RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 IFI6P09912 130 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 ALOX5P09917 674 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 NPIPA8P0DM63 369 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 HOXB9P17482 250 aaPredicted RBP9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 DRD5P21918 477 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 MATN1P21941 496 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 UQCRC2P22695 453 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 TRHRP34981 398 aaPredicted RBP9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 RFC3P40938 356 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 PRIM2P49643 509 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 NRG3P56975 720 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 CAPRIN1Q14444 709 aaKnown RBP9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 ZNF169Q14929 603 aaPredicted RBP9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 ZNHIT3Q15649 155 aaPredicted RBP9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 ZNF791Q3KP31 576 aaPredicted RBP9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 ZNF766Q5HY98 468 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 SAXO2Q658L1 398 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 REP15Q6BDI9 236 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 CDC73Q6P1J9 531 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 OPN5Q6U736 354 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 IGFL3Q6UXB1 125 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 Q6ZS92 163 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 MSANTD1Q6ZTZ1 278 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 GALNTL5Q7Z4T8 443 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 PIGWQ7Z7B1 504 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 HMGN2P46Q86SG4 172 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 DHDDSQ86SQ9 333 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 RNF130Q86XS8 419 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 SLC34A3Q8N130 599 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 C10orf111Q8N326 155 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 BCORP1Q8N888 145 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 COX18Q8N8Q8 333 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 CDRT4Q8N9R6 151 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 GOT1L1Q8NHS2 421 aaPredicted RBP9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 HAS2Q92819 552 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 RAB8BQ92930 207 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 C5orf34Q96MH7 638 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 ADOQ96SZ5 270 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 SLC39A3Q9BRY0 314 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 ACTRT3Q9BYD9 372 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 RNF32Q9H0A6 362 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 OR51I1Q9H343 314 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 RMND5AQ9H871 391 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 Q9N2J8 555 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 FBXO34Q9NWN3 711 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 GIN1Q9NXP7 522 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 SLC25A37Q9NYZ2 338 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 MAP10Q9P2G4 905 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 PCDHGB7Q9Y5F8 929 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 HRH3Q9Y5N1 445 aa9.02□□□□□ -0.97
TOPBP1-209ENST00000513818 A0A096LPI6 279 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 LOC100653049A0A140TA62 436 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 A0A1W2PP18 115 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 ACOX3O15254 700 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 TSPAN2O60636 221 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 CCDC22O60826 627 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 ICOSLGO75144 302 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 REM1O75628 298 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 PPM1BO75688 479 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 KRT34O76011 436 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 FAM107AO95990 144 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 OR12D1P0DN82 309 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 CYP4B1P13584 511 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 IL12BP29460 328 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 PIGAP37287 484 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 MAP3K8P41279 467 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 CPA2P48052 419 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 DNASE1L1P49184 302 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 MAN2A2P49641 1150 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 KHKP50053 298 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 DCAF7P61962 342 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 MRPS22P82650 360 aaKnown RBP9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 FUT5Q11128 374 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 KLRB1Q12918 225 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 NFYCQ13952 458 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 SELPLGQ14242 412 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 EXOSC6Q5RKV6 272 aaKnown RBP9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 RTL4Q6ZR62 310 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 JAZF1Q86VZ6 243 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 HORMAD2Q8N7B1 307 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 PSD4Q8NDX1 1056 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 C17orf47Q8NEP4 570 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 ZFP90Q8TF47 636 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 TP53INP1Q96A56 240 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 PNPLA2Q96AD5 504 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 MOAP1Q96BY2 351 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 RCN3Q96D15 328 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 NEURL3Q96EH8 262 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 WBP1Q96G27 269 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 SLC35A4Q96G79 324 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 SCMH1Q96GD3 660 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 NODALQ96S42 347 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 CCDC106Q9BWC9 280 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 MYLK2Q9H1R3 596 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 IKZF5Q9H5V7 419 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 DEPPQ9NTK1 212 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 VAPAQ9P0L0 249 aa9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.01□□□□□ -0.97
TOPBP1-209ENST00000513818 LEF1Q9UJU2 399 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms