RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 SELPLGQ14242 412 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 ZNF169Q14929 603 aaPredicted RBP7.71□□□□□ -1.18
CCL28-204ENST00000514421 TRIP10Q15642 601 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 ZNF750Q32MQ0 723 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 COLEC12Q5KU26 742 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 INTS11Q5TA45 600 aaKnown RBP7.71□□□□□ -1.18
CCL28-204ENST00000514421 RPUSD3Q6P087 351 aaKnown RBP7.71□□□□□ -1.18
CCL28-204ENST00000514421 TUBA3EQ6PEY2 450 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 FKBP9P1Q75LS8 142 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 PRICKLE2Q7Z3G6 844 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 SERPINA11Q86U17 422 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 GALNT12Q8IXK2 581 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 CCDC116Q8IYX3 515 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 MMP21Q8N119 569 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 BEST3Q8N1M1 668 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 HORMAD2Q8N7B1 307 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 PACRGLQ8N7B6 248 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 ZNF321PQ8N8H1 164 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 Q8NA96 180 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 SUN3Q8TAQ9 357 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 DOK4Q8TEW6 326 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 THAP3Q8WTV1 239 aaPredicted RBP7.71□□□□□ -1.18
CCL28-204ENST00000514421 CANT1Q8WVQ1 401 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 CNRIP1Q96F85 164 aaPredicted RBP7.71□□□□□ -1.18
CCL28-204ENST00000514421 FBXL20Q96IG2 436 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 LRGUKQ96M69 825 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 ZNF681Q96N22 645 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 TSSK3Q96PN8 268 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 CNPPD1Q9BV87 410 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 SPATA9Q9BWV2 254 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 EBPLQ9BY08 206 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 BHLHE41Q9C0J9 482 aaPredicted RBP7.71□□□□□ -1.18
CCL28-204ENST00000514421 IKZF5Q9H5V7 419 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 TRIM45Q9H8W5 580 aaPredicted RBP7.71□□□□□ -1.18
CCL28-204ENST00000514421 MYNNQ9NPC7 610 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 SLC35C2Q9NQQ7 365 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 SLC6A13Q9NSD5 602 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 RYDENQ9NUL5 291 aaKnown RBP7.71□□□□□ -1.18
CCL28-204ENST00000514421 GIMAP4Q9NUV9 329 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 OLAHQ9NV23 265 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 MYOTQ9UBF9 498 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 ZNF639Q9UID6 485 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 UTS2RQ9UKP6 389 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 ERVK-11Q9UQG0 969 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 PCDHGB6Q9Y5F9 930 aa7.71□□□□□ -1.18
CCL28-204ENST00000514421 A0A1W2PS29 197 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 OR6C76A6NM76 312 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 MYO1GB0I1T2 1018 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 HRKO00198 91 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 RNASET2O00584 256 aaKnown RBP7.7□□□□□ -1.18
CCL28-204ENST00000514421 PRKNO60260 465 aaPredicted RBP7.7□□□□□ -1.18
CCL28-204ENST00000514421 ITGA10O75578 1167 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 F10P00742 488 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 ATP1B1P05026 303 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 UQCRBP14927 111 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 CD46P15529 392 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 S1PR1P21453 382 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 PSMA4P25789 261 aaKnown RBP7.7□□□□□ -1.18
CCL28-204ENST00000514421 HPCAL1P37235 193 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 MLLT10P55197 1068 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 MTPNP58546 118 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 LSM11P83369 360 aaKnown RBP eCLIP7.7□□□□□ -1.18
CCL28-204ENST00000514421 OC90Q02509 493 aaPredicted RBP7.7□□□□□ -1.18
CCL28-204ENST00000514421 TLE1Q04724 770 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 MGAT2Q10469 447 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 BLMHQ13867 455 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 INPP5JQ15735 1006 aaPredicted RBP7.7□□□□□ -1.18
CCL28-204ENST00000514421 CEBPEQ15744 281 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 MPEG1Q2M385 716 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 PRICKLE4Q2TBC4 344 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 ANXA8L1Q5VT79 327 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 LPCAT4Q643R3 524 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 SPINK14Q6IE38 97 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 SLC25A25Q6KCM7 469 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 HMBOX1Q6NT76 420 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 PPP4R4Q6NUP7 873 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 FAM111BQ6SJ93 734 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 CYP2R1Q6VVX0 501 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 SLC29A4Q7RTT9 530 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 SPPL2CQ8IUH8 684 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 LRRC25Q8N386 305 aaPredicted RBP7.7□□□□□ -1.18
CCL28-204ENST00000514421 CISD2Q8N5K1 135 aaKnown RBP7.7□□□□□ -1.18
CCL28-204ENST00000514421 TMEM156Q8N614 296 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 OR2T12Q8NG77 320 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 OR7G1Q8NGA0 311 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 CLHC1Q8NHS4 586 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 CDC26Q8NHZ8 85 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 NUBPLQ8TB37 319 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 CPT1CQ8TCG5 803 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 EXOSC8Q96B26 276 aaKnown RBP7.7□□□□□ -1.18
CCL28-204ENST00000514421 REXO5Q96IC2 774 aaKnown RBP7.7□□□□□ -1.18
CCL28-204ENST00000514421 ZNF597Q96LX8 424 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 BBS4Q96RK4 519 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 PRPF18Q99633 342 aaKnown RBP7.7□□□□□ -1.18
CCL28-204ENST00000514421 TRIM8Q9BZR9 551 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 OR10A5Q9H207 317 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 LIN28AQ9H9Z2 209 aaKnown RBP7.7□□□□□ -1.18
CCL28-204ENST00000514421 MIEF1Q9NQG6 463 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 LUZP4Q9P127 313 aa7.7□□□□□ -1.18
CCL28-204ENST00000514421 LRFN1Q9P244 771 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms