RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 CMAHPQ9Y471 501 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 FKBP7Q9Y680 259 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 KDM4EB2RXH2 506 aaPredicted RBP6.96□□□□□ -1.3
CLIP1-205ENST00000514271 RNASET2O00584 256 aaKnown RBP6.96□□□□□ -1.3
CLIP1-205ENST00000514271 VEGFDO43915 354 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 B4GALT2O60909 372 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 PPM1BO75688 479 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 SLC22A5O76082 557 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 PCDH8O95206 1070 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 IGHV4-34P06331 123 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 ZNF3P17036 446 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 LPOP22079 712 aaPredicted RBP6.96□□□□□ -1.3
CLIP1-205ENST00000514271 HTR2BP41595 481 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 TAS2R38P59533 333 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 PTGES3Q15185 160 aaKnown RBP6.96□□□□□ -1.3
CLIP1-205ENST00000514271 SYT16Q17RD7 645 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 MINDY4Q4G0A6 757 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 IKBIPQ70UQ0 350 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 GALNTL5Q7Z4T8 443 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 TECPR1Q7Z6L1 1165 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 C1orf216Q8TAB5 229 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 WDR48Q8TAF3 677 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 COL26A1Q96A83 441 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 CXorf40BQ96DE9 158 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 KLHDC7BQ96G42 594 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 HSPA12BQ96MM6 686 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 FEVQ99581 238 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 MMP28Q9H239 520 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 TRIM45Q9H8W5 580 aaPredicted RBP6.96□□□□□ -1.3
CLIP1-205ENST00000514271 ZFYVE1Q9HBF4 777 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 SARS2Q9NP81 518 aaKnown RBP6.96□□□□□ -1.3
CLIP1-205ENST00000514271 EMC7Q9NPA0 242 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 FAM120CQ9NX05 1096 aaKnown RBP6.96□□□□□ -1.3
CLIP1-205ENST00000514271 PCDHB9Q9Y5E1 797 aa6.96□□□□□ -1.3
CLIP1-205ENST00000514271 A0A1W2PR77 199 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 HNRNPCL2B2RXH8 293 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 FAM25AB3EWG3 89 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 FAM25CB3EWG5 89 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 FAM25GB3EWG6 89 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 THEGLP0DJG4 465 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 OR12D1P0DN82 309 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 ALPPL2P10696 532 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 DBTP11182 482 aaKnown RBP6.95□□□□□ -1.3
CLIP1-205ENST00000514271 IDSP22304 550 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 SPAM1P38567 509 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 PFN3P60673 137 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 LSM3P62310 102 aaKnown RBP6.95□□□□□ -1.3
CLIP1-205ENST00000514271 IL5RAQ01344 420 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 RUNX1T1Q06455 604 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 CSTF3Q12996 717 aaKnown RBP6.95□□□□□ -1.3
CLIP1-205ENST00000514271 LAPTM4AQ15012 233 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 MAPKAPK3Q16644 382 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 SHEQ5VZ18 495 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 CERS6Q6ZMG9 384 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 RAB43Q86YS6 212 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 CDYL2Q8N8U2 506 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 SNAPC3Q92966 411 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 FAM120BQ96EK7 910 aaKnown RBP6.95□□□□□ -1.3
CLIP1-205ENST00000514271 DUSP23Q9BVJ7 150 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 HDHD5Q9BXW7 423 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 TPSD1Q9BZJ3 242 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 SLC22A4Q9H015 551 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 EXOSC3Q9NQT5 275 aaKnown RBP6.95□□□□□ -1.3
CLIP1-205ENST00000514271 PDP1Q9P0J1 537 aaPredicted RBP6.95□□□□□ -1.3
CLIP1-205ENST00000514271 B4GALT6Q9UBX8 382 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 SEC14L4Q9UDX3 406 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 NUFIP1Q9UHK0 495 aaKnown RBP6.95□□□□□ -1.3
CLIP1-205ENST00000514271 SLC6A5Q9Y345 797 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 THADAQ6YHU6 1953 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 CACNA1IQ9P0X4 2223 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 EFCAB10A6NFE3 127 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 H0YIV9 168 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 BRINP1O60477 761 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 AP2A2O94973 939 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 GOSR1O95249 250 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 ALPIP09923 528 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 CBSLP0DN79 551 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 C6P13671 934 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 UGT2B7P16662 529 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 CBSP35520 551 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 TRIM23P36406 574 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 ARRB1P49407 418 aaPredicted RBP6.95□□□□□ -1.3
CLIP1-205ENST00000514271 NFATC4Q14934 902 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 LGALSLQ3ZCW2 172 aaPredicted RBP6.95□□□□□ -1.3
CLIP1-205ENST00000514271 C10orf91Q5T1B1 145 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 GPR32P1Q8NGA4 272 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 DNAJA4Q8WW22 397 aaPredicted RBP6.95□□□□□ -1.3
CLIP1-205ENST00000514271 SCARF2Q96GP6 870 aaPredicted RBP6.95□□□□□ -1.3
CLIP1-205ENST00000514271 APIPQ96GX9 242 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 SMIM14Q96QK8 99 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 FERD3LQ96RJ6 166 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 WFDC6Q9BQY6 131 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 AIFM2Q9BRQ8 373 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 ARHGAP9Q9BRR9 750 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 TEX101Q9BY14 249 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 BRF2Q9HAW0 419 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 SCN3BQ9NY72 215 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 GLTPQ9NZD2 209 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 CLEC2DQ9UHP7 191 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 FIS1Q9Y3D6 152 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms