RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 SEC14L6B5MCN3 397 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 H0YIN7 160 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 H7BY64 318 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 J3KRW8 73 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 APOC4-APOC2K7ER74 178 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 CLIC1O00299 241 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 QSOX1O00391 747 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 MATN3O15232 486 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 PLA2G10O15496 165 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 TGOLN2O43493 480 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 PRDM1O75626 825 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 MATN4O95460 622 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 DIRAS3O95661 229 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 FADS2O95864 444 aaKnown RBP4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 F2P00734 622 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 CST1P01037 141 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 APOC2P02655 101 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 CSF2P04141 144 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 LPLP06858 475 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 IGFBP1P08833 259 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 GIPP09681 153 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 SULT1A3P0DMM9 295 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 SULT1A4P0DMN0 295 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 C1GALT1C1LP0DN25 315 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 HAPLN1P10915 354 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 CYP4B1P13584 511 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 MUC1P15941 1255 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 RHCEP18577 417 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 AGAP20933 346 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 DTYMKP23919 212 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 KDELR1P24390 212 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 SLC6A1P30531 599 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 AGTR1P30556 359 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 HOXA11P31270 313 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 SLC6A4P31645 630 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 GRK5P34947 590 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 MPIP34949 423 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 ARR3P36575 388 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 CDX1P47902 265 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 CSNK1DP48730 415 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 MRPL19P49406 292 aaKnown RBP4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 AP3S2P59780 193 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 RAB8AP61006 207 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 TIMM10P62072 90 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 C2orf80Q0P641 193 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 EIF4EBP2Q13542 120 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 FCN2Q15485 313 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 TESK1Q15569 626 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 MPPED2Q15777 294 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 FSCN1Q16658 493 aaKnown RBP4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 CTU2Q2VPK5 515 aaKnown RBP4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 HSDL1Q3SXM5 330 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 SYTL3Q4VX76 610 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 SBK1Q52WX2 424 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 FNDC3BQ53EP0 1204 aaKnown RBP4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 C10orf91Q5T1B1 145 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 C1orf185Q5T7R7 199 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 ARMC12Q5T9G4 340 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 STRIP1Q5VSL9 837 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 SLC22A10Q63ZE4 541 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 LPCAT3Q6P1A2 487 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 ZNF529Q6P280 563 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 C19orf48Q6RUI8 117 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 DLK2Q6UY11 383 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 ZNF720Q7Z2F6 126 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 GALNTL5Q7Z4T8 443 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 RANBP3LQ86VV4 465 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 IFNEQ86WN2 208 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 CIR1Q86X95 450 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 ZNF761Q86XN6 746 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 FUNDC1Q8IVP5 155 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 CDK20Q8IZL9 346 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 MIER2Q8N344 545 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 GPR137CQ8N3F9 429 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 SPICQ8N5J4 248 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 ACBD4Q8NC06 268 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 NAXEQ8NCW5 288 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 GMCL1P1Q8NEA9 526 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 NUDT10Q8NFP7 164 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 IL17REQ8NFR9 667 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 NLGN4YQ8NFZ3 816 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 OR4Q3Q8NH05 313 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 OR4C6Q8NH72 309 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 OR10A6Q8NH74 314 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 COQ8AQ8NI60 647 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 OLIG1Q8TAK6 271 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 TMEM163Q8TC26 289 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 DCAF4Q8WV16 495 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 XAGE5Q8WWM1 108 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 CENPIQ92674 756 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 LRRC58Q96CX6 371 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 COQ8BQ96D53 544 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 MALSU1Q96EH3 234 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 RPL10LQ96L21 214 aaKnown RBP4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 SENP8Q96LD8 212 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 CASD1Q96PB1 797 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 SLC2A13Q96QE2 648 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 TMEM209Q96SK2 561 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 MBOAT4Q96T53 435 aa4.53□□□□□ -1.68
HMGB1P19-201ENST00000517578 GPR20Q99678 358 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms