RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 TBX19O60806 448 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 ERN1O75460 977 aaKnown RBP8.53□□□□□ -1.04
HDAC3-215ENST00000519474 TRAPPC6AO75865 159 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 TOXO94900 526 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 BPGMP07738 259 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 GDF1P27539 372 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 PTPN6P29350 595 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 ADH7P40394 386 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 ETV4P43268 484 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 NCBP2P52298 156 aaKnown RBP eCLIP8.53□□□□□ -1.041e-7■□□□□ 8.9
HDAC3-215ENST00000519474 PNLIPRP2P54317 469 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 CORO7P57737 925 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 RPP38P78345 283 aaKnown RBP8.53□□□□□ -1.04
HDAC3-215ENST00000519474 TFF3Q07654 80 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 SNTA1Q13424 505 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 GAB1Q13480 694 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 EIPR1Q53HC9 387 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 ZNF385BQ569K4 471 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 CES4AQ5XG92 561 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 KANK2Q63ZY3 851 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 VASNQ6EMK4 673 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 ZCCHC23Q6ZST2 131 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 SEM1Q6ZVN7 128 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 ACAD11Q709F0 780 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 EXOC3L1Q86VI1 746 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 SLC44A2Q8IWA5 706 aaPredicted RBP8.53□□□□□ -1.04
HDAC3-215ENST00000519474 FAM9CQ8IZT9 166 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 OR10Q1Q8NGQ4 319 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 OR1J4Q8NGS1 313 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 ASB5Q8WWX0 329 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 GFM2Q969S9 779 aaKnown RBP8.53□□□□□ -1.04
HDAC3-215ENST00000519474 SLC35A4Q96G79 324 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 ZNF597Q96LX8 424 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 C3orf30Q96M34 536 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 AMDHD1Q96NU7 426 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 COL21A1Q96P44 957 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 BTBD9Q96Q07 612 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 ADOQ96SZ5 270 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 TREX2Q9BQ50 279 aaPredicted RBP8.53□□□□□ -1.04
HDAC3-215ENST00000519474 STMN4Q9H169 189 aaPredicted RBP8.53□□□□□ -1.04
HDAC3-215ENST00000519474 GALNT9Q9HCQ5 603 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 GIMAP4Q9NUV9 329 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 FAM53CQ9NYF3 392 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 TAS2R9Q9NYW1 312 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 IL20Q9NYY1 176 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 C15orf41Q9Y2V0 281 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 SLC6A5Q9Y345 797 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 PCDHGB3Q9Y5G1 929 aa8.53□□□□□ -1.04
HDAC3-215ENST00000519474 PHF3Q92576 2039 aaKnown RBP8.53□□□□□ -1.04
HDAC3-215ENST00000519474 A0A0G2JNJ9 132 aa8.52□□□□□ -1.05
HDAC3-215ENST00000519474 NKX2-6A6NCS4 301 aa8.52□□□□□ -1.05
HDAC3-215ENST00000519474 B4DXG7 233 aa8.52□□□□□ -1.05
HDAC3-215ENST00000519474 CTIFO43310 598 aaKnown RBP8.52□□□□□ -1.05
HDAC3-215ENST00000519474 AKAP10O43572 662 aa8.52□□□□□ -1.05
HDAC3-215ENST00000519474 ITM2AO43736 263 aa8.52□□□□□ -1.05
HDAC3-215ENST00000519474 ZIC3O60481 467 aa8.52□□□□□ -1.05
HDAC3-215ENST00000519474 WDR1O75083 606 aa8.52□□□□□ -1.05
HDAC3-215ENST00000519474 CBR3O75828 277 aa8.52□□□□□ -1.05
HDAC3-215ENST00000519474 EPPINO95925 133 aa8.52□□□□□ -1.05
HDAC3-215ENST00000519474 BCKDHAP12694 445 aa8.52□□□□□ -1.05
HDAC3-215ENST00000519474 GABRA1P14867 456 aa8.52□□□□□ -1.05
HDAC3-215ENST00000519474 BMP7P18075 431 aa8.52□□□□□ -1.05
HDAC3-215ENST00000519474 SDC1P18827 310 aa8.52□□□□□ -1.05
HDAC3-215ENST00000519474 CHRNB4P30926 498 aa8.52□□□□□ -1.05
HDAC3-215ENST00000519474 MAP3K8P41279 467 aa8.52□□□□□ -1.05
HDAC3-215ENST00000519474 FRKP42685 505 aaPredicted RBP8.52□□□□□ -1.05
HDAC3-215ENST00000519474 ZFP36L2P47974 494 aaKnown RBP8.52□□□□□ -1.05
HDAC3-215ENST00000519474 MASP1P48740 699 aa8.52□□□□□ -1.05
HDAC3-215ENST00000519474 GAS1P54826 345 aa8.52□□□□□ -1.05
HDAC3-215ENST00000519474 CTAG1AP78358 180 aa8.52□□□□□ -1.05
HDAC3-215ENST00000519474 CRYZQ08257 329 aaKnown RBP8.52□□□□□ -1.05
HDAC3-215ENST00000519474 PLCXD2Q0VAA5 305 aa8.52□□□□□ -1.05
HDAC3-215ENST00000519474 MPP2Q14168 576 aa8.52□□□□□ -1.05
HDAC3-215ENST00000519474 TNFAIP8L3Q5GJ75 292 aa8.52□□□□□ -1.05
HDAC3-215ENST00000519474 NHSL2Q5HYW2 709 aa8.52□□□□□ -1.05
HDAC3-215ENST00000519474 WIPI1Q5MNZ9 446 aaPredicted RBP8.52□□□□□ -1.05
HDAC3-215ENST00000519474 C1orf185Q5T7R7 199 aa8.52□□□□□ -1.05
HDAC3-215ENST00000519474 ANKRD26P1Q6NSI1 321 aa8.52□□□□□ -1.05
HDAC3-215ENST00000519474 ANGPTL8Q6UXH0 198 aa8.52□□□□□ -1.05
HDAC3-215ENST00000519474 B3GNT6Q6ZMB0 384 aa8.52□□□□□ -1.05
HDAC3-215ENST00000519474 ZNF551Q7Z340 670 aaPredicted RBP8.52□□□□□ -1.05
HDAC3-215ENST00000519474 SPATA21Q7Z572 469 aa8.52□□□□□ -1.05
HDAC3-215ENST00000519474 YRDCQ86U90 279 aaKnown RBP8.52□□□□□ -1.05
HDAC3-215ENST00000519474 ULK2Q8IYT8 1036 aa8.52□□□□□ -1.05
HDAC3-215ENST00000519474 OR2L13Q8N349 312 aa8.52□□□□□ -1.05
HDAC3-215ENST00000519474 FAM83FQ8NEG4 500 aaPredicted RBP8.52□□□□□ -1.05
HDAC3-215ENST00000519474 CDC26Q8NHZ8 85 aa8.52□□□□□ -1.05
HDAC3-215ENST00000519474 NUDT8Q8WV74 236 aa8.52□□□□□ -1.05
HDAC3-215ENST00000519474 RNF138Q8WVD3 245 aa8.52□□□□□ -1.05
HDAC3-215ENST00000519474 TMCO6Q96DC7 493 aa8.52□□□□□ -1.05
HDAC3-215ENST00000519474 WDYHV1Q96HA8 205 aa8.52□□□□□ -1.05
HDAC3-215ENST00000519474 REEP4Q9H6H4 257 aa8.52□□□□□ -1.05
HDAC3-215ENST00000519474 RUBCNLQ9H714 662 aa8.52□□□□□ -1.05
HDAC3-215ENST00000519474 METTL7AQ9H8H3 244 aa8.52□□□□□ -1.05
HDAC3-215ENST00000519474 ZNF395Q9H8N7 513 aaPredicted RBP8.52□□□□□ -1.05
HDAC3-215ENST00000519474 MIEF1Q9NQG6 463 aa8.52□□□□□ -1.05
HDAC3-215ENST00000519474 SH3BP4Q9P0V3 963 aa8.52□□□□□ -1.05
HDAC3-215ENST00000519474 Q9UFV3 132 aa8.52□□□□□ -1.05
HDAC3-215ENST00000519474 PCNX3Q9H6A9 2034 aa8.51□□□□□ -1.05
HDAC3-215ENST00000519474 FIGNL2A6NMB9 653 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms