RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 BCORP1Q8N888 145 aa3.86□□□□□ -1.79
HMGCS1-207ENST00000514610 OR52B4Q8NGK2 314 aa3.86□□□□□ -1.79
HMGCS1-207ENST00000514610 C9orf85Q96MD7 179 aa3.86□□□□□ -1.79
HMGCS1-207ENST00000514610 FAM120CQ9NX05 1096 aaKnown RBP3.86□□□□□ -1.79
HMGCS1-207ENST00000514610 IMPAD1Q9NX62 359 aa3.86□□□□□ -1.79
HMGCS1-207ENST00000514610 GHRLQ9UBU3 117 aa3.86□□□□□ -1.79
HMGCS1-207ENST00000514610 HOOK1Q9UJC3 728 aaKnown RBP3.86□□□□□ -1.79
HMGCS1-207ENST00000514610 NTNG1Q9Y2I2 539 aa3.86□□□□□ -1.79
HMGCS1-207ENST00000514610 DHRS7Q9Y394 339 aa3.86□□□□□ -1.79
HMGCS1-207ENST00000514610 GJB5O95377 273 aa3.85□□□□□ -1.79
HMGCS1-207ENST00000514610 PRAMEF12O95522 483 aa3.85□□□□□ -1.79
HMGCS1-207ENST00000514610 FASP25445 335 aa3.85□□□□□ -1.79
HMGCS1-207ENST00000514610 CD86P42081 329 aa3.85□□□□□ -1.79
HMGCS1-207ENST00000514610 GMFBP60983 142 aa3.85□□□□□ -1.79
HMGCS1-207ENST00000514610 PPIAP62937 165 aaKnown RBP3.85□□□□□ -1.79
HMGCS1-207ENST00000514610 CXCL6P80162 114 aa3.85□□□□□ -1.79
HMGCS1-207ENST00000514610 TGIF1Q15583 401 aa3.85□□□□□ -1.79
HMGCS1-207ENST00000514610 CERS5Q8N5B7 392 aa3.85□□□□□ -1.79
HMGCS1-207ENST00000514610 VN1R17PQ8TDU5 208 aa3.85□□□□□ -1.79
HMGCS1-207ENST00000514610 ART4Q93070 314 aa3.85□□□□□ -1.79
HMGCS1-207ENST00000514610 KAT8Q9H7Z6 458 aaKnown RBP3.85□□□□□ -1.79
HMGCS1-207ENST00000514610 TRPV5Q9NQA5 729 aa3.85□□□□□ -1.79
HMGCS1-207ENST00000514610 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.85□□□□□ -1.79
HMGCS1-207ENST00000514610 DUS2Q9NX74 493 aaKnown RBP3.85□□□□□ -1.79
HMGCS1-207ENST00000514610 ACTR3BQ9P1U1 418 aa3.85□□□□□ -1.79
HMGCS1-207ENST00000514610 RSPH14Q9UHP6 348 aa3.85□□□□□ -1.79
HMGCS1-207ENST00000514610 METP08581 1390 aa3.85□□□□□ -1.79
HMGCS1-207ENST00000514610 A0A0U1RQV5 110 aa3.84□□□□□ -1.79
HMGCS1-207ENST00000514610 A0A1B0GVY2 172 aa3.84□□□□□ -1.79
HMGCS1-207ENST00000514610 FRG2CA6NGY1 282 aa3.84□□□□□ -1.79
HMGCS1-207ENST00000514610 EFCAB7A8K855 629 aa3.84□□□□□ -1.79
HMGCS1-207ENST00000514610 SLC35E2P0CK97 266 aa3.84□□□□□ -1.79
HMGCS1-207ENST00000514610 IL2RGP31785 369 aa3.84□□□□□ -1.79
HMGCS1-207ENST00000514610 ALDH3B2P48448 385 aa3.84□□□□□ -1.79
HMGCS1-207ENST00000514610 RPS6P62753 249 aaKnown RBP3.84□□□□□ -1.79
HMGCS1-207ENST00000514610 RAB35Q15286 201 aa3.84□□□□□ -1.79
HMGCS1-207ENST00000514610 CCDC92Q53HC0 331 aaPredicted RBP3.84□□□□□ -1.79
HMGCS1-207ENST00000514610 VITQ6UXI7 678 aa3.84□□□□□ -1.79
HMGCS1-207ENST00000514610 UNC5DQ6UXZ4 953 aa3.84□□□□□ -1.79
HMGCS1-207ENST00000514610 ZSCAN30Q86W11 494 aa3.84□□□□□ -1.79
HMGCS1-207ENST00000514610 CD177Q8N6Q3 437 aa3.84□□□□□ -1.79
HMGCS1-207ENST00000514610 MRAPQ8TCY5 172 aa3.84□□□□□ -1.79
HMGCS1-207ENST00000514610 PPP1R16AQ96I34 528 aa3.84□□□□□ -1.79
HMGCS1-207ENST00000514610 HCAR1Q9BXC0 346 aa3.84□□□□□ -1.79
HMGCS1-207ENST00000514610 CCSER1Q9C0I3 900 aa3.84□□□□□ -1.79
HMGCS1-207ENST00000514610 KLRF1Q9NZS2 232 aa3.84□□□□□ -1.79
HMGCS1-207ENST00000514610 Q9UF83 564 aa3.84□□□□□ -1.79
HMGCS1-207ENST00000514610 BARX2Q9UMQ3 279 aaPredicted RBP3.84□□□□□ -1.79
HMGCS1-207ENST00000514610 FOXJ3Q9UPW0 622 aa3.84□□□□□ -1.79
HMGCS1-207ENST00000514610 EXOSC1Q9Y3B2 195 aaKnown RBP3.84□□□□□ -1.79
HMGCS1-207ENST00000514610 TP53BP1Q12888 1972 aaPredicted RBP3.83□□□□□ -1.8
HMGCS1-207ENST00000514610 IGHV3-35A0A0C4DH35 117 aa3.83□□□□□ -1.8
HMGCS1-207ENST00000514610 TRBV7-9A0A0J9YWB2 115 aa3.83□□□□□ -1.8
HMGCS1-207ENST00000514610 FAM230AA0A1W2PPH8 454 aa3.83□□□□□ -1.8
HMGCS1-207ENST00000514610 G3V3Y1 287 aa3.83□□□□□ -1.8
HMGCS1-207ENST00000514610 H3BTX0 84 aa3.83□□□□□ -1.8
HMGCS1-207ENST00000514610 TM9SF1O15321 606 aa3.83□□□□□ -1.8
HMGCS1-207ENST00000514610 SLC2A10O95528 541 aa3.83□□□□□ -1.8
HMGCS1-207ENST00000514610 CA3P07451 260 aa3.83□□□□□ -1.8
HMGCS1-207ENST00000514610 ANXA4P09525 319 aaPredicted RBP3.83□□□□□ -1.8
HMGCS1-207ENST00000514610 CT45A10P0DMU9 189 aa3.83□□□□□ -1.8
HMGCS1-207ENST00000514610 RRASP10301 218 aa3.83□□□□□ -1.8
HMGCS1-207ENST00000514610 MAGEA9P43362 315 aa3.83□□□□□ -1.8
HMGCS1-207ENST00000514610 METAP1P53582 386 aa3.83□□□□□ -1.8
HMGCS1-207ENST00000514610 ERVPABLB-1P60509 514 aa3.83□□□□□ -1.8
HMGCS1-207ENST00000514610 EXOSC2Q13868 293 aaKnown RBP3.83□□□□□ -1.8
HMGCS1-207ENST00000514610 TFDP1Q14186 410 aa3.83□□□□□ -1.8
HMGCS1-207ENST00000514610 CDKN3Q16667 212 aa3.83□□□□□ -1.8
HMGCS1-207ENST00000514610 TMEM52BQ4KMG9 183 aa3.83□□□□□ -1.8
HMGCS1-207ENST00000514610 C12orf60Q5U649 245 aa3.83□□□□□ -1.8
HMGCS1-207ENST00000514610 BTNL3Q6UXE8 466 aa3.83□□□□□ -1.8
HMGCS1-207ENST00000514610 PAMR1Q6UXH9 720 aa3.83□□□□□ -1.8
HMGCS1-207ENST00000514610 BAIAP2L2Q6UXY1 529 aa3.83□□□□□ -1.8
HMGCS1-207ENST00000514610 Q7L0L9 218 aa3.83□□□□□ -1.8
HMGCS1-207ENST00000514610 ERASQ7Z444 233 aa3.83□□□□□ -1.8
HMGCS1-207ENST00000514610 ADCK1Q86TW2 530 aa3.83□□□□□ -1.8
HMGCS1-207ENST00000514610 CCT8L2Q96SF2 557 aa3.83□□□□□ -1.8
HMGCS1-207ENST00000514610 TM2D1Q9BX74 207 aa3.83□□□□□ -1.8
HMGCS1-207ENST00000514610 GPN2Q9H9Y4 310 aaPredicted RBP3.83□□□□□ -1.8
HMGCS1-207ENST00000514610 SLC2A6Q9UGQ3 507 aa3.83□□□□□ -1.8
HMGCS1-207ENST00000514610 PARD3Q8TEW0 1356 aa3.83□□□□□ -1.8
HMGCS1-207ENST00000514610 A8MX80 341 aa3.82□□□□□ -1.8
HMGCS1-207ENST00000514610 SLC17A2O00624 439 aa3.82□□□□□ -1.8
HMGCS1-207ENST00000514610 LCMT2O60294 686 aaKnown RBP3.82□□□□□ -1.8
HMGCS1-207ENST00000514610 TOM1L1O75674 476 aa3.82□□□□□ -1.8
HMGCS1-207ENST00000514610 AKR7A3O95154 331 aa3.82□□□□□ -1.8
HMGCS1-207ENST00000514610 PGAM2P15259 253 aa3.82□□□□□ -1.8
HMGCS1-207ENST00000514610 ARF4P18085 180 aaPredicted RBP3.82□□□□□ -1.8
HMGCS1-207ENST00000514610 CCND2P30279 289 aa3.82□□□□□ -1.8
HMGCS1-207ENST00000514610 IL18R1Q13478 541 aa3.82□□□□□ -1.8
HMGCS1-207ENST00000514610 UBE2V2Q15819 145 aa3.82□□□□□ -1.8
HMGCS1-207ENST00000514610 UTF1Q5T230 341 aa3.82□□□□□ -1.8
HMGCS1-207ENST00000514610 LGSNQ5TDP6 509 aa3.82□□□□□ -1.8
HMGCS1-207ENST00000514610 KRTAP5-1Q6L8H4 278 aa3.82□□□□□ -1.8
HMGCS1-207ENST00000514610 LPCAT2Q7L5N7 544 aa3.82□□□□□ -1.8
HMGCS1-207ENST00000514610 VPS36Q86VN1 386 aa3.82□□□□□ -1.8
HMGCS1-207ENST00000514610 PARGQ86W56 976 aa3.82□□□□□ -1.8
HMGCS1-207ENST00000514610 FBXL16Q8N461 479 aa3.82□□□□□ -1.8
HMGCS1-207ENST00000514610 Q8N9G6 341 aaPredicted RBP3.82□□□□□ -1.8
HMGCS1-207ENST00000514610 ZPLD1Q8TCW7 415 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms