RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 TIGD3Q6B0B8 471 aa12.15□□□□□ -0.46
VEGFA-219ENST00000518824 OR5M10Q6IEU7 315 aa12.15□□□□□ -0.46
VEGFA-219ENST00000518824 LARP4Q71RC2 724 aaKnown RBP eCLIP12.15□□□□□ -0.461e-25■□□□□ 10.3
VEGFA-219ENST00000518824 ZAR1Q86SH2 424 aa12.15□□□□□ -0.46
VEGFA-219ENST00000518824 NUP43Q8NFH3 380 aa12.15□□□□□ -0.46
VEGFA-219ENST00000518824 RNF138Q8WVD3 245 aa12.15□□□□□ -0.46
VEGFA-219ENST00000518824 TMEM41AQ96HV5 264 aa12.15□□□□□ -0.46
VEGFA-219ENST00000518824 LMF2Q9BU23 707 aaKnown RBP12.15□□□□□ -0.46
VEGFA-219ENST00000518824 STMN4Q9H169 189 aaPredicted RBP12.15□□□□□ -0.46
VEGFA-219ENST00000518824 SERHLQ9NQF3 203 aa12.15□□□□□ -0.46
VEGFA-219ENST00000518824 KLRF1Q9NZS2 232 aa12.15□□□□□ -0.46
VEGFA-219ENST00000518824 SUCOQ9UBS9 1254 aaKnown RBP12.15□□□□□ -0.46
VEGFA-219ENST00000518824 FBXL2Q9UKC9 423 aa12.15□□□□□ -0.46
VEGFA-219ENST00000518824 C15orf41Q9Y2V0 281 aa12.15□□□□□ -0.46
VEGFA-219ENST00000518824 OR10H1Q9Y4A9 318 aa12.15□□□□□ -0.46
VEGFA-219ENST00000518824 FAM215AQ9Y5M1 114 aa12.15□□□□□ -0.46
VEGFA-219ENST00000518824 PHF3Q92576 2039 aaKnown RBP12.15□□□□□ -0.47
VEGFA-219ENST00000518824 E9PLN8 166 aa12.14□□□□□ -0.47
VEGFA-219ENST00000518824 C19orf84I3L1E1 186 aa12.14□□□□□ -0.47
VEGFA-219ENST00000518824 SDHDO14521 159 aa12.14□□□□□ -0.47
VEGFA-219ENST00000518824 SUSD5O60279 629 aa12.14□□□□□ -0.47
VEGFA-219ENST00000518824 TRAPPC6AO75865 159 aa12.14□□□□□ -0.47
VEGFA-219ENST00000518824 SNX4O95219 450 aa12.14□□□□□ -0.47
VEGFA-219ENST00000518824 C6orf47O95873 294 aa12.14□□□□□ -0.47
VEGFA-219ENST00000518824 ALDOCP09972 364 aaKnown RBP12.14□□□□□ -0.47
VEGFA-219ENST00000518824 KITP10721 976 aa12.14□□□□□ -0.47
VEGFA-219ENST00000518824 PRPS2P11908 318 aa12.14□□□□□ -0.47
VEGFA-219ENST00000518824 MAPK1P28482 360 aa12.14□□□□□ -0.47
VEGFA-219ENST00000518824 IL12BP29460 328 aa12.14□□□□□ -0.47
VEGFA-219ENST00000518824 GABRA3P34903 492 aa12.14□□□□□ -0.47
VEGFA-219ENST00000518824 HPCAL1P37235 193 aa12.14□□□□□ -0.47
VEGFA-219ENST00000518824 DCTP40126 519 aa12.14□□□□□ -0.47
VEGFA-219ENST00000518824 RFX3P48380 749 aa12.14□□□□□ -0.47
VEGFA-219ENST00000518824 WNT3P56703 355 aa12.14□□□□□ -0.47
VEGFA-219ENST00000518824 NUP107P57740 925 aa12.14□□□□□ -0.47
VEGFA-219ENST00000518824 PHC1P78364 1004 aa12.14□□□□□ -0.47
VEGFA-219ENST00000518824 WIPI1Q5MNZ9 446 aaPredicted RBP12.14□□□□□ -0.47
VEGFA-219ENST00000518824 TBCELQ5QJ74 424 aa12.14□□□□□ -0.47
VEGFA-219ENST00000518824 AGBL2Q5U5Z8 902 aa12.14□□□□□ -0.47
VEGFA-219ENST00000518824 ZNF585AQ6P3V2 769 aa12.14□□□□□ -0.47
VEGFA-219ENST00000518824 TMEM81Q6P7N7 255 aa12.14□□□□□ -0.47
VEGFA-219ENST00000518824 PAOXQ6QHF9 649 aa12.14□□□□□ -0.47
VEGFA-219ENST00000518824 SZRD1Q7Z422 152 aa12.14□□□□□ -0.47
VEGFA-219ENST00000518824 MAVSQ7Z434 540 aa12.14□□□□□ -0.47
VEGFA-219ENST00000518824 R3HCC1LQ7Z5L2 792 aaKnown RBP12.14□□□□□ -0.47
VEGFA-219ENST00000518824 YRDCQ86U90 279 aaKnown RBP12.14□□□□□ -0.47
VEGFA-219ENST00000518824 PACS2Q86VP3 889 aa12.14□□□□□ -0.47
VEGFA-219ENST00000518824 CLEC4FQ8N1N0 589 aa12.14□□□□□ -0.47
VEGFA-219ENST00000518824 SLC16A11Q8NCK7 471 aa12.14□□□□□ -0.47
VEGFA-219ENST00000518824 OR1J4Q8NGS1 313 aa12.14□□□□□ -0.47
VEGFA-219ENST00000518824 NEIL3Q8TAT5 605 aa12.14□□□□□ -0.47
VEGFA-219ENST00000518824 HOXB13Q92826 284 aaPredicted RBP12.14□□□□□ -0.47
VEGFA-219ENST00000518824 COQ8BQ96D53 544 aa12.14□□□□□ -0.47
VEGFA-219ENST00000518824 MTERF3Q96E29 417 aa12.14□□□□□ -0.47
VEGFA-219ENST00000518824 FAM120BQ96EK7 910 aaKnown RBP12.14□□□□□ -0.47
VEGFA-219ENST00000518824 ZBED6CLQ96FA7 236 aaPredicted RBP12.14□□□□□ -0.47
VEGFA-219ENST00000518824 VKORC1Q9BQB6 163 aa12.14□□□□□ -0.47
VEGFA-219ENST00000518824 WDR55Q9H6Y2 383 aaPredicted RBP12.14□□□□□ -0.47
VEGFA-219ENST00000518824 EXO5Q9H790 373 aa12.14□□□□□ -0.47
VEGFA-219ENST00000518824 CXorf36Q9H7Y0 433 aa12.14□□□□□ -0.47
VEGFA-219ENST00000518824 ACKR4Q9NPB9 350 aa12.14□□□□□ -0.47
VEGFA-219ENST00000518824 ACSS1Q9NUB1 689 aaPredicted RBP12.14□□□□□ -0.47
VEGFA-219ENST00000518824 FBXO34Q9NWN3 711 aa12.14□□□□□ -0.47
VEGFA-219ENST00000518824 NTMQ9P121 344 aa12.14□□□□□ -0.47
VEGFA-219ENST00000518824 CBLCQ9ULV8 474 aa12.14□□□□□ -0.47
VEGFA-219ENST00000518824 GOLGA8QA0A0J9YX86 632 aa12.13□□□□□ -0.47
VEGFA-219ENST00000518824 A0A1W2PRB8 838 aa12.13□□□□□ -0.47
VEGFA-219ENST00000518824 GOLGA8OA6NCC3 632 aa12.13□□□□□ -0.47
VEGFA-219ENST00000518824 C9JVG2 144 aa12.13□□□□□ -0.47
VEGFA-219ENST00000518824 PRSS44E7EML9 344 aa12.13□□□□□ -0.47
VEGFA-219ENST00000518824 GOLGA8NF8WBI6 632 aa12.13□□□□□ -0.47
VEGFA-219ENST00000518824 ANKRD28O15084 1053 aa12.13□□□□□ -0.47
VEGFA-219ENST00000518824 SCO2O43819 266 aa12.13□□□□□ -0.47
VEGFA-219ENST00000518824 HCN1O60741 890 aa12.13□□□□□ -0.47
VEGFA-219ENST00000518824 SLITRK5O94991 958 aa12.13□□□□□ -0.47
VEGFA-219ENST00000518824 C1QCP02747 245 aa12.13□□□□□ -0.47
VEGFA-219ENST00000518824 HPNP05981 417 aa12.13□□□□□ -0.47
VEGFA-219ENST00000518824 H2AFXP16104 143 aaPredicted RBP12.13□□□□□ -0.47
VEGFA-219ENST00000518824 TCEA1P23193 301 aaKnown RBP12.13□□□□□ -0.47
VEGFA-219ENST00000518824 SLC18A1P54219 525 aa12.13□□□□□ -0.47
VEGFA-219ENST00000518824 PNLIPRP2P54317 469 aa12.13□□□□□ -0.47
VEGFA-219ENST00000518824 CLDN8P56748 225 aa12.13□□□□□ -0.47
VEGFA-219ENST00000518824 OCRLQ01968 901 aa12.13□□□□□ -0.47
VEGFA-219ENST00000518824 TOMM20Q15388 145 aa12.13□□□□□ -0.47
VEGFA-219ENST00000518824 DUSP5Q16690 384 aa12.13□□□□□ -0.47
VEGFA-219ENST00000518824 EXOSC6Q5RKV6 272 aaKnown RBP12.13□□□□□ -0.47
VEGFA-219ENST00000518824 CPTPQ5TA50 214 aa12.13□□□□□ -0.47
VEGFA-219ENST00000518824 OR4F3Q6IEY1 312 aa12.13□□□□□ -0.47
VEGFA-219ENST00000518824 SLC30A6Q6NXT4 461 aa12.13□□□□□ -0.47
VEGFA-219ENST00000518824 APOOLQ6UXV4 268 aa12.13□□□□□ -0.47
VEGFA-219ENST00000518824 CCDC71Q8IV32 467 aaPredicted RBP12.13□□□□□ -0.47
VEGFA-219ENST00000518824 WDR75Q8IWA0 830 aaKnown RBP12.13□□□□□ -0.47
VEGFA-219ENST00000518824 CLECL1Q8IZS7 167 aa12.13□□□□□ -0.47
VEGFA-219ENST00000518824 ZNF808Q8N4W9 903 aaPredicted RBP12.13□□□□□ -0.47
VEGFA-219ENST00000518824 FAM83FQ8NEG4 500 aaPredicted RBP12.13□□□□□ -0.47
VEGFA-219ENST00000518824 ZFP28Q8NHY6 868 aa12.13□□□□□ -0.47
VEGFA-219ENST00000518824 SLC9A6Q92581 669 aa12.13□□□□□ -0.47
VEGFA-219ENST00000518824 RMND5BQ96G75 393 aaPredicted RBP12.13□□□□□ -0.47
VEGFA-219ENST00000518824 TEX37Q96LM6 180 aa12.13□□□□□ -0.47
VEGFA-219ENST00000518824 MEAF6Q9HAF1 191 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms