RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 OR56B4Q8NH76 319 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 ST8SIA4Q92187 359 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 MCHR1Q99705 422 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 TCEAL7Q9BRU2 100 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 POTEKPQ9BYX7 375 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 ERVMER34-1Q9H9K5 563 aa10.67□□□□□ -0.7
TCOF1-211ENST00000513346 TRAPPC13A5PLN9 417 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 POM121CA8CG34 1229 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 ARPC1BO15143 372 aaKnown RBP10.66□□□□□ -0.7
TCOF1-211ENST00000513346 SCO1O75880 301 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 RPP14O95059 124 aaKnown RBP10.66□□□□□ -0.7
TCOF1-211ENST00000513346 LDOC1O95751 146 aaPredicted RBP10.66□□□□□ -0.7
TCOF1-211ENST00000513346 LALBAP00709 142 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 TNFP01375 233 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 MRPL3P09001 348 aaKnown RBP10.66□□□□□ -0.7
TCOF1-211ENST00000513346 ADRA1AP35348 466 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 MAP3K8P41279 467 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 STK19P49842 368 aaPredicted RBP10.66□□□□□ -0.7
TCOF1-211ENST00000513346 CAV3P56539 151 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 ACTC1P68032 377 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 ACTA1P68133 377 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 S100A12P80511 92 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 RHEBQ15382 184 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 DUSP7Q16829 419 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 KLHL26Q53HC5 615 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 PLEKHS1Q5SXH7 462 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 KCTD9Q7L273 389 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 SSX6Q7RTT6 188 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 MRPL10Q7Z7H8 261 aaKnown RBP10.66□□□□□ -0.7
TCOF1-211ENST00000513346 ARHGAP12Q8IWW6 846 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 ELL3Q9HB65 397 aaPredicted RBP10.66□□□□□ -0.7
TCOF1-211ENST00000513346 ADAP2Q9NPF8 381 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 WBP1LQ9NX94 342 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 SPTBN2O15020 2390 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 TNRC6CQ9HCJ0 1690 aaKnown RBP10.66□□□□□ -0.7
TCOF1-211ENST00000513346 hCG_1807616A0A1W2PRN6 198 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 F5H5P2 479 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 MAN2B1O00754 1011 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 SLC16A5O15375 505 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 PRAMEF2O60811 474 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 LEFTY1O75610 366 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 DLX5P56178 289 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 DOC2AQ14183 400 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 OCLNQ16625 522 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 PLK5Q496M5 336 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 TMIGD1Q6UXZ0 262 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 WDR53Q7Z5U6 358 aaPredicted RBP10.66□□□□□ -0.7
TCOF1-211ENST00000513346 BPHLQ86WA6 291 aaPredicted RBP10.66□□□□□ -0.7
TCOF1-211ENST00000513346 TEX26Q8N6G2 289 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 OR8S1Q8NH09 359 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 NTMT1Q9BV86 223 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 RDH14Q9HBH5 336 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 PLCXD1Q9NUJ7 323 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 TAC3Q9UHF0 121 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 GJD2Q9UKL4 321 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 E2F3O00716 465 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 XKRYO14609 159 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 AKR7A2O43488 359 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 FARS2O95363 451 aaKnown RBP10.66□□□□□ -0.7
TCOF1-211ENST00000513346 GCGRP47871 477 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 ALKAL2Q6UX46 152 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 ACPTQ9BZG2 426 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 METTL8Q9H825 291 aaKnown RBP10.66□□□□□ -0.7
TCOF1-211ENST00000513346 PCDHGA6Q9Y5G7 932 aa10.66□□□□□ -0.7
TCOF1-211ENST00000513346 GFRA2O00451 464 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 GKN3PP0CG01 181 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 BDKRB1P46663 353 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 CDKN1CP49918 316 aaPredicted RBP10.65□□□□□ -0.7
TCOF1-211ENST00000513346 ERVFC1P60507 584 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 DUSP6Q16828 381 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 ANKRD34AQ69YU3 496 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 SLC16A12Q6ZSM3 486 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 GALNTL5Q7Z4T8 443 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.65□□□□□ -0.79e-8■□□□□ 9.8
TCOF1-211ENST00000513346 LSMEM1Q8N8F7 131 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 ARL11Q969Q4 196 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 C7orf34Q96L11 122 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 CNTNAP3BQ96NU0 1288 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 DCLRE1CQ96SD1 692 aaKnown RBP10.65□□□□□ -0.7
TCOF1-211ENST00000513346 TAS2R8Q9NYW2 309 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 FBXL3Q9UKT7 428 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 USP3Q9Y6I4 520 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 CPED1A4D0V7 1026 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 TMEM150CB9EJG8 249 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 AGR2O95994 175 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 CA3P07451 260 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 OR12D1P0DN82 309 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 ACPPP15309 386 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 ARHGDIBP52566 201 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 RAB33AQ14088 237 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 LASP1Q14847 261 aaKnown RBP10.65□□□□□ -0.7
TCOF1-211ENST00000513346 BCL2A1Q16548 175 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 COX18Q8N8Q8 333 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 ZNF454Q8N9F8 522 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 FBXO15Q8NCQ5 510 aaPredicted RBP10.65□□□□□ -0.7
TCOF1-211ENST00000513346 CASTOR1Q8WTX7 329 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 GIMAP1Q8WWP7 306 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 SCAMP4Q969E2 229 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 GAL3ST3Q96A11 431 aa10.65□□□□□ -0.7
TCOF1-211ENST00000513346 ARL5BQ96KC2 179 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms