RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 TRMT61AQ96FX7 289 aaKnown RBP17.03■□□□□ 0.32
HMGCS1-206ENST00000511774 MRPL1Q9BYD6 325 aaKnown RBP17.03■□□□□ 0.32
HMGCS1-206ENST00000511774 ACTR6Q9GZN1 396 aa17.03■□□□□ 0.32
HMGCS1-206ENST00000511774 CFL2Q9Y281 166 aa17.03■□□□□ 0.32
HMGCS1-206ENST00000511774 MEGF8Q7Z7M0 2845 aa17.03■□□□□ 0.32
HMGCS1-206ENST00000511774 OR2M5A3KFT3 312 aa17.02■□□□□ 0.32
HMGCS1-206ENST00000511774 KERAO60938 352 aa17.02■□□□□ 0.32
HMGCS1-206ENST00000511774 ARL4CP56559 192 aa17.02■□□□□ 0.32
HMGCS1-206ENST00000511774 FAPQ12884 760 aa17.02■□□□□ 0.32
HMGCS1-206ENST00000511774 PGGHGQ32M88 737 aa17.02■□□□□ 0.32
HMGCS1-206ENST00000511774 RAET1LQ5VY80 246 aa17.02■□□□□ 0.32
HMGCS1-206ENST00000511774 ALKBH2Q6NS38 261 aa17.02■□□□□ 0.32
HMGCS1-206ENST00000511774 SLC48A1Q6P1K1 146 aa17.02■□□□□ 0.32
HMGCS1-206ENST00000511774 MILR1Q7Z6M3 343 aa17.02■□□□□ 0.32
HMGCS1-206ENST00000511774 OR4K17Q8NGC6 315 aa17.02■□□□□ 0.32
HMGCS1-206ENST00000511774 NAP1L3Q99457 506 aaPredicted RBP17.02■□□□□ 0.32
HMGCS1-206ENST00000511774 RBBP8Q99708 897 aa17.02■□□□□ 0.32
HMGCS1-206ENST00000511774 FLRT3Q9NZU0 649 aa17.02■□□□□ 0.32
HMGCS1-206ENST00000511774 MED11Q9P086 117 aa17.02■□□□□ 0.32
HMGCS1-206ENST00000511774 PCDHA9Q9Y5H5 950 aa17.02■□□□□ 0.32
HMGCS1-206ENST00000511774 IGHV4-30-2A0A087WSY4 118 aa17.01■□□□□ 0.31
HMGCS1-206ENST00000511774 SHISA8B8ZZ34 492 aa17.01■□□□□ 0.31
HMGCS1-206ENST00000511774 E7ESA3 106 aa17.01■□□□□ 0.31
HMGCS1-206ENST00000511774 H3BML4 177 aa17.01■□□□□ 0.31
HMGCS1-206ENST00000511774 FOXE1O00358 373 aaPredicted RBP17.01■□□□□ 0.31
HMGCS1-206ENST00000511774 ABCB7O75027 752 aa17.01■□□□□ 0.31
HMGCS1-206ENST00000511774 ERAL1O75616 437 aaKnown RBP17.01■□□□□ 0.31
HMGCS1-206ENST00000511774 SEMA3DO95025 777 aa17.01■□□□□ 0.31
HMGCS1-206ENST00000511774 CD8AP01732 235 aa17.01■□□□□ 0.31
HMGCS1-206ENST00000511774 HK1P19367 917 aa17.01■□□□□ 0.31
HMGCS1-206ENST00000511774 RAB10P61026 200 aa17.01■□□□□ 0.31
HMGCS1-206ENST00000511774 METTL25Q8N6Q8 603 aa17.01■□□□□ 0.31
HMGCS1-206ENST00000511774 L3MBTL4Q8NA19 623 aa17.01■□□□□ 0.31
HMGCS1-206ENST00000511774 OR4N2Q8NGD1 307 aa17.01■□□□□ 0.31
HMGCS1-206ENST00000511774 SMAP2Q8WU79 429 aaPredicted RBP17.01■□□□□ 0.31
HMGCS1-206ENST00000511774 EFHD2Q96C19 240 aaPredicted RBP17.01■□□□□ 0.31
HMGCS1-206ENST00000511774 CNRIP1Q96F85 164 aaPredicted RBP17.01■□□□□ 0.31
HMGCS1-206ENST00000511774 ZNF681Q96N22 645 aa17.01■□□□□ 0.31
HMGCS1-206ENST00000511774 BTBD9Q96Q07 612 aa17.01■□□□□ 0.31
HMGCS1-206ENST00000511774 CDK15Q96Q40 435 aa17.01■□□□□ 0.31
HMGCS1-206ENST00000511774 OSBPL9Q96SU4 736 aa17.01■□□□□ 0.31
HMGCS1-206ENST00000511774 NSMCE4AQ9NXX6 385 aa17.01■□□□□ 0.31
HMGCS1-206ENST00000511774 SCO2O43819 266 aa17■□□□□ 0.31
HMGCS1-206ENST00000511774 SSTR1P30872 391 aa17■□□□□ 0.31
HMGCS1-206ENST00000511774 FGFBP1Q14512 234 aa17■□□□□ 0.31
HMGCS1-206ENST00000511774 TSC22D1Q15714 1073 aa17■□□□□ 0.31
HMGCS1-206ENST00000511774 CPEB4Q17RY0 729 aaKnown RBP eCLIP17■□□□□ 0.31
HMGCS1-206ENST00000511774 LARP4Q71RC2 724 aaKnown RBP eCLIP17■□□□□ 0.31
HMGCS1-206ENST00000511774 GOLGA7Q7Z5G4 137 aa17■□□□□ 0.31
HMGCS1-206ENST00000511774 GGNQ86UU5 652 aa17■□□□□ 0.31
HMGCS1-206ENST00000511774 OR6K3Q8NGY3 331 aa17■□□□□ 0.31
HMGCS1-206ENST00000511774 FBXW5Q969U6 566 aa17■□□□□ 0.31
HMGCS1-206ENST00000511774 GTPBP3Q969Y2 492 aaKnown RBP17■□□□□ 0.31
HMGCS1-206ENST00000511774 LRRC1Q9BTT6 524 aa17■□□□□ 0.31
HMGCS1-206ENST00000511774 ZBTB26Q9HCK0 441 aa17■□□□□ 0.31
HMGCS1-206ENST00000511774 CDC42EP3Q9UKI2 254 aa17■□□□□ 0.31
HMGCS1-206ENST00000511774 JRKLQ9Y4A0 524 aa17■□□□□ 0.31
HMGCS1-206ENST00000511774 RNF115Q9Y4L5 304 aa17■□□□□ 0.31
HMGCS1-206ENST00000511774 CLOCKO15516 846 aa16.99■□□□□ 0.31
HMGCS1-206ENST00000511774 SEC31AO94979 1220 aaKnown RBP16.99■□□□□ 0.31
HMGCS1-206ENST00000511774 PHEXP78562 749 aa16.99■□□□□ 0.31
HMGCS1-206ENST00000511774 TMEM249Q2WGJ8 235 aa16.99■□□□□ 0.31
HMGCS1-206ENST00000511774 NCMAPQ5T1S8 102 aa16.99■□□□□ 0.31
HMGCS1-206ENST00000511774 CCNYL2Q5T2Q4 361 aa16.99■□□□□ 0.31
HMGCS1-206ENST00000511774 SEZ6L2Q6UXD5 910 aa16.99■□□□□ 0.31
HMGCS1-206ENST00000511774 ARIH2OSQ8N7S6 290 aa16.99■□□□□ 0.31
HMGCS1-206ENST00000511774 GBP7Q8N8V2 638 aaPredicted RBP16.99■□□□□ 0.31
HMGCS1-206ENST00000511774 NXNL1Q96CM4 212 aa16.99■□□□□ 0.31
HMGCS1-206ENST00000511774 VSTM2LQ96N03 204 aa16.99■□□□□ 0.31
HMGCS1-206ENST00000511774 SERPINI1Q99574 410 aa16.99■□□□□ 0.31
HMGCS1-206ENST00000511774 NTMT1Q9BV86 223 aa16.99■□□□□ 0.31
HMGCS1-206ENST00000511774 PPP4R1LQ9P1A2 415 aa16.99■□□□□ 0.31
HMGCS1-206ENST00000511774 WHRNQ9P202 907 aa16.99■□□□□ 0.31
HMGCS1-206ENST00000511774 PRODH2Q9UF12 536 aa16.99■□□□□ 0.31
HMGCS1-206ENST00000511774 ANGPTL3Q9Y5C1 460 aa16.99■□□□□ 0.31
HMGCS1-206ENST00000511774 GOLGA6L10A0A0M3HER8 536 aa16.98■□□□□ 0.31
HMGCS1-206ENST00000511774 SS18L1O75177 396 aaPredicted RBP16.98■□□□□ 0.31
HMGCS1-206ENST00000511774 SIX3O95343 332 aaPredicted RBP16.98■□□□□ 0.31
HMGCS1-206ENST00000511774 CSNK2A2P19784 350 aaPredicted RBP16.98■□□□□ 0.31
HMGCS1-206ENST00000511774 IL11P20809 199 aa16.98■□□□□ 0.31
HMGCS1-206ENST00000511774 PTNP21246 168 aa16.98■□□□□ 0.31
HMGCS1-206ENST00000511774 EVI2BP34910 448 aa16.98■□□□□ 0.31
HMGCS1-206ENST00000511774 EEFSECP57772 596 aaKnown RBP16.98■□□□□ 0.31
HMGCS1-206ENST00000511774 GTF2H2Q13888 395 aa16.98■□□□□ 0.31
HMGCS1-206ENST00000511774 EFR3AQ14156 821 aa16.98■□□□□ 0.31
HMGCS1-206ENST00000511774 SLMAPQ14BN4 828 aa16.98■□□□□ 0.31
HMGCS1-206ENST00000511774 PFKFB4Q16877 469 aa16.98■□□□□ 0.31
HMGCS1-206ENST00000511774 ZNF672Q499Z4 452 aaPredicted RBP16.98■□□□□ 0.31
HMGCS1-206ENST00000511774 ZNF628Q5EBL2 1059 aa16.98■□□□□ 0.31
HMGCS1-206ENST00000511774 GTF2H2CQ6P1K8 395 aa16.98■□□□□ 0.31
HMGCS1-206ENST00000511774 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.98■□□□□ 0.31
HMGCS1-206ENST00000511774 ZBED8Q8IZ13 594 aa16.98■□□□□ 0.31
HMGCS1-206ENST00000511774 CENPLQ8N0S6 344 aaPredicted RBP16.98■□□□□ 0.31
HMGCS1-206ENST00000511774 KBTBD8Q8NFY9 601 aa16.98■□□□□ 0.31
HMGCS1-206ENST00000511774 KAT2AQ92830 837 aa16.98■□□□□ 0.31
HMGCS1-206ENST00000511774 S100PBPQ96BU1 408 aa16.98■□□□□ 0.31
HMGCS1-206ENST00000511774 TM4SF18Q96CE8 201 aa16.98■□□□□ 0.31
HMGCS1-206ENST00000511774 KLHL29Q96CT2 875 aa16.98■□□□□ 0.31
HMGCS1-206ENST00000511774 NPAS1Q99742 590 aa16.98■□□□□ 0.31
HMGCS1-206ENST00000511774 TRAF4Q9BUZ4 470 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms