RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 VRK2Q86Y07 508 aa11.06□□□□□ -0.64
SYNPO-204ENST00000519664 OR8S1Q8NH09 359 aa11.06□□□□□ -0.64
SYNPO-204ENST00000519664 ADAMTS16Q8TE57 1224 aa11.06□□□□□ -0.64
SYNPO-204ENST00000519664 RLN3Q8WXF3 142 aa11.06□□□□□ -0.64
SYNPO-204ENST00000519664 MKRN2Q9H000 416 aaKnown RBP11.06□□□□□ -0.64
SYNPO-204ENST00000519664 LYARQ9NX58 379 aaKnown RBP11.06□□□□□ -0.64
SYNPO-204ENST00000519664 ITGA10O75578 1167 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 S100A6P06703 90 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 C5AR1P21730 350 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 SUOXP51687 545 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 MAB21L1Q13394 359 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 PIP5KL1Q5T9C9 394 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 PJA1Q8NG27 643 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 ARRDC3Q96B67 414 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 MSANTD3Q96H12 275 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 POLDIP3Q9BY77 421 aaKnown RBP11.05□□□□□ -0.64
SYNPO-204ENST00000519664 SFXN1Q9H9B4 322 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 SLC7A7Q9UM01 511 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 STUB1Q9UNE7 303 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 A0A0G2JPF8 293 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 UNC119BA6NIH7 251 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 HNRNPCL3B7ZW38 293 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 MTRF1O75570 445 aaKnown RBP11.05□□□□□ -0.64
SYNPO-204ENST00000519664 ECDO95905 644 aaPredicted RBP11.05□□□□□ -0.64
SYNPO-204ENST00000519664 PTHP01270 115 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 TACSTD2P09758 323 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 HNRNPCL4P0DMR1 293 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 MYOGP15173 224 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 DRD5P21918 477 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 EPHA2P29317 976 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 CD40LGP29965 261 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 HYAL4Q2M3T9 481 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 TMEM35AQ53FP2 167 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 ALG10BQ5I7T1 473 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 PLA2G15Q8NCC3 412 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 OR2L2Q8NH16 312 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 ARSGQ96EG1 525 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 QPCTLQ9NXS2 382 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 GRHPRQ9UBQ7 328 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 SSC5DA1L4H1 1573 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 TRBV2A0A0J9YWF9 115 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 ARHGEF15O94989 841 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 JUNDP17535 347 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 ITGA3P26006 1051 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 MAP2K3P46734 347 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 APOFQ13790 326 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 EXOSC7Q15024 291 aaKnown RBP11.05□□□□□ -0.64
SYNPO-204ENST00000519664 AFMIDQ63HM1 303 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 SLC25A24Q6NUK1 477 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 METTL2BQ6P1Q9 378 aaKnown RBP11.05□□□□□ -0.64
SYNPO-204ENST00000519664 L3MBTL4Q8NA19 623 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 ZNF527Q8NB42 609 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 OR13F1Q8NGS4 319 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 EPYCQ99645 322 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 CXorf36Q9H7Y0 433 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 RBM7Q9Y580 266 aaKnown RBP11.05□□□□□ -0.64
SYNPO-204ENST00000519664 PIAS3Q9Y6X2 628 aa11.05□□□□□ -0.64
SYNPO-204ENST00000519664 GFRA2O00451 464 aa11.04□□□□□ -0.64
SYNPO-204ENST00000519664 RAD1O60671 282 aa11.04□□□□□ -0.64
SYNPO-204ENST00000519664 PLGP00747 810 aaPredicted RBP11.04□□□□□ -0.64
SYNPO-204ENST00000519664 CDK1P06493 297 aa11.04□□□□□ -0.64
SYNPO-204ENST00000519664 NPPBP16860 134 aa11.04□□□□□ -0.64
SYNPO-204ENST00000519664 MAOBP27338 520 aa11.04□□□□□ -0.64
SYNPO-204ENST00000519664 ERP29P30040 261 aaKnown RBP11.04□□□□□ -0.64
SYNPO-204ENST00000519664 GIPRP48546 466 aa11.04□□□□□ -0.64
SYNPO-204ENST00000519664 GAB1Q13480 694 aa11.04□□□□□ -0.64
SYNPO-204ENST00000519664 SLC14A2Q15849 920 aa11.04□□□□□ -0.64
SYNPO-204ENST00000519664 DUSP7Q16829 419 aa11.04□□□□□ -0.64
SYNPO-204ENST00000519664 ZNF767PQ75MW2 155 aa11.04□□□□□ -0.64
SYNPO-204ENST00000519664 OR4F15Q8NGB8 312 aa11.04□□□□□ -0.64
SYNPO-204ENST00000519664 CREB3L4Q8TEY5 395 aa11.04□□□□□ -0.64
SYNPO-204ENST00000519664 ZMYND19Q96E35 227 aaPredicted RBP11.04□□□□□ -0.64
SYNPO-204ENST00000519664 SLC41A3Q96GZ6 507 aa11.04□□□□□ -0.64
SYNPO-204ENST00000519664 UHRF1Q96T88 793 aaPredicted RBP11.04□□□□□ -0.64
SYNPO-204ENST00000519664 INSM2Q96T92 566 aaPredicted RBP11.04□□□□□ -0.64
SYNPO-204ENST00000519664 EGLN3Q9H6Z9 239 aa11.04□□□□□ -0.64
SYNPO-204ENST00000519664 ALKBH4Q9NXW9 302 aa11.04□□□□□ -0.64
SYNPO-204ENST00000519664 TAS2R10Q9NYW0 307 aa11.04□□□□□ -0.64
SYNPO-204ENST00000519664 ZNF69Q9UC07 566 aa11.04□□□□□ -0.64
SYNPO-204ENST00000519664 LTBP4Q8N2S1 1624 aa11.04□□□□□ -0.64
SYNPO-204ENST00000519664 ZNF879B4DU55 563 aa11.04□□□□□ -0.64
SYNPO-204ENST00000519664 ICMTO60725 284 aa11.04□□□□□ -0.64
SYNPO-204ENST00000519664 TSPAN12O95859 305 aa11.04□□□□□ -0.64
SYNPO-204ENST00000519664 DHPSP49366 369 aaPredicted RBP11.04□□□□□ -0.64
SYNPO-204ENST00000519664 MAN2A2P49641 1150 aa11.04□□□□□ -0.64
SYNPO-204ENST00000519664 LBX1P52954 281 aa11.04□□□□□ -0.64
SYNPO-204ENST00000519664 CHRNEQ04844 493 aa11.04□□□□□ -0.64
SYNPO-204ENST00000519664 MRPL58Q14197 206 aaKnown RBP11.04□□□□□ -0.64
SYNPO-204ENST00000519664 FAM78AQ5JUQ0 283 aa11.04□□□□□ -0.64
SYNPO-204ENST00000519664 SLC25A25Q6KCM7 469 aa11.04□□□□□ -0.64
SYNPO-204ENST00000519664 PGBD2Q6P3X8 592 aa11.04□□□□□ -0.64
SYNPO-204ENST00000519664 ARMC10Q8N2F6 343 aa11.04□□□□□ -0.64
SYNPO-204ENST00000519664 OR5M11Q96RB7 305 aa11.04□□□□□ -0.64
SYNPO-204ENST00000519664 MROQ9BYG7 248 aa11.04□□□□□ -0.64
SYNPO-204ENST00000519664 SLC6A17Q9H1V8 727 aa11.04□□□□□ -0.64
SYNPO-204ENST00000519664 DPAGT1Q9H3H5 408 aa11.04□□□□□ -0.64
SYNPO-204ENST00000519664 MYNNQ9NPC7 610 aa11.04□□□□□ -0.64
SYNPO-204ENST00000519664 TMEM184CQ9NVA4 438 aa11.04□□□□□ -0.64
SYNPO-204ENST00000519664 TMEM45AQ9NWC5 275 aa11.04□□□□□ -0.64
SYNPO-204ENST00000519664 RDH8Q9NYR8 311 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms