ -1.85
CTNNA1-222ENST00000520400 SPP2Q13103 211 aa3.5□□□□□ -1.85
CTNNA1-222ENST00000520400 ABRAXAS2Q15018 415 aa3.5□□□□□ -1.85
CTNNA1-222ENST00000520400 CCDC40Q4G0X9 1142 aa3.5□□□□□ -1.85
CTNNA1-222ENST00000520400 C14orf28Q4W4Y0 310 aa3.5□□□□□ -1.85
CTNNA1-222ENST00000520400 VWA2Q5GFL6 755 aa3.5□□□□□ -1.85
CTNNA1-222ENST00000520400 PNCKQ6P2M8 343 aa3.5□□□□□ -1.85
CTNNA1-222ENST00000520400 HIPK1Q86Z02 1210 aa3.5□□□□□ -1.85
CTNNA1-222ENST00000520400 LRRC49Q8IUZ0 686 aa3.5□□□□□ -1.85
CTNNA1-222ENST00000520400 PYROXD2Q8N2H3 581 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms