RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 PSMB1P20618 241 aaKnown RBP3.34□□□□□ -1.87
SMARCA5-203ENST00000515531 RFC2P35250 354 aa3.34□□□□□ -1.87
SMARCA5-203ENST00000515531 RPS8P62241 208 aaKnown RBP3.34□□□□□ -1.87
SMARCA5-203ENST00000515531 HERVK_113P63132 956 aa3.34□□□□□ -1.87
SMARCA5-203ENST00000515531 ERVK-8P63133 956 aa3.34□□□□□ -1.87
SMARCA5-203ENST00000515531 CAPRIN1Q14444 709 aaKnown RBP3.34□□□□□ -1.87
SMARCA5-203ENST00000515531 PKN2Q16513 984 aaKnown RBP3.34□□□□□ -1.87
SMARCA5-203ENST00000515531 BATF2Q8N1L9 274 aa3.34□□□□□ -1.87
SMARCA5-203ENST00000515531 C14orf178Q8N769 122 aaPredicted RBP3.34□□□□□ -1.87
SMARCA5-203ENST00000515531 CCNYQ8ND76 341 aa3.34□□□□□ -1.87
SMARCA5-203ENST00000515531 ZNF397Q8NF99 534 aaPredicted RBP3.34□□□□□ -1.87
SMARCA5-203ENST00000515531 ATP6V0A1Q93050 837 aa3.34□□□□□ -1.87
SMARCA5-203ENST00000515531 TADA1Q96BN2 335 aa3.34□□□□□ -1.87
SMARCA5-203ENST00000515531 CCDC51Q96ER9 411 aa3.34□□□□□ -1.87
SMARCA5-203ENST00000515531 SPATA13Q96N96 652 aa3.34□□□□□ -1.87
SMARCA5-203ENST00000515531 DPH7Q9BTV6 452 aa3.34□□□□□ -1.87
SMARCA5-203ENST00000515531 C19orf24Q9BVV8 132 aa3.34□□□□□ -1.87
SMARCA5-203ENST00000515531 TSSK1BQ9BXA7 367 aa3.34□□□□□ -1.87
SMARCA5-203ENST00000515531 ERVK-6Q9BXR3 956 aa3.34□□□□□ -1.87
SMARCA5-203ENST00000515531 FTHL17Q9BXU8 183 aa3.34□□□□□ -1.87
SMARCA5-203ENST00000515531 NMUR2Q9GZQ4 415 aa3.34□□□□□ -1.87
SMARCA5-203ENST00000515531 ELOVL2Q9NXB9 296 aa3.34□□□□□ -1.87
SMARCA5-203ENST00000515531 TMEM9Q9P0T7 183 aa3.34□□□□□ -1.87
SMARCA5-203ENST00000515531 MBD2Q9UBB5 411 aa3.34□□□□□ -1.87
SMARCA5-203ENST00000515531 BCAP29Q9UHQ4 241 aa3.34□□□□□ -1.87
SMARCA5-203ENST00000515531 PDE10AQ9Y233 779 aa3.34□□□□□ -1.87
SMARCA5-203ENST00000515531 STRAPQ9Y3F4 350 aaKnown RBP3.34□□□□□ -1.87
SMARCA5-203ENST00000515531 KLF2Q9Y5W3 355 aaPredicted RBP3.34□□□□□ -1.87
SMARCA5-203ENST00000515531 ZMYM6O95789 1325 aa3.34□□□□□ -1.87
SMARCA5-203ENST00000515531 USP6P35125 1406 aa3.34□□□□□ -1.88
SMARCA5-203ENST00000515531 A0A0U1RRA0 63 aa3.33□□□□□ -1.88
SMARCA5-203ENST00000515531 ACTL6AO96019 429 aa3.33□□□□□ -1.88
SMARCA5-203ENST00000515531 HSPB1P04792 205 aaKnown RBP3.33□□□□□ -1.88
SMARCA5-203ENST00000515531 SLC35G4P0C7Q5 338 aa3.33□□□□□ -1.88
SMARCA5-203ENST00000515531 ELK1P19419 428 aa3.33□□□□□ -1.88
SMARCA5-203ENST00000515531 HLA-DPA1P20036 260 aa3.33□□□□□ -1.88
SMARCA5-203ENST00000515531 NF2P35240 595 aa3.33□□□□□ -1.88
SMARCA5-203ENST00000515531 SLC6A8P48029 635 aa3.33□□□□□ -1.88
SMARCA5-203ENST00000515531 RIPK4P57078 832 aa3.33□□□□□ -1.88
SMARCA5-203ENST00000515531 CBX3Q13185 183 aa3.33□□□□□ -1.88
SMARCA5-203ENST00000515531 ACSF3Q4G176 576 aaPredicted RBP3.33□□□□□ -1.88
SMARCA5-203ENST00000515531 AGKQ53H12 422 aa3.33□□□□□ -1.88
SMARCA5-203ENST00000515531 MOB1BQ7L9L4 216 aa3.33□□□□□ -1.88
SMARCA5-203ENST00000515531 ADAMTSL2Q86TH1 951 aa3.33□□□□□ -1.88
SMARCA5-203ENST00000515531 CEND1Q8N111 149 aa3.33□□□□□ -1.88
SMARCA5-203ENST00000515531 NEK11Q8NG66 645 aa3.33□□□□□ -1.88
SMARCA5-203ENST00000515531 WDR36Q8NI36 951 aaKnown RBP3.33□□□□□ -1.88
SMARCA5-203ENST00000515531 GLT8D2Q9H1C3 349 aa3.33□□□□□ -1.88
SMARCA5-203ENST00000515531 ABCG8Q9H221 673 aa3.33□□□□□ -1.88
SMARCA5-203ENST00000515531 DUS2Q9NX74 493 aaKnown RBP3.33□□□□□ -1.88
SMARCA5-203ENST00000515531 CA5BQ9Y2D0 317 aa3.33□□□□□ -1.88
SMARCA5-203ENST00000515531 DDX39AO00148 427 aaKnown RBP3.32□□□□□ -1.88
SMARCA5-203ENST00000515531 STAM2O75886 525 aa3.32□□□□□ -1.88
SMARCA5-203ENST00000515531 PGK1P00558 417 aa3.32□□□□□ -1.88
SMARCA5-203ENST00000515531 PGK2P07205 417 aa3.32□□□□□ -1.88
SMARCA5-203ENST00000515531 IGFBP1P08833 259 aaPredicted RBP3.32□□□□□ -1.88
SMARCA5-203ENST00000515531 ZP3P21754 424 aa3.32□□□□□ -1.88
SMARCA5-203ENST00000515531 PTBP1P26599 531 aaKnown RBP eCLIP3.32□□□□□ -1.88
SMARCA5-203ENST00000515531 UGT1A3P35503 534 aa3.32□□□□□ -1.88
SMARCA5-203ENST00000515531 OR3A4PP47883 348 aa3.32□□□□□ -1.88
SMARCA5-203ENST00000515531 SLC26A2P50443 739 aa3.32□□□□□ -1.88
SMARCA5-203ENST00000515531 DIO3P55073 304 aa3.32□□□□□ -1.88
SMARCA5-203ENST00000515531 MYBPC1Q00872 1141 aa3.32□□□□□ -1.88
SMARCA5-203ENST00000515531 LASP1Q14847 261 aaKnown RBP3.32□□□□□ -1.88
SMARCA5-203ENST00000515531 DCAF4L1Q3SXM0 396 aa3.32□□□□□ -1.88
SMARCA5-203ENST00000515531 IL23RQ5VWK5 629 aa3.32□□□□□ -1.88
SMARCA5-203ENST00000515531 TFAP2EQ6VUC0 442 aa3.32□□□□□ -1.88
SMARCA5-203ENST00000515531 PARGQ86W56 976 aa3.32□□□□□ -1.88
SMARCA5-203ENST00000515531 C9orf40Q8IXQ3 194 aa3.32□□□□□ -1.88
SMARCA5-203ENST00000515531 C16orf74Q96GX8 76 aa3.32□□□□□ -1.88
SMARCA5-203ENST00000515531 VPS39Q96JC1 886 aa3.32□□□□□ -1.88
SMARCA5-203ENST00000515531 ACAT2Q9BWD1 397 aa3.32□□□□□ -1.88
SMARCA5-203ENST00000515531 TM2D1Q9BX74 207 aa3.32□□□□□ -1.88
SMARCA5-203ENST00000515531 SIRPDQ9H106 197 aa3.32□□□□□ -1.88
SMARCA5-203ENST00000515531 ZNF702PQ9H963 129 aa3.32□□□□□ -1.88
SMARCA5-203ENST00000515531 GHRLQ9UBU3 117 aa3.32□□□□□ -1.88
SMARCA5-203ENST00000515531 KCNN3Q9UGI6 736 aa3.32□□□□□ -1.88
SMARCA5-203ENST00000515531 APPL1Q9UKG1 709 aa3.32□□□□□ -1.88
SMARCA5-203ENST00000515531 RPGRIP1LQ68CZ1 1315 aa3.31□□□□□ -1.88
SMARCA5-203ENST00000515531 TOXO94900 526 aa3.31□□□□□ -1.88
SMARCA5-203ENST00000515531 OLFM2O95897 454 aa3.31□□□□□ -1.88
SMARCA5-203ENST00000515531 CPN1P15169 458 aa3.31□□□□□ -1.88
SMARCA5-203ENST00000515531 CYP11B1P15538 503 aa3.31□□□□□ -1.88
SMARCA5-203ENST00000515531 HLCSP50747 726 aa3.31□□□□□ -1.88
SMARCA5-203ENST00000515531 KYAT1Q16773 422 aa3.31□□□□□ -1.88
SMARCA5-203ENST00000515531 CCDC184Q52MB2 194 aa3.31□□□□□ -1.88
SMARCA5-203ENST00000515531 SLX4IPQ5VYV7 408 aa3.31□□□□□ -1.88
SMARCA5-203ENST00000515531 PNCKQ6P2M8 343 aa3.31□□□□□ -1.88
SMARCA5-203ENST00000515531 OLFM4Q6UX06 510 aa3.31□□□□□ -1.88
SMARCA5-203ENST00000515531 Q6ZVH6 145 aa3.31□□□□□ -1.88
SMARCA5-203ENST00000515531 MIER3Q7Z3K6 550 aa3.31□□□□□ -1.88
SMARCA5-203ENST00000515531 TAF8Q7Z7C8 310 aa3.31□□□□□ -1.88
SMARCA5-203ENST00000515531 TICAM2Q86XR7 235 aa3.31□□□□□ -1.88
SMARCA5-203ENST00000515531 CSNK1A1LQ8N752 337 aa3.31□□□□□ -1.88
SMARCA5-203ENST00000515531 URGCPQ8TCY9 931 aa3.31□□□□□ -1.88
SMARCA5-203ENST00000515531 SETD7Q8WTS6 366 aaKnown RBP3.31□□□□□ -1.88
SMARCA5-203ENST00000515531 SLC25A38Q96DW6 304 aa3.31□□□□□ -1.88
SMARCA5-203ENST00000515531 DHTKD1Q96HY7 919 aaPredicted RBP3.31□□□□□ -1.88
SMARCA5-203ENST00000515531 WWP2O00308 870 aa3.3□□□□□ -1.88
SMARCA5-203ENST00000515531 OR7A17O14581 309 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms